EWM25291.1, cds5383 (CDS) Nannochloropsis gaditana

Overview
NameEWM25291.1
Unique Namecds5383
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002465.1:903763..904422 -
Alignment locationCM002465.1:903592..903621 -

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Properties
Property NameValue
Protein idEWM25291.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_101215g2.9923.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002465.1supercontigCM002465.1:903763..904422 -
CM002465.1supercontigCM002465.1:903592..903621 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
[Close]
BLAST of EWM25291.1 vs. NCBI_GenBank
Match: gi|585107039|gb|EWM25291.1| (hypothetical protein Naga_101215g2 [Nannochloropsis gaditana])

HSP 1 Score: 415.616 bits (1067), Expect = 4.143e-146
Identity = 229/229 (100.00%), Postives = 229/229 (100.00%), Query Frame = 0 
Query:    1 MRRSLVGMYTFTEESLLNKGGSGGQAKPPSSSVPPSPPPSVPPSATPSPTRSGQRSAPAMKTGPAPPIGSRPGRPPSTEEEEPPPLPIMLKLASNSRLEMPRSMLSSPPSSSRRGGSTGRPSLSSSTWRSLMVCSSFVIFPGSSSSNSLPSASSCIADDSSTSVPPPPPSPPPPPPPPPPPPPPSPANGTSGGDGTVAPVSAISSILSTSSMPRDVIFMVSPSTFCRLN 229
            MRRSLVGMYTFTEESLLNKGGSGGQAKPPSSSVPPSPPPSVPPSATPSPTRSGQRSAPAMKTGPAPPIGSRPGRPPSTEEEEPPPLPIMLKLASNSRLEMPRSMLSSPPSSSRRGGSTGRPSLSSSTWRSLMVCSSFVIFPGSSSSNSLPSASSCIADDSSTSVPPPPPSPPPPPPPPPPPPPPSPANGTSGGDGTVAPVSAISSILSTSSMPRDVIFMVSPSTFCRLN
Sbjct:    1 MRRSLVGMYTFTEESLLNKGGSGGQAKPPSSSVPPSPPPSVPPSATPSPTRSGQRSAPAMKTGPAPPIGSRPGRPPSTEEEEPPPLPIMLKLASNSRLEMPRSMLSSPPSSSRRGGSTGRPSLSSSTWRSLMVCSSFVIFPGSSSSNSLPSASSCIADDSSTSVPPPPPSPPPPPPPPPPPPPPSPANGTSGGDGTVAPVSAISSILSTSSMPRDVIFMVSPSTFCRLN 229
[Close]
BLAST of EWM25291.1 vs. NCBI_GenBank
Match: gi|553183390|ref|XP_005853890.1| (hypothetical protein NGA_0428200, partial [Nannochloropsis gaditana CCMP526] >gi|422295171|gb|EKU22470.1| hypothetical protein NGA_0428200, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 97.0561 bits (240), Expect = 5.561e-23
Identity = 50/50 (100.00%), Postives = 50/50 (100.00%), Query Frame = 0 
Query:  180 PPPPPSPANGTSGGDGTVAPVSAISSILSTSSMPRDVIFMVSPSTFCRLN 229
            PPPPPSPANGTSGGDGTVAPVSAISSILSTSSMPRDVIFMVSPSTFCRLN
Sbjct:    1 PPPPPSPANGTSGGDGTVAPVSAISSILSTSSMPRDVIFMVSPSTFCRLN 50
The following BLAST results are available for this feature:
BLAST of EWM25291.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 2
Match NameE-valueIdentityDescription
gi|585107039|gb|EWM25291.1|4.143e-146100.00hypothetical protein Naga_101215g2 [Nannochloropsi... [more]
gi|553183390|ref|XP_005853890.1|5.561e-23100.00hypothetical protein NGA_0428200, partial [Nannoch... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna5396rna5396Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications