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Properties
| Property Name | Value |
|---|
| Product | uncharacterized protein |
| Orig transcript id | gnl|cribi|Naga_100135g15.5864.mrna |
| Orig protein id | gnl|cribi|Naga_100135g15.5864 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002465.1 | supercontig | CM002465.1:827273..828731 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna5371 ID=rna5371|Name=rna5371|organism=Nannochloropsis gaditana|type=mRNA|length=711bp
ATGCGGGAGAAGGAGCTCCGACAGGTGGTGCTGAGCAAGGAGGAGGAGAG
TCTGGTCCTCTGCCAGCTGCACAGCGTCCTCCGCCCCTTCCTTCTCCGGC
GCACCAAGTCTCAAGTCCTGTCTCACCTTCCCCGGAAACAAGAGCGGCTT
CTCGCTTGCCCCCTCTCCGCCTGGCAACGTCGGCTCTACCGCCTATTGGA
AGATCTGTCCCGTGCCCATTCCCCCGCCCCCACCTACCTCCTTCCCCCGT
CCTCCGCCCCTCGTCTCACCACCTCCAACCTCCTCAACCAGCTCCGCAAG
GTCCTGGGTCGTCGACCCCTGATATTCTCCCAGTTCACAACATCCCTCGA
CCTGATCGAGGACTTCTTTATCCATCGGGGGATGCCCTATTGCCGTCTCG
ACGGTCGGACGCCAGCTGACGCCCGCGCGGAGATAATCGCCGAATTCAAC
TGCGGAAGACGGGCCTCGTTCATGGCCTTTTTGATTACCACCCGGGCGGG
TGGGGTCGGTCTCAACCTCCAGGCAGGCGCCGACACGGTGATTCTCTTCG
ACAGCGATTGGAACCCACAGAGCGACGCGCAAGCCATGGCGCGTTGCCAC
CGGATCGGCCAGACCGAGGAGGTGCTTGTGCTCAGGCTCGTATCGGGAGA
CAACAAATGTGGGAGGCAGCTGCAAGACGTGCGGCCCTTGATGAGAATAA
AAGCCGATTGA back to topprotein sequence of rna5371 >rna5371-protein ID=rna5371-protein|Name=rna5371|organism=Nannochloropsis gaditana|type=polypeptide|length=366bp
MRGTYAMAAVTVVTTACFSLQRVDAFIGAGVKARLPSLSRVHAQKPYHVF
DTKESFAPTIPGLPVSPEALDLKTIAQGVTFVAPLVLGASDAMAKGGEYG
ILEGRSFAFVHPIVMGALFLTTAYTGYLGWQFRTIRTLAGEMSALKDSLP
KLSDGSKVTLPVSKQIASVESALKNMGEGDEEAKQLKADLNLLRSPGVAV
LDTQMAALSEKRKTLLAGDFRDRHYNTASTLLGLGVFTSILGGFNTFFRS
GKLFPGPHLYAGAGITVLWAVAASMVPAMQKGNETARSLHIGLNALNLAL
FAWQVGTGLEIAIKGICVVEGGALCRHTMIGLKDNLRMPPSDSKLKHCFF
RRGSEEKYIYIERQET back to topmRNA from alignment at CM002465.1:827273..828731+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna5371 ID=rna5371|Name=rna5371|organism=Nannochloropsis gaditana|type=mRNA|length=1459bp|location=Sequence derived from alignment at CM002465.1:827273..828731+ (Nannochloropsis gaditana)
ATGCGAGGAACCTATGCGATGGCGGCGGTGACCGTGGTCACTACCGCATG
CTTCTCTCTTCAACGTGTTGATGCCTTCATCGGAGCTGGCGTGAAAGGTG
GGTACCTCTCGGTGCAGGCTTGTATGCCTCATTGTGCAAGTCTCTCTTGA
GGACTCTCCTCTTATCTTATCATCGGGGCCTTTCCCTCATGATAACTGTC
CGTATGCGTGACATGGCACAAAGCACTTGTCGTGCAGCGTGATTGAGTAC
CTGCCGGTCTCACCTGTGTTcactcctcctttttttatATCATTTCTCCA
GCCCgactcccttccttgtcgcgCGTGCACGCACAAAAGCCTTACCACGT
GTTTGACACCAAAGAATCTTTTGCGCCGACTATTCCTGGTTTGCCTGTAA
GTCCGGAAGCACTGGATCTGAAAACCATTGCGCAGGGGGTGACATTTGTA
GCCCCACTAGTCCTGGGAGCTTCGGACGCTAtggccaaggggggggagta
cGGTATCCTGGAAGGACGGAGCTTCGCCTTCGTGCACCCGATTGTCATGG
GGGCTTTGTTTTTGACCACCGCCTACACGGGGTACTTGGGCTGGCAGTTC
CGAACCATCCGTACGTTGGCGGGGGAGATGAGCGCGTTAAAAGACTCGCT
GCCCAAACTTTCGGACGGGAGCAAGGTGACCTTGCCGGTCTCGAAACAGA
TCGCCTCGGTGGAGAGTGCCTTGAAGAAcatgggagaaggcgatgaggAA
GCGAAGCAATTGAAAGCAGACCTGAACCTGCTGCGTTCGCCCGGCGTGGC
CGTTCTGGACACGCAGATGGCCGCATTGAGCGAGAAGCGCAAGACTTTGC
TTGCAGGCGATTTCCGAGACCGGCACTACAAcacggcctccacgctccTA
GGGCTGGGAGTCTTCACCTCCATTCTGGGCGGCTTCAATACCTTTTTCCG
CTCCGGGAAGCTGTTTCCCGGACCCCACCTGTACGCAGGAGCAGGAATAA
CAGTCTTgtgggcggtggcggcctccatgGTGCCGGCGATGCAGAAAGGC
AACGAGACTGCCCGCTCGCTGCACATCGGCTTGAACGCATTGAACCTGGC
TTTGTTCGCGTGGCAGGTGGGAACGGGGCTGGAGATTGCCATCAAGGTGT
GGGGGTTCACAAAATGGCCCTGAGggagagacaaggagggaagcagagga
cAAGCGTGGGAGGGCTGACTATTCGAGAGGACAGGCAGGCCTGGTTTAGG
TCCACAGGAGCGCCCGCCTTGTGGGTAAGTGAGTAGAGTGAATATTTTAG
GGTATTTGTGTGGTTGAGGGTGGAGCCCTGTGTCGCCACACGATGATCGG
ATTGAAGGACAACCTGAGAATGCCCCCGTCCGATTCAAAACTGAAACATT
GTTTTTTTCGGCGAGGATCTGAAGaaaaatatatatatattgaGAGACAA
GAGACTTGA back to topCoding sequence (CDS) from alignment at CM002465.1:827273..828731+ >rna5371 ID=rna5371|Name=rna5371|organism=Nannochloropsis gaditana|type=CDS|length=3303bp|location=Sequence derived from alignment at CM002465.1:827273..828731+ (Nannochloropsis gaditana)
ATGCGAGGAACCTATGCGATGGCGGCGGTGACCGTGGTCACTACCGCATG
CTTCTCTCTTCAACGTGTTGATGCCTTCATCGGAGCTGGCGTGAAAGCCC
gactcccttccttgtcgcgCGTGCACGCACAAAAGCCTTACCACGTGTTT
GACACCAAAGAATCTTTTGCGCCGACTATTCCTGGTTTGCCTGTAAGTCC
GGAAGCACTGGATCTGAAAACCATTGCGCAGGGGGTGACATTTGTAGCCC
CACTAGTCCTGGGAGCTTCGGACGCTAtggccaaggggggggagtacGGT
ATCCTGGAAGGACGGAGCTTCGCCTTCGTGCACCCGATTGTCATGGGGGC
TTTGTTTTTGACCACCGCCTACACGGGGTACTTGGGCTGGCAGTTCCGAA
CCATCCGTACGTTGGCGGGGGAGATGAGCGCGTTAAAAGACTCGCTGCCC
AAACTTTCGGACGGGAGCAAGGTGACCTTGCCGGTCTCGAAACAGATCGC
CTCGGTGGAGAGTGCCTTGAAGAAcatgggagaaggcgatgaggAAGCGA
AGCAATTGAAAGCAGACCTGAACCTGCTGCGTTCGCCCGGCGTGGCCGTT
CTGGACACGCAGATGGCCGCATTGAGCGAGAAGCGCAAGACTTTGCTTGC
AGGCGATTTCCGAGACCGGCACTACAAcacggcctccacgctccTAGGGC
TGGGAGTCTTCACCTCCATTCTGGGCGGCTTCAATACCTTTTTCCGCTCC
GGGAAGCTGTTTCCCGGACCCCACCTGTACGCAGGAGCAGGAATAACAGT
CTTgtgggcggtggcggcctccatgGTGCCGGCGATGCAGAAAGGCAACG
AGACTGCCCGCTCGCTGCACATCGGCTTGAACGCATTGAACCTGGCTTTG
TTCGCGTGGCAGGTGGGAACGGGGCTGGAGATTGCCATCAAGGGTATTTG
TGTGGTTGAGGGTGGAGCCCTGTGTCGCCACACGATGATCGGATTGAAGG
ACAACCTGAGAATGCCCCCGTCCGATTCAAAACTGAAACATTGTTTTTTT
CGGCGAGGATCTGAAGaaaaatatatatatattgaGAGACAAGAGACTTG
AATGCGAGGAACCTATGCGATGGCGGCGGTGACCGTGGTCACTACCGCAT
GCTTCTCTCTTCAACGTGTTGATGCCTTCATCGGAGCTGGCGTGAAAGCC
CgactcccttccttgtcgcgCGTGCACGCACAAAAGCCTTACCACGTGTT
TGACACCAAAGAATCTTTTGCGCCGACTATTCCTGGTTTGCCTGTAAGTC
CGGAAGCACTGGATCTGAAAACCATTGCGCAGGGGGTGACATTTGTAGCC
CCACTAGTCCTGGGAGCTTCGGACGCTAtggccaaggggggggagtacGG
TATCCTGGAAGGACGGAGCTTCGCCTTCGTGCACCCGATTGTCATGGGGG
CTTTGTTTTTGACCACCGCCTACACGGGGTACTTGGGCTGGCAGTTCCGA
ACCATCCGTACGTTGGCGGGGGAGATGAGCGCGTTAAAAGACTCGCTGCC
CAAACTTTCGGACGGGAGCAAGGTGACCTTGCCGGTCTCGAAACAGATCG
CCTCGGTGGAGAGTGCCTTGAAGAAcatgggagaaggcgatgaggAAGCG
AAGCAATTGAAAGCAGACCTGAACCTGCTGCGTTCGCCCGGCGTGGCCGT
TCTGGACACGCAGATGGCCGCATTGAGCGAGAAGCGCAAGACTTTGCTTG
CAGGCGATTTCCGAGACCGGCACTACAAcacggcctccacgctccTAGGG
CTGGGAGTCTTCACCTCCATTCTGGGCGGCTTCAATACCTTTTTCCGCTC
CGGGAAGCTGTTTCCCGGACCCCACCTGTACGCAGGAGCAGGAATAACAG
TCTTgtgggcggtggcggcctccatgGTGCCGGCGATGCAGAAAGGCAAC
GAGACTGCCCGCTCGCTGCACATCGGCTTGAACGCATTGAACCTGGCTTT
GTTCGCGTGGCAGGTGGGAACGGGGCTGGAGATTGCCATCAAGGGTATTT
GTGTGGTTGAGGGTGGAGCCCTGTGTCGCCACACGATGATCGGATTGAAG
GACAACCTGAGAATGCCCCCGTCCGATTCAAAACTGAAACATTGTTTTTT
TCGGCGAGGATCTGAAGaaaaatatatatatattgaGAGACAAGAGACTT
GAATGCGAGGAACCTATGCGATGGCGGCGGTGACCGTGGTCACTACCGCA
TGCTTCTCTCTTCAACGTGTTGATGCCTTCATCGGAGCTGGCGTGAAAGC
CCgactcccttccttgtcgcgCGTGCACGCACAAAAGCCTTACCACGTGT
TTGACACCAAAGAATCTTTTGCGCCGACTATTCCTGGTTTGCCTGTAAGT
CCGGAAGCACTGGATCTGAAAACCATTGCGCAGGGGGTGACATTTGTAGC
CCCACTAGTCCTGGGAGCTTCGGACGCTAtggccaaggggggggagtacG
GTATCCTGGAAGGACGGAGCTTCGCCTTCGTGCACCCGATTGTCATGGGG
GCTTTGTTTTTGACCACCGCCTACACGGGGTACTTGGGCTGGCAGTTCCG
AACCATCCGTACGTTGGCGGGGGAGATGAGCGCGTTAAAAGACTCGCTGC
CCAAACTTTCGGACGGGAGCAAGGTGACCTTGCCGGTCTCGAAACAGATC
GCCTCGGTGGAGAGTGCCTTGAAGAAcatgggagaaggcgatgaggAAGC
GAAGCAATTGAAAGCAGACCTGAACCTGCTGCGTTCGCCCGGCGTGGCCG
TTCTGGACACGCAGATGGCCGCATTGAGCGAGAAGCGCAAGACTTTGCTT
GCAGGCGATTTCCGAGACCGGCACTACAAcacggcctccacgctccTAGG
GCTGGGAGTCTTCACCTCCATTCTGGGCGGCTTCAATACCTTTTTCCGCT
CCGGGAAGCTGTTTCCCGGACCCCACCTGTACGCAGGAGCAGGAATAACA
GTCTTgtgggcggtggcggcctccatgGTGCCGGCGATGCAGAAAGGCAA
CGAGACTGCCCGCTCGCTGCACATCGGCTTGAACGCATTGAACCTGGCTT
TGTTCGCGTGGCAGGTGGGAACGGGGCTGGAGATTGCCATCAAGGGTATT
TGTGTGGTTGAGGGTGGAGCCCTGTGTCGCCACACGATGATCGGATTGAA
GGACAACCTGAGAATGCCCCCGTCCGATTCAAAACTGAAACATTGTTTTT
TTCGGCGAGGATCTGAAGaaaaatatatatatattgaGAGACAAGAGACT
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