EWM25307.1, cds5358 (CDS) Nannochloropsis gaditana

Overview
NameEWM25307.1
Unique Namecds5358
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002465.1:827273..827369 +
Alignment locationCM002465.1:827574..828418 +
Alignment locationCM002465.1:828573..828731 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM25307.1
Productuncharacterized protein
Orig transcript idgnl|cribi|Naga_100135g15.5864.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002465.1supercontigCM002465.1:827273..827369 +
CM002465.1supercontigCM002465.1:827574..828418 +
CM002465.1supercontigCM002465.1:828573..828731 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: INTERPRO
TermDefinition
IPR025067DUF4079
Homology
BLAST of EWM25307.1 vs. NCBI_GenBank
Match: gi|585107062|gb|EWM25307.1| (uncharacterized protein Naga_100135g15 [Nannochloropsis gaditana])

HSP 1 Score: 750.74 bits (1937), Expect = 0.000e+0
Identity = 366/366 (100.00%), Postives = 366/366 (100.00%), Query Frame = 0
Query:    1 MRGTYAMAAVTVVTTACFSLQRVDAFIGAGVKARLPSLSRVHAQKPYHVFDTKESFAPTIPGLPVSPEALDLKTIAQGVTFVAPLVLGASDAMAKGGEYGILEGRSFAFVHPIVMGALFLTTAYTGYLGWQFRTIRTLAGEMSALKDSLPKLSDGSKVTLPVSKQIASVESALKNMGEGDEEAKQLKADLNLLRSPGVAVLDTQMAALSEKRKTLLAGDFRDRHYNTASTLLGLGVFTSILGGFNTFFRSGKLFPGPHLYAGAGITVLWAVAASMVPAMQKGNETARSLHIGLNALNLALFAWQVGTGLEIAIKGICVVEGGALCRHTMIGLKDNLRMPPSDSKLKHCFFRRGSEEKYIYIERQET 366
            MRGTYAMAAVTVVTTACFSLQRVDAFIGAGVKARLPSLSRVHAQKPYHVFDTKESFAPTIPGLPVSPEALDLKTIAQGVTFVAPLVLGASDAMAKGGEYGILEGRSFAFVHPIVMGALFLTTAYTGYLGWQFRTIRTLAGEMSALKDSLPKLSDGSKVTLPVSKQIASVESALKNMGEGDEEAKQLKADLNLLRSPGVAVLDTQMAALSEKRKTLLAGDFRDRHYNTASTLLGLGVFTSILGGFNTFFRSGKLFPGPHLYAGAGITVLWAVAASMVPAMQKGNETARSLHIGLNALNLALFAWQVGTGLEIAIKGICVVEGGALCRHTMIGLKDNLRMPPSDSKLKHCFFRRGSEEKYIYIERQET
Sbjct:    1 MRGTYAMAAVTVVTTACFSLQRVDAFIGAGVKARLPSLSRVHAQKPYHVFDTKESFAPTIPGLPVSPEALDLKTIAQGVTFVAPLVLGASDAMAKGGEYGILEGRSFAFVHPIVMGALFLTTAYTGYLGWQFRTIRTLAGEMSALKDSLPKLSDGSKVTLPVSKQIASVESALKNMGEGDEEAKQLKADLNLLRSPGVAVLDTQMAALSEKRKTLLAGDFRDRHYNTASTLLGLGVFTSILGGFNTFFRSGKLFPGPHLYAGAGITVLWAVAASMVPAMQKGNETARSLHIGLNALNLALFAWQVGTGLEIAIKGICVVEGGALCRHTMIGLKDNLRMPPSDSKLKHCFFRRGSEEKYIYIERQET 366          
BLAST of EWM25307.1 vs. NCBI_GenBank
Match: gi|720036761|ref|XP_010267460.1| (PREDICTED: uncharacterized protein LOC104604693 [Nelumbo nucifera])

HSP 1 Score: 238.81 bits (608), Expect = 1.349e-73
Identity = 129/273 (47.25%), Postives = 172/273 (63.00%), Query Frame = 0
Query:   45 KPYHVFDTKESFAPTIPGL--PVSPEALDLKTIAQGVTFVA-PLVLGASDAMAKGGEYGILEGRSFAFVHPIVMGALFLTTAYTGYLGWQFRTIRTLAGEMSALKDSLPKLSDGSKVTLPVSKQIASVESALKNMGEGDEEAKQLKADLNLLRSPGVAVLDTQMAALSEKRKTLLAGDFRDRHYNTASTLLGLGVFTSILGGFNTFFRSGKLFPGPHLYAGAGITVLWAVAASMVPAMQKGNETARSLHIGLNALNLALFAWQVGTGLEIAIK 314
            KP  +  +K S    +P L  P+      LK+ +  +T +A P  L   DA+A GGE+G+LEGR+FA +HPIVMG LF  T + GYLGWQ+R +RT+  E++ LK                 KQ+    +A     EG   A+          +  ++ ++ ++  L+E+RK LL G FRDRH+N  S LLG GV  S+ GG NT+FR+GKLFPGPHL+AGAGITVLWAVAA++VPAMQKGNETAR+LHI LNALN+ LF WQ+ TG++I  K
Sbjct:   26 KPTKILLSKHS--DHLPQLLKPLQHTIHQLKSSSLSLTALALPFFLHPEDALAAGGEFGLLEGRTFALIHPIVMGGLFFYTLWAGYLGWQWRRVRTIQNEINELK-----------------KQVKPAPAA---AAEGTPSAEA---------TASMSPVEVKIKQLTEERKELLKGSFRDRHFNAGSILLGFGVLESVGGGLNTWFRTGKLFPGPHLFAGAGITVLWAVAAALVPAMQKGNETARNLHIALNALNVLLFIWQIPTGIDIVFK 267          
BLAST of EWM25307.1 vs. NCBI_GenBank
Match: gi|1179578306|ref|XP_020674228.1| (uncharacterized protein LOC110093628 [Dendrobium catenatum])

HSP 1 Score: 238.424 bits (607), Expect = 2.308e-73
Identity = 121/234 (51.71%), Postives = 157/234 (67.09%), Query Frame = 0
Query:   81 FVAPLVLGASDAMAKGGEYGILEGRSFAFVHPIVMGALFLTTAYTGYLGWQFRTIRTLAGEMSALKDSLPKLSDGSKVTLPVSKQIASVESALKNMGEGDEEAKQLKADLNLLRSPGVAVLDTQMAALSEKRKTLLAGDFRDRHYNTASTLLGLGVFTSILGGFNTFFRSGKLFPGPHLYAGAGITVLWAVAASMVPAMQKGNETARSLHIGLNALNLALFAWQVGTGLEIAIK 314
            F  P  +   DA+A GGE+GILEGRSFA +HP+VMG LF  T +TGYLGWQ+R +RT+  E++ LK  +       K  +P +     VES         E A   +A         ++ ++ +++ LSE+RK LL G FRDRH+N  S LLG GVF S+ G  NT+FR+GKLFPGPHL+AGAGITVLWA+AA++VP MQKGNETAR+LHI LNALN+ LF WQ+ TG++I  K
Sbjct:   60 FSLPEFIIPPDALAVGGEFGILEGRSFALIHPLVMGGLFFYTVWTGYLGWQWRRVRTIQEEINELKKQV-------KSPVPAAVAAGGVESG------SQEPAPPPQA--------AISSVERKISQLSEERKELLKGGFRDRHFNAGSILLGFGVFESVGGAVNTWFRTGKLFPGPHLFAGAGITVLWALAAALVPLMQKGNETARNLHIALNALNVLLFIWQIPTGIDIVFK 272          
BLAST of EWM25307.1 vs. NCBI_GenBank
Match: gi|672157366|ref|XP_008798388.1| (PREDICTED: uncharacterized protein LOC103713288 [Phoenix dactylifera])

HSP 1 Score: 237.269 bits (604), Expect = 6.643e-73
Identity = 131/280 (46.79%), Postives = 171/280 (61.07%), Query Frame = 0
Query:   35 LPSLSRVHAQKPYHVFDTKESFAPTIPGLPVSPEALDLKTIAQGVTFVAPLVLGASDAMAKGGEYGILEGRSFAFVHPIVMGALFLTTAYTGYLGWQFRTIRTLAGEMSALKDSLPKLSDGSKVTLPVSKQIASVESALKNMGEGDEEAKQLKADLNLLRSPGVAVLDTQMAALSEKRKTLLAGDFRDRHYNTASTLLGLGVFTSILGGFNTFFRSGKLFPGPHLYAGAGITVLWAVAASMVPAMQKGNETARSLHIGLNALNLALFAWQVGTGLEIAIK 314
            LP LSR H+  P+         +   P LP +  AL L           PL L   DA+A GGE+GILEGR+ + +HP+VMG+LF  T + GYLGWQ+R +RT+  E++ LK  +              K  A   +A+    +G  EA    A         ++ ++ ++  L+E+RK L+ G +RDRHYN  S LLG GVF S+ GG NT+FRSGKLFPGPHL+AGA ITVLWA AA++VPAMQKGNETAR+LHI LNALN+ LF WQ+ TG EI +K
Sbjct:   30 LPLLSRTHSPLPHLEHAALHFLSKAFP-LPATAAALSL-----------PLFLDPKDALAVGGEFGILEGRTLSLIHPVVMGSLFFYTLWAGYLGWQWRRVRTIQDEINELKKQV--------------KAPAQPAAAVAAGADGTREAPPPTA--------AISPVEAKIQQLTEERKMLIKGSYRDRHYNAGSILLGFGVFESVGGGLNTWFRSGKLFPGPHLFAGAAITVLWAAAAALVPAMQKGNETARNLHIALNALNVLLFIWQIPTGFEIVLK 275          
BLAST of EWM25307.1 vs. NCBI_GenBank
Match: gi|1029098471|ref|XP_016708555.1| (PREDICTED: uncharacterized protein LOC107922861 [Gossypium hirsutum])

HSP 1 Score: 236.498 bits (602), Expect = 8.163e-73
Identity = 136/285 (47.72%), Postives = 177/285 (62.11%), Query Frame = 0
Query:   31 VKARLPSLSRVHAQKPYHVFDTKESFAPTIPGLPVSPEALDLKTIAQGVTFVA-PLVLGASDAMAKGGEYGILEGRSFAFVHPIVMGALFLTTAYTGYLGWQFRTIRTLAGEMSALKDSLPKLSDGSKVTLPVSKQIASVESALKNMGEGDEEAKQLKADLNLLRSPGVAVLDTQMAALSEKRKTLLAGDFRDRHYNTASTLLGLGVFTSILGGFNTFFRSGKLFPGPHLYAGAGITVLWAVAASMVPAMQKGNETARSLHIGLNALNLALFAWQVGTGLEIAIK 314
            ++++LP LS      P   F   ESF P  P L  +     LK+ +  +T +A P +  A DA+A GGE+GILEGRSFA VHPIVMG LF  T + GYLGWQ+R +RT+  E++ LK  +       K T PV+ +   VE+A                      SP    ++ ++  LSE+RK LL G +RDRH+N  S LLG GV  ++ GG NT+FR+GKLFPGPHL+AGA ITVLWA AA +VPAMQKG+ETARSLHI LNA+N+ LF WQ+ TG++I  K
Sbjct:   20 LQSKLPLLS-----NPTKQFICNESFNP--PKL-FAETVHHLKSASLPLTTLAFPFLFDAEDALAVGGEFGILEGRSFALVHPIVMGGLFFYTLWAGYLGWQWRRVRTIQNEINELKKQV-------KPT-PVTPEGKPVEAA---------------------PSP----VELEIQKLSEERKELLKGSYRDRHFNAGSILLGFGVLEAVGGGVNTWFRTGKLFPGPHLFAGAAITVLWAAAAGLVPAMQKGSETARSLHIALNAVNVILFIWQIPTGIDIVFK 263          
BLAST of EWM25307.1 vs. NCBI_GenBank
Match: gi|802694311|ref|XP_012083140.1| (uncharacterized protein LOC105642803 [Jatropha curcas] >gi|643716816|gb|KDP28442.1| hypothetical protein JCGZ_14213 [Jatropha curcas])

HSP 1 Score: 236.498 bits (602), Expect = 9.910e-73
Identity = 122/234 (52.14%), Postives = 157/234 (67.09%), Query Frame = 0
Query:   81 FVAPLVLGASDAMAKGGEYGILEGRSFAFVHPIVMGALFLTTAYTGYLGWQFRTIRTLAGEMSALKDSLPKLSDGSKVTLPVSKQIASVESALKNMGEGDEEAKQLKADLNLLRSPGVAVLDTQMAALSEKRKTLLAGDFRDRHYNTASTLLGLGVFTSILGGFNTFFRSGKLFPGPHLYAGAGITVLWAVAASMVPAMQKGNETARSLHIGLNALNLALFAWQVGTGLEIAIK 314
            F  P+ L   DA+A GGE+GILEGR+FA +HP+VMG LF  T + GYLGWQ+R +RT+  E++ LK  +       K T PV+ +   VE+A                      SP    +D ++  L+E+RK L+ G F+DRH+N  S LLG GVF SI GGFNT+ R+GKLFPGPHL+AGAGIT+LWA AA++VPAMQKGNETAR+LHI LNALN+ LF WQ+ TGL+I +K
Sbjct:   64 FAFPIFLDTKDALAVGGEFGILEGRTFALIHPLVMGGLFFYTLWAGYLGWQWRRVRTIQNEINELKKQV-------KPT-PVTPEGTPVEAA---------------------PSP----IDLKVQQLTEERKELIKGSFKDRHFNAGSILLGFGVFESIAGGFNTWLRTGKLFPGPHLFAGAGITILWAAAAALVPAMQKGNETARNLHIALNALNVLLFIWQIPTGLDIVLK 264          
BLAST of EWM25307.1 vs. NCBI_GenBank
Match: gi|255638086|gb|ACU19357.1| (unknown [Glycine max] >gi|734363196|gb|KHN16417.1| hypothetical protein glysoja_033821 [Glycine soja])

HSP 1 Score: 235.343 bits (599), Expect = 3.259e-72
Identity = 124/257 (48.25%), Postives = 160/257 (62.26%), Query Frame = 0
Query:   65 VSPEALDLKTIA----QGVTFVAPLVLGASDAMAKGGEYGILEGRSFAFVHPIVMGALFLTTAYTGYLGWQFRTIRTLAGEMSALKDSL---PKLSDGSKVTLPVSKQIASVESALKNMGEGDEEAKQLKADLNLLRSPGVAVLDTQMAALSEKRKTLLAGDFRDRHYNTASTLLGLGVFTSILGGFNTFFRSGKLFPGPHLYAGAGITVLWAVAASMVPAMQKGNETARSLHIGLNALNLALFAWQVGTGLEIAIK 314
            VSP  +D    A      +TF  PL+L   DA+A GGE+GILEGRSFA +HPIVMG+ FL T + GYLGWQ+R +RT+  +++ LK  +   P   DG  V                      EEA     +L             Q+  L+E+RK L+ G ++DRH+N  S LLG GV  SI GG NT+FR+GKLFPGPHL+AGA ITVLWA+AA++VP+MQKGNETAR+LHI LNA+N+ LF WQ+ TG++I  K
Sbjct:   45 VSPNNIDALKPAFLSLSAITF--PLLLETKDALAVGGEFGILEGRSFALIHPIVMGSFFLYTLWAGYLGWQWRRVRTIQNDINDLKKQVKPTPVTPDGKPV----------------------EEASPSPVEL-------------QIQQLTEERKELIKGSYKDRHFNAGSILLGFGVLESIGGGVNTWFRTGKLFPGPHLFAGAAITVLWALAAALVPSMQKGNETARNLHIALNAVNVLLFVWQIPTGIDIVFK 264          
BLAST of EWM25307.1 vs. NCBI_GenBank
Match: gi|593693638|ref|XP_007147340.1| (hypothetical protein PHAVU_006G115700g [Phaseolus vulgaris] >gi|561020563|gb|ESW19334.1| hypothetical protein PHAVU_006G115700g [Phaseolus vulgaris])

HSP 1 Score: 234.572 bits (597), Expect = 5.457e-72
Identity = 125/254 (49.21%), Postives = 157/254 (61.81%), Query Frame = 0
Query:   64 PVSPEALDLKTIAQGVTFVAPLVLGASDAMAKGGEYGILEGRSFAFVHPIVMGALFLTTAYTGYLGWQFRTIRTLAGEMSALKDSL---PKLSDGSKVTLPVSKQIASVESALKNMGEGDEEAKQLKADLNLLRSPGVAVLDTQMAALSEKRKTLLAGDFRDRHYNTASTLLGLGVFTSILGGFNTFFRSGKLFPGPHLYAGAGITVLWAVAASMVPAMQKGNETARSLHIGLNALNLALFAWQVGTGLEIAIK 314
            P+ P  L L  I    TF  PL L + DA+A GGE+GI EGRSFA VHPIVMGA F  T + GYLGWQ+R +RT+  +++ LK  +   P   DG  V                      EEA     +L             Q+  L+E+RK L+ G ++DRH+N  S LLG GV  SI GG NT+ R+GKLFPGPHL+AGAGITVLWA+AA++VP+MQKGNETAR+LHI LNALN+ LF WQ+ TG++I  K
Sbjct:   56 PLKPVFLSLTAI----TF--PLFLDSKDALAAGGEFGIFEGRSFALVHPIVMGAFFFYTLWAGYLGWQWRRVRTIQNDINELKTQVKPTPVTPDGKPV----------------------EEASPSPVEL-------------QIQQLTEERKELIKGSYKDRHFNAGSLLLGFGVLESIGGGVNTWLRTGKLFPGPHLFAGAGITVLWALAAALVPSMQKGNETARNLHIALNALNVLLFVWQIPTGIDIVFK 268          
BLAST of EWM25307.1 vs. NCBI_GenBank
Match: gi|685365492|ref|XP_009116855.1| (PREDICTED: uncharacterized protein LOC103842007 [Brassica rapa] >gi|923716367|ref|XP_013663920.1| PREDICTED: uncharacterized protein LOC106368490 [Brassica napus] >gi|674875139|emb|CDY57873.1| BnaA09g55550D [Brassica napus])

HSP 1 Score: 234.187 bits (596), Expect = 6.875e-72
Identity = 128/262 (48.85%), Postives = 165/262 (62.98%), Query Frame = 0
Query:   58 PTIPGLPVSPEALDL-KTIAQGVTFVA-PLVLGASDAMAKGGEYGILEGRSFAFVHPIVMGALFLTTAYTGYLGWQFRTIRTLAGEMSALKDSL---PKLSDGSKVTLPVSKQIASVESALKNMGEGDEEAKQLKADLNLLRSPGVAVLDTQMAALSEKRKTLLAGDFRDRHYNTASTLLGLGVFTSILGGFNTFFRSGKLFPGPHLYAGAGITVLWAVAASMVPAMQKGNETARSLHIGLNALNLALFAWQVGTGLEIAIK 314
            P IP LP  P AL L K+ +  +   A P ++   DA A GG++GILEGRSFA +HPIVMG LF+ T Y GYLGWQ+R +RT+  E++ LK  +   P   DGS V          V+S+                      SP  A  + ++  L+E+RK L+ G +RD+H++  S LLG GV  S+ GG NT+ R+GKLFPGPHLYAGAGITVLWA AA++VPAMQKGNETAR+LHI LN LN+ LF WQ+ TG +I +K
Sbjct:   36 PKIPELPSIPNALQLLKSSSLPLALTALPFLIDPQDAAAAGGQFGILEGRSFALIHPIVMGGLFVYTLYAGYLGWQWRRVRTIQSEINELKKQVKPTPVSPDGSTV----------VDSS----------------------SPPSAT-ELEIRRLTEERKELVKGSYRDKHFDAGSVLLGFGVLESVFGGLNTYLRTGKLFPGPHLYAGAGITVLWAAAAALVPAMQKGNETARNLHIALNGLNVLLFIWQIPTGFDIVLK 264          
BLAST of EWM25307.1 vs. NCBI_GenBank
Match: gi|1035919375|gb|OAY48965.1| (hypothetical protein MANES_05G019200 [Manihot esculenta])

HSP 1 Score: 233.417 bits (594), Expect = 1.374e-71
Identity = 138/296 (46.62%), Postives = 184/296 (62.16%), Query Frame = 0
Query:   20 LQRVDAFIGAGVKARLPSLSRVHAQKPYHVFDTKES-FAPTIPGLPVSPEALDLKTIAQGVTFVAPLVLGASDAMAKGGEYGILEGRSFAFVHPIVMGALFLTTAYTGYLGWQFRTIRTLAGEMSALKDSLPKLSDGSKVTLPVSKQIASVESALKNMGEGDEEAKQLKADLNLLRSPGVAVLDTQMAALSEKRKTLLAGDFRDRHYNTASTLLGLGVFTSILGGFNTFFRSGKLFPGPHLYAGAGITVLWAVAASMVPAMQKGNETARSLHIGLNALNLALFAWQVGTGLEIAIK 314
            L R   FI + + + LP   R+ A K    F+++ + F+ T   LP S     L+  A    F  P +L A DA+A GGE+GILEGR+FA +HPIVMG LF  T + GYLGWQ+R +RT+  E++ LK  +       K T PV+ +   VE+A                      SP    ++ ++  L+E+RK L+ G ++DRH+N  S LLG GVF +I GG NT+FR+GKLFPGPHL+AGAGITVLWA AA++VPAMQKGNETAR+LHI LNALN+ LF WQ+ TG++I  K
Sbjct:   13 LPRTPPFIHSKLPS-LPKQPRLDACK--KDFNSRLNLFSQTTHHLPSS----SLRLTA----FTFPFLLDAKDALAAGGEFGILEGRTFALIHPIVMGFLFFYTLWAGYLGWQWRRVRTIQNEINELKKQV-------KPT-PVTPEGTPVEAA---------------------PSP----VEIKIQQLTEERKELIKGSYKDRHFNAGSILLGFGVFEAIGGGVNTWFRTGKLFPGPHLFAGAGITVLWAAAAALVPAMQKGNETARNLHIALNALNVLLFVWQIPTGIDIVFK 264          
The following BLAST results are available for this feature:
BLAST of EWM25307.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585107062|gb|EWM25307.1|0.000e+0100.00uncharacterized protein Naga_100135g15 [Nannochlor... [more]
gi|720036761|ref|XP_010267460.1|1.349e-7347.25PREDICTED: uncharacterized protein LOC104604693 [N... [more]
gi|1179578306|ref|XP_020674228.1|2.308e-7351.71uncharacterized protein LOC110093628 [Dendrobium c... [more]
gi|672157366|ref|XP_008798388.1|6.643e-7346.79PREDICTED: uncharacterized protein LOC103713288 [P... [more]
gi|1029098471|ref|XP_016708555.1|8.163e-7347.72PREDICTED: uncharacterized protein LOC107922861 [G... [more]
gi|802694311|ref|XP_012083140.1|9.910e-7352.14uncharacterized protein LOC105642803 [Jatropha cur... [more]
gi|255638086|gb|ACU19357.1|3.259e-7248.25unknown [Glycine max] >gi|734363196|gb|KHN16417.1|... [more]
gi|593693638|ref|XP_007147340.1|5.457e-7249.21hypothetical protein PHAVU_006G115700g [Phaseolus ... [more]
gi|685365492|ref|XP_009116855.1|6.875e-7248.85PREDICTED: uncharacterized protein LOC103842007 [B... [more]
gi|1035919375|gb|OAY48965.1|1.374e-7146.62hypothetical protein MANES_05G019200 [Manihot escu... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna5371rna5371Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications