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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_101215g2.9923.mrna |
| Orig protein id | gnl|cribi|Naga_101215g2.9923 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002465.1 | supercontig | CM002465.1:903354..904888 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna5396 ID=rna5396|Name=rna5396|organism=Nannochloropsis gaditana|type=mRNA|length=871bp
GAGGTTTGGATGTGCAGCATTCCTGTTTCCGTCCCTGCCCGTAGAGTTTT
TAAAAGGGCTTGGAGCTTTTGTCCTCGTCTGGCATAGTCACATCGCCGGC
TTCGATTAGCACCGAGCCGCCATGCGGAGAACACTTTGTCCATCCCTTTT
CACTCACGTGCGTCCTGCTCTTCACACGTGTGTAGAACGGACACGACAAC
GAAATCAAGCCCGCACCACCATGGGTGAATCTGCCACGCCAGTCAAAGCC
GTCCCTGAGGCTGCTTCGTCCTCCGCCTCCCCACCTCCCCCCACCTCAGC
ACAAATACCCCCCCGTCCGGCCTCTAAGCCCGTCGGCGAGCTCTACCGCA
TTCGACCCTGGCACACAGTGATCGTTCTCACGTTGGCCTTGCTCTTGGAC
CTGCCTTTTTTGATCGACCGGTTGGCCTTGTCCCCCTATACCTCCCATAC
CACTGGCGGGGTCCTGGTAACTGGGGCGTCCACGGGCATCGGCCGCGATG
CCGCCATCACCCTCGCAACCAAGGAGCCAGGACTGATCGTATACGCAGGC
GTGCGAAACTTGAGAGACGCCAAAGCCATTACCGCCCTCCATTTGCCGAA
CCTCCTGCCCGTTACCATGGACGTGACCAAAGACAACAGCGTGCAAGCCG
CCCGGCGTACCATCCTGAAAGACCTCGCCTCCCGCGGACCCGAACCCGAC
AACCCGCTGCCATTCGTCGGCCTGGTAAACAACGCAGGCGTGACGGGGAT
GGCTCCCTTGGAACACCACGCCCTTCCCGAGGTGGAAAAAATCTTCGCCG
TCAACGTCTTCGGCCTCCTAAGGGTCACGCAAGCCTTCCTCCCCGAGATT
AGGTTGGGAAGAAGGGAGGGA back to topprotein sequence of rna5396 >rna5396-protein ID=rna5396-protein|Name=rna5396|organism=Nannochloropsis gaditana|type=polypeptide|length=229bp
MRRSLVGMYTFTEESLLNKGGSGGQAKPPSSSVPPSPPPSVPPSATPSPT
RSGQRSAPAMKTGPAPPIGSRPGRPPSTEEEEPPPLPIMLKLASNSRLEM
PRSMLSSPPSSSRRGGSTGRPSLSSSTWRSLMVCSSFVIFPGSSSSNSLP
SASSCIADDSSTSVPPPPPSPPPPPPPPPPPPPPSPANGTSGGDGTVAPV
SAISSILSTSSMPRDVIFMVSPSTFCRLN back to topmRNA from alignment at CM002465.1:903354..904888- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna5396 ID=rna5396|Name=rna5396|organism=Nannochloropsis gaditana|type=mRNA|length=1535bp|location=Sequence derived from alignment at CM002465.1:903354..904888- (Nannochloropsis gaditana)
GCCACGGACAGAAGCCTGCAACAAGGTGCCCTCCCCGCCCAATGGCACGC
TTTCCCCCTGCGCGAGGGCGGGGGCTGTCGTCGGTGGGTACGGGGTATGG
TCCCCGGAGGAGGCGCCCAGTTGTAGAATGGCCTCGATGCAACGGTCGTC
CAGGGAGGTCGGACCACTGCCTAACCCCACGGAGGCCCCCGAGCCTTCCC
GCCCTCCCTCCAGCCCTCCTTCCCGCCCTCGCAGGCCCCGGAGCGAGGGT
CCCGAGGACGACACGACCGAGGAGGTACTGTTGAAATGATCCATGTTGAT
GAGCTCCTCCCCCGTGGCCGTGGTGGCCAGACTGGCCGGCCGCTCTTCCT
CGCCTTCCCTCCCTCCCTCTCTCCCTCCCTCCTTGCCGTCGTCCCCCCCC
ACCCGCTCCTGCTTCACCCGGTTCATCCCCTCGGCGTAAGTGCCTCCCAT
CGCAGTCGGGGACCCCATGCGCCGGAGCTTGGTCGGCATGTACACGTTCA
CGGAGGAATCGCTCTTGAACAAGGGAGGCAGCGGGGGGCAGGCCAAGCCG
CCCTCCTCCTCCGTCCCGCCTTCCCCCCCACCCTCTGTTCCGCCCTCCGC
CACGCCCTCCCCTACCAGGTCTGGACAGCGCTCCGCCCCTGCCATGAAGA
CGGGGCCTGCCCCTCCCATCGGGAGCCGCCCCGGTCGACCACCGTCCACG
GAGGAGGAAGAACCCCCGCCGCTTCCTATCATGCTCAAGCTTGCTTCGAA
TTCCAGGCTCGAGATGCCTCGCAGCATGCTGTCGTCCCCTCCCTCCTCCT
CGCGCCGGGGGGGGTCCACGGGCAGGCCCTCCCTTTCTTCCTCCACTTGG
AGGTCGCTCATGGTCTGCTCCAGTTTCGTGATCTTTCCGGGCTCATCTTC
GTCCAACTCCTTACCTTCGGCTTCGTCGTGCATCGCCGATGACTCCTCCA
CTTCTGTTCCACCTCCTCCTCCTTCTCCTCCTCCTCCTCCTCCTCCTCCT
CCTCCTCCTCCTCCTCCTTCGCCTGCAAACGGTACCTCTGGTGGTGACGG
AACAGTGGCACCCGTTTCCGCCATCTCAAGCATACTGTCAACTTCCTCTA
TGCCTAGAGATGTGATTTTTATGGTGGTGAGTAAAAACGCGTAGATAGGG
GCAAGTTAAGTGATGGGAGGGTAAAGAGAAAGGAGGTAGAAGGAGGGGCT
GGGTAGTCATGCACACTACGCGGGGGCTCAATGAGAAAAGCATACTTTCT
TCTCCCCTGCCCAACAGTCTCCATCTACATTTTGCCGTTTGAATTAAAAG
CAGGTAAACCGGATGTGTTGGGAGATATGAGAACGGAGGGCTCTACAAGA
AGGGTCGAAAGGTAAGGCAGTCTAAGAAGAGGTGGCCAACCTAGAGCCTG
TTACCCTACAAAATCTAACTTTGGTTACTTGACGGGTAATGTATAACCTG
GAGTGTTATACCCTTCTATTTGACTAAGTCCTGCCATTAAATAATTCCTC
AGAGAAAAAAAGAAACCTCCCTGGCATGTCAGCCG back to topCoding sequence (CDS) from alignment at CM002465.1:903354..904888- >rna5396 ID=rna5396|Name=rna5396|organism=Nannochloropsis gaditana|type=CDS|length=1380bp|location=Sequence derived from alignment at CM002465.1:903354..904888- (Nannochloropsis gaditana)
TCTCCATCTACATTTTGCCGTTTGAATTAAATGCGCCGGAGCTTGGTCGG
CATGTACACGTTCACGGAGGAATCGCTCTTGAACAAGGGAGGCAGCGGGG
GGCAGGCCAAGCCGCCCTCCTCCTCCGTCCCGCCTTCCCCCCCACCCTCT
GTTCCGCCCTCCGCCACGCCCTCCCCTACCAGGTCTGGACAGCGCTCCGC
CCCTGCCATGAAGACGGGGCCTGCCCCTCCCATCGGGAGCCGCCCCGGTC
GACCACCGTCCACGGAGGAGGAAGAACCCCCGCCGCTTCCTATCATGCTC
AAGCTTGCTTCGAATTCCAGGCTCGAGATGCCTCGCAGCATGCTGTCGTC
CCCTCCCTCCTCCTCGCGCCGGGGGGGGTCCACGGGCAGGCCCTCCCTTT
CTTCCTCCACTTGGAGGTCGCTCATGGTCTGCTCCAGTTTCGTGATCTTT
CCGGGCTCATCTTCGTCCAACTCCTTACCTTCGGCTTCGTCGTGCATCGC
CGATGACTCCTCCACTTCTGTTCCACCTCCTCCTCCTTCTCCTCCTCCTC
CTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTTCGCCTGCAAACGGTACC
TCTGGTGGTGACGGAACAGTGGCACCCGTTTCCGCCATCTCAAGCATACT
GTCAACTTCCTCTATGCCTAGAGATGTGATTTTTATGGTGTCTCCATCTA
CATTTTGCCGTTTGAATTAAATGCGCCGGAGCTTGGTCGGCATGTACACG
TTCACGGAGGAATCGCTCTTGAACAAGGGAGGCAGCGGGGGGCAGGCCAA
GCCGCCCTCCTCCTCCGTCCCGCCTTCCCCCCCACCCTCTGTTCCGCCCT
CCGCCACGCCCTCCCCTACCAGGTCTGGACAGCGCTCCGCCCCTGCCATG
AAGACGGGGCCTGCCCCTCCCATCGGGAGCCGCCCCGGTCGACCACCGTC
CACGGAGGAGGAAGAACCCCCGCCGCTTCCTATCATGCTCAAGCTTGCTT
CGAATTCCAGGCTCGAGATGCCTCGCAGCATGCTGTCGTCCCCTCCCTCC
TCCTCGCGCCGGGGGGGGTCCACGGGCAGGCCCTCCCTTTCTTCCTCCAC
TTGGAGGTCGCTCATGGTCTGCTCCAGTTTCGTGATCTTTCCGGGCTCAT
CTTCGTCCAACTCCTTACCTTCGGCTTCGTCGTGCATCGCCGATGACTCC
TCCACTTCTGTTCCACCTCCTCCTCCTTCTCCTCCTCCTCCTCCTCCTCC
TCCTCCTCCTCCTCCTCCTCCTTCGCCTGCAAACGGTACCTCTGGTGGTG
ACGGAACAGTGGCACCCGTTTCCGCCATCTCAAGCATACTGTCAACTTCC
TCTATGCCTAGAGATGTGATTTTTATGGTG back to top
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