EWM25284.1, cds5389 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM25284.1 vs. NCBI_GenBank
Match: gi|585107028|gb|EWM25284.1| (patatin-like serine [Nannochloropsis gaditana]) HSP 1 Score: 779.245 bits (2011), Expect = 0.000e+0 Identity = 377/377 (100.00%), Postives = 377/377 (100.00%), Query Frame = 0 Query: 1 MVGYEKRYDQRFLLLPRWPRIAGNRTRFSIPAAMASDRGTGPGVLFAIDKGVQQLISSLSETGARLGRVRDVDIHRLGYLVDRLLESLHHNLPEAERLLYSWADTIFAPKVVLRQYLMALGLEMTLFIYHLCYRLGARLVNRMTVKGRQISETRRRMAKAKNYYEWLKCAERMDELEGKNRWREVPESTLYNHRMLQEKINQFNNMMQNGDVFQLMFVLRGGISRNQFGLLNEGLYQHAYSGTKKIVERYLEVVVKALNFVCDVNPSLDNISADVKLAFFNETRHAFGRTALLLSGGAGLGFYHVGFVKALFDQGILPRVLSGASAGSIISSMIGVRTDDELYAMFTDGIARLDFFKLYKRRTKAAAAATATSGAGC 377 MVGYEKRYDQRFLLLPRWPRIAGNRTRFSIPAAMASDRGTGPGVLFAIDKGVQQLISSLSETGARLGRVRDVDIHRLGYLVDRLLESLHHNLPEAERLLYSWADTIFAPKVVLRQYLMALGLEMTLFIYHLCYRLGARLVNRMTVKGRQISETRRRMAKAKNYYEWLKCAERMDELEGKNRWREVPESTLYNHRMLQEKINQFNNMMQNGDVFQLMFVLRGGISRNQFGLLNEGLYQHAYSGTKKIVERYLEVVVKALNFVCDVNPSLDNISADVKLAFFNETRHAFGRTALLLSGGAGLGFYHVGFVKALFDQGILPRVLSGASAGSIISSMIGVRTDDELYAMFTDGIARLDFFKLYKRRTKAAAAATATSGAGC Sbjct: 1 MVGYEKRYDQRFLLLPRWPRIAGNRTRFSIPAAMASDRGTGPGVLFAIDKGVQQLISSLSETGARLGRVRDVDIHRLGYLVDRLLESLHHNLPEAERLLYSWADTIFAPKVVLRQYLMALGLEMTLFIYHLCYRLGARLVNRMTVKGRQISETRRRMAKAKNYYEWLKCAERMDELEGKNRWREVPESTLYNHRMLQEKINQFNNMMQNGDVFQLMFVLRGGISRNQFGLLNEGLYQHAYSGTKKIVERYLEVVVKALNFVCDVNPSLDNISADVKLAFFNETRHAFGRTALLLSGGAGLGFYHVGFVKALFDQGILPRVLSGASAGSIISSMIGVRTDDELYAMFTDGIARLDFFKLYKRRTKAAAAATATSGAGC 377
BLAST of EWM25284.1 vs. NCBI_GenBank
Match: gi|299117213|emb|CBN75175.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 284.263 bits (726), Expect = 1.377e-84 Identity = 139/291 (47.77%), Postives = 196/291 (67.35%), Query Frame = 0 Query: 77 LGYLVDRLLESLHHNLPEAERLLYSWADTIFAPKVVLRQYLMALGLEMTLFIYHLCYRLGARLVNRMTVKGRQISETRRRMAKAKNYYEWLKCAERMDELEGKNRWREVPESTLYNHRMLQEKINQFNNMMQNGDVFQLMFVLRGGISRNQFGLLNEGLYQHAYSGTKKIVERYLEVVVKALNFVCDVNPSLDNISADVKLAFFNETRHAFGRTALLLSGGAGLGFYHVGFVKALFDQGILPRVLSGASAGSIISSMIGVRTDDELYAMFTDGIARLDFFKLYKRRTKAAA 367 +G + D +L+ + +P E DTIFAP++VLR ++A+ L+ L Y+ + RL++R++ + + R +M AKNY EW AER+D LEG + WR+ P+S LYNH++LQ++I+ N M+ DVF LMF LR +SRNQ G+L+EGL+ A++GTK +VERY EVV +AL++VC N +I D KLAFFNETRHA+GRTAL+LSGGA +G YH G VKAL ++ +LPRV+SGASAGSI+++M+G RTD EL MF L+FF+ +R K + Sbjct: 8 IGEVADAVLKHVSDRMPGLEAFTLEILDTIFAPRLVLRHLMVAVALQTGLLTYNGLVVVANRLLSRLSTRHGEAKAYRHKMRTAKNYEEWRMYAERVDHLEGHDEWRKRPDSLLYNHKVLQQQISDLNAMINAEDVFGLMFRLRCSLSRNQHGMLHEGLFSRAHAGTKVLVERYHEVVCEALHYVCAKNAVAQDIPTDAKLAFFNETRHAYGRTALMLSGGAAMGVYHAGVVKALLERKLLPRVVSGASAGSIVAAMVGTRTDAELRPMFDGKGVNLEFFQPLRRSFKKTS 298
BLAST of EWM25284.1 vs. NCBI_GenBank
Match: gi|224005855|ref|XP_002291888.1| (predicted protein, partial [Thalassiosira pseudonana CCMP1335] >gi|220972407|gb|EED90739.1| predicted protein, partial [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 241.506 bits (615), Expect = 2.687e-72 Identity = 117/277 (42.24%), Postives = 177/277 (63.90%), Query Frame = 0 Query: 71 DVDIHRLGYLVDRLLE----SLHHNLPEAERLLYSWADTIFAPKVVLRQYLMALGLEMTLFIYHLCYRLGARLVNRMTVKGRQISETRRRMAKAKNYYEWLKCAERMDELEGKNRWREVPESTLYNHRMLQEKINQFNNMMQNGDVFQLMFVLRGGISRNQFGLLNEGLYQHAYSGTKKIVERYLEVVVKALNFVCD--VNPSLDNISADVKLAFFNETRHAFGRTALLLSGGAGLGFYHVGFVKALFDQGILPRVLSGASAGSIISSMIGVRTDDE 341 D+D ++ RLLE ++ NLPE +RLL+ D +F PK + Q+++A+ LE ++ + + + L ++ R I + + + + EW+ AE++D ++G + WR LY +Q +I++ ++M+ D+F LMF LRGGI RN FGLL+EGL+ A +G+K ++E Y VV AL+FVCD V P+ D I D +LAFFNETRH++GRTA L SGGA LGFYHVG VKAL + G++PRVL G+SAGS++++++ RTD+E Sbjct: 4 DMDSTEFEAMIRRLLEDAANTMIANLPELKRLLFEALDVVFIPKQIASQFILAVALESSMVTVNQLFHILRLLSASISTHSRLIRQLHSQQRISDSQDEWMDLAEQIDNIQGNDVWRTEKTCALYESERIQARIDELVHLMRRRDIFDLMFTLRGGIGRNHFGLLHEGLFSRAMAGSKLLIETYHNVVCAALDFVCDAPVAPNDDPIPNDSRLAFFNETRHSYGRTAFLCSGGAALGFYHVGVVKALMENGLMPRVLGGSSAGSVVTAIVATRTDEE 280
BLAST of EWM25284.1 vs. NCBI_GenBank
Match: gi|397644655|gb|EJK76491.1| (hypothetical protein THAOC_01748 [Thalassiosira oceanica]) HSP 1 Score: 236.498 bits (602), Expect = 1.849e-66 Identity = 124/317 (39.12%), Postives = 195/317 (61.51%), Query Frame = 0 Query: 57 SSLSETGARLGRVRDVDIHRLGYLVDRLL----ESLHHNLPEAERLLYSWADTIFAPKVVLRQYLMALGLEMTLFIYHLCYRLGARLVNRMTVKGRQISETRRRMAKAKNYYEWLKCAERMDELEGKNRWREVPESTLYNHRMLQEKINQFNNMMQNGDVFQLMFVLRGGISRNQFGLLNEGLYQHAYSGTKKIVERYLEVVVKALNFVCD--VNPSLDNISADVKLAFFNETRHAFGRTALLLSGGAGLGFYHVGFVKALFDQGILPRVLSGASAGSIISSMIGVRTDDELYAMF-----TDGIAR-----LDFFK 357 SSLS +G + D+ H++ LV +++ E++ +LPE ++++ + D +F PK + Q ++AL LE ++ + +++ + + ++ R I + + + A EW+ AE++D ++G + WR + LY +Q +I++ ++M+ D+F LMF LRGGI RN FGLL+EGL+ A +G+K ++E Y VV AL+FVCD V P+ + I + +LAFFNETRH++GRTA L SGGA LGFYHVG VKAL G++PRVL G+SAGSI++ +I RTD+E + F TD + DFF+ Sbjct: 135 SSLSLSGKQNKMKIDLTSHQMEDLVKQVVHEAAETILQHLPEMQKVMDT-LDIVFMPKQIASQLVIALALETSMVTVNQLWQIFRYIASSISTHSRLIRQLKDQQTTASTQDEWMDLAEQIDNIQGNDSWRTERKCPLYESDRIQARIDELVHLMRRRDIFDLMFTLRGGIGRNHFGLLHEGLFSRAMAGSKLLIETYHNVVCAALDFVCDAPVAPNDEPIPNESRLAFFNETRHSYGRTAFLCSGGAALGFYHVGVVKALMKNGLMPRVLGGSSAGSIVTGIIATRTDEECFKDFFEVEGTDALGHSGKIMTDFFR 450
BLAST of EWM25284.1 vs. NCBI_GenBank
Match: gi|1210518354|dbj|GAX22768.1| (TAG lipase / steryl ester hydrolase / phospholipase A2 / LPA acyltransferase [Fistulifera solaris]) HSP 1 Score: 233.417 bits (594), Expect = 1.029e-65 Identity = 124/294 (42.18%), Postives = 178/294 (60.54%), Query Frame = 0 Query: 81 VDRLLESLHHNLPEAERLLYSWADTIFAPKVVLRQYLMALGLEMTLFIYHLCYRLGARLVNRMTVKGRQISETRRRMAKAKNYYEWLKCAERMDELEGKNRWREVPESTLYNHRMLQEKINQFNNMMQNGDVFQLMFVLRGGISRNQFGLLNEGLYQHAYSGTKKIVERYLEVVVKALNFVCD--VNPSLDNISADVKLAFFNETRHAFGRTALLLSGGAGLGFYHVGFVKALFDQGILPRVLSGASAGSIISSMIGVRTDDEL----------YAMFTDGIARLDFFKLYKRR 362 +D + L +P +++ DTI APKVV +Q ++ L LE L L + L + ++ + R + + +++ EW++ AERMD+++G + WR P LY + +I++F ++M+ D+F+LMFVLRG I RN+FGLL+EGL+ A +GTK +VE Y V+ AL+FVCD V D I + +LAFFNETRH++GRTALLLSGGA LGFYHVG V+ L + ++PRV+ G+SAGSI+ +MIG RTDDE A G L FF+ Y R Sbjct: 1 MDEAIRVLMQQMPVLQKIANDLIDTILAPKVVAKQLVLVLALETGLLSIQQFTHLLSWLSSHVSTRKRLLRKLQQQQLTVTTQDEWMELAERMDQIQGNDVWRSDPNCQLYERERISARIDEFVHLMRRHDIFELMFVLRGSIGRNKFGLLHEGLFTKARAGTKVLVETYHNVICAALDFVCDAQVLHDQDPIPTEARLAFFNETRHSYGRTALLLSGGAALGFYHVGVVRTLMENRLMPRVIGGSSAGSIVCAMIGTRTDDECTNDLFQVKGTVAPGHSGKLELSFFRPYTNR 294
BLAST of EWM25284.1 vs. NCBI_GenBank
Match: gi|1210521341|dbj|GAX19798.1| (TAG lipase / steryl ester hydrolase / phospholipase A2 / LPA acyltransferase [Fistulifera solaris]) HSP 1 Score: 223.016 bits (567), Expect = 5.925e-62 Identity = 126/295 (42.71%), Postives = 181/295 (61.36%), Query Frame = 0 Query: 80 LVDRLLESLHHNLPEAERLLYSWADTIFAPKVVLRQYLMALGLEMTLFIYHLCYRLGARLVNRMTVKGRQISETRRRMAKAKNYYEWLKCAERMDELEGKNRWREVPESTLYNHRMLQEKINQFNNMMQNGDVFQLMFVLRGGISRNQFGLLNEGLYQHAYSGTKKIVERYLEVVVKALNFVCD--VNPSLDNISADVKLAFFNETRHAFGRTALLLSGGAGLGFYHVGFVKALFDQGILPRVLSGASAGSIISSMIGVRTDDEL----------YAMFTDGIARLDFFKLYKRR 362 L+D + L +P +++ DTI APKVVL+Q ++ L LE L L + L + ++ + R + + +++ EW++ AERMD+++G + WR P LY + +I++F ++M+ D+F+LMFVLRG I RN+FGLL+EGL+ A +GTK +VE Y V+ AL+FVCD V P D I + +LAFFNETRH++GRTALLLSGGA LGFYHVG V+ L + ++PRV+ G+SAGSI+ +MIG RTD+E A G L FF+ Y R Sbjct: 19 LMDEAIRVLMQQMPVLQQIANDLIDTILAPKVVLKQLVLVLALETGLVTIQQFTHLLSWLSSHVSTRKRLLRKLQQQQLTVVTQDEWMELAERMDQIQGNDVWRSDPHCQLYERERISARIDEFVHLMRRHDIFELMFVLRGSIGRNKFGLLHEGLFTKARAGTKVLVETYHNVICAALDFVCDAQVLPDQDPIPTEARLAFFNETRHSYGRTALLLSGGAALGFYHVGVVRTLMENRLMPRVIGGSSAGSIVCAMIGTRTDEECTNDLFQVKGTVAPGHSGNLELSFFRPYTNR 313
BLAST of EWM25284.1 vs. NCBI_GenBank
Match: gi|219128642|ref|XP_002184517.1| (predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1] >gi|217403967|gb|EEC43916.1| predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 208.379 bits (529), Expect = 4.465e-59 Identity = 97/192 (50.52%), Postives = 134/192 (69.79%), Query Frame = 0 Query: 152 ETRRRMAKAKNYYEWLKCAERMDELEGKNRWREVPESTLYNHRMLQEKINQFNNMMQNGDVFQLMFVLRGGISRNQFGLLNEGLYQHAYSGTKKIVERYLEVVVKALNFVCD--VNPSLDNISADVKLAFFNETRHAFGRTALLLSGGAGLGFYHVGFVKALFDQGILPRVLSGASAGSIISSMIGVRTDDE 341 E+ ++ A ++ EW+ AER+D ++G + WR P LY + +I++ ++M+ D+F+LMFVLR I RN+FGLL+EGL+ A +GTK +VE Y VV AL+F CD V+P D I D +LAFFNETRHA+GRTALLLSGGA LGFYH G VK L + ++PRV+ G+SAGS++ +MI RTD+E Sbjct: 3 ESEQQQASVQD--EWMDLAERIDSIQGNDVWRSDPSCPLYEQERISARIDELVHLMRRRDIFELMFVLRASIGRNKFGLLHEGLFSKALAGTKVLVETYHNVVCAALDFCCDAPVSPDEDPIPTDARLAFFNETRHAYGRTALLLSGGAALGFYHTGVVKTLMENRLMPRVIGGSSAGSLVCAMIATRTDEE 192
BLAST of EWM25284.1 vs. NCBI_GenBank
Match: gi|551666524|ref|XP_005836023.1| (hypothetical protein GUITHDRAFT_50638, partial [Guillardia theta CCMP2712] >gi|428180175|gb|EKX49043.1| hypothetical protein GUITHDRAFT_50638, partial [Guillardia theta CCMP2712]) HSP 1 Score: 199.519 bits (506), Expect = 4.250e-57 Identity = 96/208 (46.15%), Postives = 142/208 (68.27%), Query Frame = 0 Query: 155 RRMAKAKNYYEWLKCAERMDELEGKNRWREVPESTLYNHRMLQEKINQFNNMMQNGDVFQLMFVLRGGISRNQFGLLNEGLYQHAYSGTKKIVERYLEVVVKALNFVCDVNPSLDNISADVKLAFFNETRHAFGRTALLLSGGAGLGFYHVGFVKALFDQGILPRVLSGASAGSIISSMIGVRTDDELYAMFTDGIA------RLDFF 356 +R+ +AK+Y EWL A ++DEL+G W+ P S+LY+ R++QE++++ + D ++F LR G++RN G NEGLY Y GTK+++ER+ E +V+ + +C+ + +S KL FF E+RHA G+TALLLSGGA LG YH G V+ALF QG+LPRV+SG+SAG+I+ ++IGVRT +EL +F +G+ RLDFF Sbjct: 1 KRLEEAKSYEEWLAAATKLDELQGAEAWKRDPSSSLYDSRLIQERLSEMLRLEAKADYSSIVFWLRSGLTRNLGGTGNEGLYNQTYVGTKRLIERHNEELVRMMLGICECKE--EELSLQEKLDFFTESRHALGKTALLLSGGASLGMYHFGVVRALFMQGLLPRVMSGSSAGAIVLAIIGVRTSEELAELFGEGMELIRREIRLDFF 206
BLAST of EWM25284.1 vs. NCBI_GenBank
Match: gi|1072237782|gb|OEU22509.1| (patatin-domain-containing protein, partial [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 199.134 bits (505), Expect = 2.656e-55 Identity = 96/199 (48.24%), Postives = 139/199 (69.85%), Query Frame = 0 Query: 138 RLVNRMTVKGRQISETRRRMAKAKNYYEWLKCAERMDELEGKNRWREVPESTLYNHRMLQEKINQFNNMMQNGDVFQLMFVLRGGISRNQFGLLNEGLYQHAYSGTKKIVERYLEVVVKALNFVCD--VNPSLDNISADVKLAFFNETRHAFGRTALLLSGGAGLGFYHVGFVKALFDQGILPRVLSGASAGSIISSMI 334 RL+ + + R I+ +++ +A + EW+ AER+D ++G + WR +S LY + +I++F ++M+ D+F+LMFVLRGGI RN+FGLL+EGL+ A +GTK +VE Y VV +L+FVCD V I D +LAFFNETRH++GR+ALLLSGGA LGFYH+G VK L + ++PRVL G+SAGSI+ +M+ Sbjct: 13 RLLANFSSRSRLINNLQKQQNEALSQDEWMDLAERIDSIQGNDIWRSNNDSQLYERGRISARIDEFVHLMRRQDIFELMFVLRGGIGRNRFGLLHEGLFSKAMAGTKVLVETYHNVVCASLDFVCDAPVAEGEIPIPTDARLAFFNETRHSYGRSALLLSGGAALGFYHIGVVKTLMENRLMPRVLGGSSAGSIVCAMV 211
BLAST of EWM25284.1 vs. NCBI_GenBank
Match: gi|1214713131|gb|OWZ24037.1| (Patatin-like phosphoLipase [Phytophthora megakarya]) HSP 1 Score: 186.422 bits (472), Expect = 3.562e-49 Identity = 96/255 (37.65%), Postives = 148/255 (58.04%), Query Frame = 0 Query: 106 IFAPKVVLRQYLMALGLEMTLFIYHLCYRLGARLVNRMTVKGRQISETRRRMAKAKNYYEWLKCAERMDELEGKNRWREVPESTLYNHRMLQEKINQFNNMMQNGDVFQLMFVLRGGISRNQFGLLNEGLYQHAYSGTKKIVERYLEVVVKALNFVCDVN----PSLDNISADVKLAFFNETRHAFGRTALLLSGGAGLGFYHVGFVKALFDQGILPRVLSGASAGSIISSMIGVRTDDELYAMFTDGIARLDFF 356 + P V R L + + + ++ +R +++T KGR+ + R+++ K + E A +D+LEGK++WRE P S L+ + + K + + DV LMF LR G+ R +GL N LY + GTK+++E YL+ +V+++N V + D +S D KLAFF+ETRHAFGR+AL+LSGG GFYH G +KAL + +LP V++G+SAGSI++ IGVR DDE+ + L+F Sbjct: 86 LLVPDVFARYLCATFMLHIVYELQSVARKMLSRTCHQLTAKGRRTLKLRQQLDNVKTFQERQSIAGELDKLEGKDKWREDPASGLFLYERVMNKTQMYKRLKLENDVMGLMFALRAGLLRKHWGLGNPRLYSVSNVGTKRVIEEYLDTIVQSMNVVLRAKGTEEENNDELSIDNKLAFFSETRHAFGRSALMLSGGGAHGFYHAGVIKALVENNLLPNVIAGSSAGSILAGAIGVRHDDEVLDFLSGENVNLNFL 340 The following BLAST results are available for this feature:
BLAST of EWM25284.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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