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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100240g4.2376.mrna |
| Orig protein id | gnl|cribi|Naga_100240g4.2376 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002465.1 | supercontig | CM002465.1:892657..894180 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna5391 ID=rna5391|Name=rna5391|organism=Nannochloropsis gaditana|type=mRNA|length=1230bp
ATGGGCCTGGGGAAGACCGTGCAGACGGTCGCCTTTGTCCACTCCCTCTG
GAGCAAGGAAAAGCTACCCGGACCTTTCCTGGTGATCGCGCCGCTCTCCA
CCCTGCAGCATTGGTACCGGGAGTTCACGGCCTGGACGGACCTGACCACG
ATCGTCTACCACGGGTCGGCGGAGGACCGGGCGGTCTGCCGCGACTACGA
ATGGCGCTTCCCCCAGAAGTTCCAAGTGCTGATCACCACTCCGGAGATGT
GCCTGGCTGCGGACGCGTCCTTCCTGATGGATCTGGAGTGGACATTGCTG
GTGGTGGATGAAGCCCACCGACTCAAAAACACGCACTCTCGCCTCTCCCT
CACCCTCCGGGAGCGGTTTCACTACCCTTCCGCCCTCCTCCTCACGGGAA
CGCCCCTCCAGAACGACCTCCCGGAGCTTTTCTGCCTTCTCTCCTTCGTC
GATCCGCGGGCCTTCTCGGACTTGGAGCGCTTCGAAGCCGCCTACGGGAA
TCTCCAGGACGAATCTTCTTTAACTTCCCTCCAAGAAGCCATCCGCCCGT
ACCTGCTCCGGCGCATGAAGGAAGACGTGGAGAAGGGTCTTCCCCCCAAG
GAGGAGACCATCATCGACGTGGAGCTCACGGGCGTGCAAAAACAATATTA
CAGGGCAATCTACGAGAAGAACGTGGAATTCCTCCTGGGGGGCCGGAAGG
CCGTCGACGGGCCCAGCCTGATGAACCTGTGCATGGAGCTCCGAAAGTGC
TGCAACCACCCTTTCTTGAACAAGGGAGTGGAGCTGGACATCCGGAGCCA
CGCAGAGGCCACGGGCAAAGTCTACACCTCTGACGCGGACCTGCTGGTGC
AATACAGCGGGAAGCTCGTGCTCTTGGACAAACTGCTGCCCCGCCTCCAA
GCAAACGGACATCGGGTCTTGCTCTTCAGCCAGTTCAAAATCATGTTGGA
TATCCTCGAAGATTATTTGGAAGGGAGAAAATTTTCCTTTGGACGGATCG
ATGGAACGGTCACGGGAGAGAAACGACAGCAGCAACTTGACGAGTTTCAA
AAGCCGGCGTCCCCCCTCTTCGTCATGCTCCTGTCCACGCGGGCGGGGGG
TGTAGGGATCAATTTGACCTCCGCCGACACGGTCATCATCTTCGACAGCG
ACTGGAACCCCCAAAACGACATTCAGGCCCAAGCACGCTGCCATCGAATC
GGGCAGAACAAAAACGTGCAGTACGAGTGA back to topprotein sequence of rna5391 >rna5391-protein ID=rna5391-protein|Name=rna5391|organism=Nannochloropsis gaditana|type=polypeptide|length=468bp
MTSHTKDLGPGCALPGPRLGLLHPPARGSLSLPNSTDASQGHCHDPSKSH
DSTSSNRLGVTSVRSFANGRALGGPAGLSAATAAFFYPKQKAAASDTGGN
GGNKGDNRGDVDEEVVIIPSIQTGRPEAEGDSGTGKEPRLLDTRSAAPGT
TDAPGTSVGSPEPIAAQTRAGCASIPSEPGAVAGQASVLSPPSSASLRPP
PPAEVGTEGSGPEREGGREGGREEGGAPAVKRDVNEVVEGRASSQVGNTA
DAGAAIQPADRTEEECVLVSDGFNPEKERPTEDEKGEGEEEDEAREAQGG
EAGGRTSLSSPPLGKMLVEILSPQVAHPTDIKAADPPTSLAKHVPPAESL
PPSTSYGPAVVSAGAKKKQQSSLMHYWGRKGRNTAPPAGREELGFRSGIV
WLMLLARSSSTQVYAFINHFVTVCSHKVQETSKVAFKKALGKLSWKESEI
LTYMCKRGGNAKEGRGGQ back to topmRNA from alignment at CM002465.1:892657..894180+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna5391 ID=rna5391|Name=rna5391|organism=Nannochloropsis gaditana|type=mRNA|length=1524bp|location=Sequence derived from alignment at CM002465.1:892657..894180+ (Nannochloropsis gaditana)
ATGACCTCGCATACGAAAGATCTTGGCCCTGGCTGTGCTCTACCCGGGCC
GCGACTCgggctcctccatcccccagCAAGGGGcagtctctccctcccga
acAGCACCGACGCCAGCCAAGGCCATTGCCACGACCCCAGCAAGAGCCAC
GACTCCACGAGCAGCAACCGACTCGGAGTCACGTCGGTGCGGTCGTTTGC
GAACGGTAGGGCTCTGGGAGGCCCCGCCGGTTTGTCCGCGGCAACGGCCG
CTTTTTTCTACCCAAAACAGAAAGCAGCAGCGTCGGATACGggcgggaac
ggagggaaCAAGGGCGATAATCGTGgtgacgtggacgaggaggtggtcaT
CATTCCTTCCATTCAGACTGGGCGACCCGAAGCGGAGGGCGATTCGGGGA
CTGGGAAGGAACCGAGACTACTGGACACAAGAAGCGCAGCACCCGGGACG
ACAGACGCTCCAGGCACATCTGTGGGGAGCCCTGAGCCTATCGCTGCACA
GACAAGGGCGGGTTGTGCTTCCATTCCGTCAGAGCCCGGAGCAGTCGCAG
GCCAAGCGTCGGTcttgtccccgccctcctctgcctcgttgcgccctccc
cctcccgcagaggttgggacggaggggagtggaccagaaagggagggagg
aagggagggagggcgggaggaagggggggcaccgGCCGTGAAGAGGGACG
TGAATGAGGTGGTTGAGGGGCGTGCGAGCAGTCAGGTGGGTAATACAGCC
GACGCCGGGGCAGCAATACAACCGGCGGATAggaccgaggaggagtgTGT
CTTGGTATCGGACGGATTCAATCCTGAGAAGGAGAGACCCACAGAAgacg
agaaaggggaaggggaggaggaggacgaagcccGGGAGGCCCAAGGGGGT
GAGGCTGGCGGGCGgacgtccctctcctcgcctccacTGGGGAAAATGCT
CGTTGAAATCCTCAGCCCGCAGGTTGCTCATCCCACGGACATCAAGGCGG
CTGATCCTCCCACTTCCTTGGCAAAACATGTGCCGCCTGCAGAAAGcttg
cctccctcgacctcctaTGGTCCCGCAGTGGTCTCGGCAGGGGCCAAAAA
GAAGCAGCAATCCTCGCTCATGCACTATTGGGgtagaaaagggaggaaca
CCGCTCCGCCTGCGGTGCCATAAACGATGGGAAGATAGGGAATAGACCTT
CCGGGAAGCCCATCACAAGGGCGTGTCGAGTAAAGTGAGGCTAGGGCGCG
CGCGGTGGAAGAGCACTGACTTGTTTTACAGGGTCGCGAGGAGCTAGGGT
TCAGGTCTGGGATCGTCTGGCTTATGCTTCTCGCTCGGTCATCTAGCACC
CAGGTCTACGCGTTCATTAATCATTTCGTCACTGTCTGTTCGCATAAAGT
GCAAGAAACATCAAAGGTGGCTTTCAAAAAAGCCTTAGGAAAACTGTcgt
ggaaagaaagcgagATTCTTACATATATGTGTAAGCGTGGAGGaaacgcg
aaggagggaagaggcggacAATAG back to topCoding sequence (CDS) from alignment at CM002465.1:892657..894180+ >rna5391 ID=rna5391|Name=rna5391|organism=Nannochloropsis gaditana|type=CDS|length=2814bp|location=Sequence derived from alignment at CM002465.1:892657..894180+ (Nannochloropsis gaditana)
ATGACCTCGCATACGAAAGATCTTGGCCCTGGCTGTGCTCTACCCGGGCC
GCGACTCgggctcctccatcccccagCAAGGGGcagtctctccctcccga
acAGCACCGACGCCAGCCAAGGCCATTGCCACGACCCCAGCAAGAGCCAC
GACTCCACGAGCAGCAACCGACTCGGAGTCACGTCGGTGCGGTCGTTTGC
GAACGGTAGGGCTCTGGGAGGCCCCGCCGGTTTGTCCGCGGCAACGGCCG
CTTTTTTCTACCCAAAACAGAAAGCAGCAGCGTCGGATACGggcgggaac
ggagggaaCAAGGGCGATAATCGTGgtgacgtggacgaggaggtggtcaT
CATTCCTTCCATTCAGACTGGGCGACCCGAAGCGGAGGGCGATTCGGGGA
CTGGGAAGGAACCGAGACTACTGGACACAAGAAGCGCAGCACCCGGGACG
ACAGACGCTCCAGGCACATCTGTGGGGAGCCCTGAGCCTATCGCTGCACA
GACAAGGGCGGGTTGTGCTTCCATTCCGTCAGAGCCCGGAGCAGTCGCAG
GCCAAGCGTCGGTcttgtccccgccctcctctgcctcgttgcgccctccc
cctcccgcagaggttgggacggaggggagtggaccagaaagggagggagg
aagggagggagggcgggaggaagggggggcaccgGCCGTGAAGAGGGACG
TGAATGAGGTGGTTGAGGGGCGTGCGAGCAGTCAGGTGGGTAATACAGCC
GACGCCGGGGCAGCAATACAACCGGCGGATAggaccgaggaggagtgTGT
CTTGGTATCGGACGGATTCAATCCTGAGAAGGAGAGACCCACAGAAgacg
agaaaggggaaggggaggaggaggacgaagcccGGGAGGCCCAAGGGGGT
GAGGCTGGCGGGCGgacgtccctctcctcgcctccacTGGGGAAAATGCT
CGTTGAAATCCTCAGCCCGCAGGTTGCTCATCCCACGGACATCAAGGCGG
CTGATCCTCCCACTTCCTTGGCAAAACATGTGCCGCCTGCAGAAAGcttg
cctccctcgacctcctaTGGTCCCGCAGTGGTCTCGGCAGGGGCCAAAAA
GAAGCAGCAATCCTCGCTCATGCACTATTGGGgtagaaaagggaggaaca
CCGCTCCGCCTGCGGGTCGCGAGGAGCTAGGGTTCAGGTCTGGGATCGTC
TGGCTTATGCTTCTCGCTCGGTCATCTAGCACCCAGGTCTACGCGTTCAT
TAATCATTTCGTCACTGTCTGTTCGCATAAAGTGCAAGAAACATCAAAGG
TGGCTTTCAAAAAAGCCTTAGGAAAACTGTcgtggaaagaaagcgagATT
CTTACATATATGTGTAAGCGTGGAGGaaacgcgaaggagggaagaggcgg
acAATAGATGACCTCGCATACGAAAGATCTTGGCCCTGGCTGTGCTCTAC
CCGGGCCGCGACTCgggctcctccatcccccagCAAGGGGcagtctctcc
ctcccgaacAGCACCGACGCCAGCCAAGGCCATTGCCACGACCCCAGCAA
GAGCCACGACTCCACGAGCAGCAACCGACTCGGAGTCACGTCGGTGCGGT
CGTTTGCGAACGGTAGGGCTCTGGGAGGCCCCGCCGGTTTGTCCGCGGCA
ACGGCCGCTTTTTTCTACCCAAAACAGAAAGCAGCAGCGTCGGATACGgg
cgggaacggagggaaCAAGGGCGATAATCGTGgtgacgtggacgaggagg
tggtcaTCATTCCTTCCATTCAGACTGGGCGACCCGAAGCGGAGGGCGAT
TCGGGGACTGGGAAGGAACCGAGACTACTGGACACAAGAAGCGCAGCACC
CGGGACGACAGACGCTCCAGGCACATCTGTGGGGAGCCCTGAGCCTATCG
CTGCACAGACAAGGGCGGGTTGTGCTTCCATTCCGTCAGAGCCCGGAGCA
GTCGCAGGCCAAGCGTCGGTcttgtccccgccctcctctgcctcgttgcg
ccctccccctcccgcagaggttgggacggaggggagtggaccagaaaggg
agggaggaagggagggagggcgggaggaagggggggcaccgGCCGTGAAG
AGGGACGTGAATGAGGTGGTTGAGGGGCGTGCGAGCAGTCAGGTGGGTAA
TACAGCCGACGCCGGGGCAGCAATACAACCGGCGGATAggaccgaggagg
agtgTGTCTTGGTATCGGACGGATTCAATCCTGAGAAGGAGAGACCCACA
GAAgacgagaaaggggaaggggaggaggaggacgaagcccGGGAGGCCCA
AGGGGGTGAGGCTGGCGGGCGgacgtccctctcctcgcctccacTGGGGA
AAATGCTCGTTGAAATCCTCAGCCCGCAGGTTGCTCATCCCACGGACATC
AAGGCGGCTGATCCTCCCACTTCCTTGGCAAAACATGTGCCGCCTGCAGA
AAGcttgcctccctcgacctcctaTGGTCCCGCAGTGGTCTCGGCAGGGG
CCAAAAAGAAGCAGCAATCCTCGCTCATGCACTATTGGGgtagaaaaggg
aggaacaCCGCTCCGCCTGCGGGTCGCGAGGAGCTAGGGTTCAGGTCTGG
GATCGTCTGGCTTATGCTTCTCGCTCGGTCATCTAGCACCCAGGTCTACG
CGTTCATTAATCATTTCGTCACTGTCTGTTCGCATAAAGTGCAAGAAACA
TCAAAGGTGGCTTTCAAAAAAGCCTTAGGAAAACTGTcgtggaaagaaag
cgagATTCTTACATATATGTGTAAGCGTGGAGGaaacgcgaaggagggaa
gaggcggacAATAG back to top
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