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Properties
| Property Name | Value |
|---|
| Product | Heat shock chaperonin-binding protein |
| Orig transcript id | gnl|cribi|Naga_100281g4.5084.mrna |
| Orig protein id | gnl|cribi|Naga_100281g4.5084 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002465.1 | supercontig | CM002465.1:817685..819883 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna5367 ID=rna5367|Name=rna5367|organism=Nannochloropsis gaditana|type=mRNA|length=3778bp
CTGGTAATGTGGCGTAGACGAGTGTCACCAAAAGAGTAAGGAAATGGATG
GTAATCTCTCTCTCCCCCCCCCTCCTAGGGTACAGAAATCGGAAGGACGC
ACACCAGCTTTCTTGCCTACACCTACCACCAGCACGATGAAAATAACAAC
ACCACAGATTACATGGCATGGAGGCGAGGCTGGTAAGAATGATCCAGTGT
TGAGTGCGGATGTACATCCCTGCGGTGTTCTTGCCACGGGGGGGGCAGAC
GCGGAGGTGCGGGTAAGTCGATTTGGGCGATCGATAGGGGAGGCCGATAA
AGAAAGAGGGGATGGCAAATATGTGGAGTGCACGTGCATCTGTCATACAT
TCATCGGCCGCAAATGCTGTTCATCATGCTTTACGAGCCTGAGAGGGCGG
GGAAGGCGGCACTTTCTTCCCTCCTTGGTCGCCATCAGAGGCTGAGGCAG
TCTTCTCTCTGAAAGTGATTGGTTACCTCTTCAACTCCCCGCGATGACCG
CTGTGCCCTATCTATGCAGCATGAAACTTGATCATGGTTTCCTCCTTTTC
TTTCTCCCCCCCGCAATTTCAGCTTTGGCTTCTCCACCTGGACGAGAACG
AGGAGAGCAAATTTCAAGACTACCTCTACAATTTCGAAAATCACCAACGC
TCCGTCAACAGCGTGCGCTTCTCGCCGGATGGACGCGCGCTCGCGACTGC
AAGTGACGGGGGCGTGATCTTCGTCTACCTCCTTCCCCCCGGGCGCCCCA
CCCGCTTTTGGCGACGGCCCATGTGCCAGCGGATGGTCCTCTGCCGCCTG
GTTCGGACCACGCAGTCCGACATCTACGACCTAGCCTGGTCCCCGTCCTC
GCGGGAGCTCTGCAGCGTCTCGGTGGACAGCAAGGTGGCGGTGTGGGACG
TGACGGGCGAGAAGAGCCCCTTGCTTTCCACCTTCACCAGTCACAGCAAC
TATGTCCAGGGCGCCTGCTGGGACCCGGCGGACGAATTTTTGGTCTCTCA
GAGCAACGATCGGAGCTGCAGGGTGTACGTGAGGAAGGAGTTGAGGGGAG
GGAAGAAGAAGCGGAAAAAGAAGAAAGGGGAGGAGGGGGGGAAGGAAGGG
AAGGAGGAGGCAGCGCCGCCCACCGAGTGGGTGGAGCAGGGACTGCTGCG
TCTCGCCTGCCGTGAGGAAGGTGGTGGGGAGGAGGAAGAGGAAGCGGGGC
GGGAGATGAGCAAGCTGGTTCCGGTTGCGTCCTCGACGCCAGTGGTGCCA
GTGGAGAGAAAAGCCGGTCAGGGACATCGGGGAGGGGGGCATGGAGGAGG
GAAGAGGGAAGACCACGTCGCCGGCGAGCACGCGCCGGCTCTGAAGCAGG
CGGGAACACCCGTGGGCAAGGAGGGAGAGGAAAAAAAGCCAGAAGAGACG
GGGGCGGTGGAGACGGAGCTCTCAGGGGTCGGTCAGGAGGGAGAGGAAGG
GAGGCAGGGCAGGATGGAGGGCGAGGTGAAAGAGCAGGGCGAGGAGGGGC
CCCGTCCTGGCCAAGGCGGCAAACCCGCGTCCAAACGTACCCCTCGCCTC
CACCTCTTTGCGGACGAGACCGTCCCGTCCTTCTTCCGCCGACCTGCCTG
GTCCCCGGACGGCTGCCTCCTCCTCACGCCCACGGGTCTTCTCCCTCCCT
CGGGGCACAGGGGCGGGCCCGAAGGAGACAACAAAGCCGGCGGCGACAGT
GCCCACACGCGTTTTTCCACGCACGTGTACGCGCGGGGGGCGTTCGCAAA
GCCTGTGCTCGAGCTGCCTCACCCGGGCGGAAAGGCTTCTGTCGTCGTCC
GCTTTTGCCCCCAACTTTTTGCCCTGAAAACCCAGGAGCGGAAAGACCTG
CCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCC
TTCCTTCCTGCCCGCCGGCACGCCCGCGGGGGAGGAGAAGACAGAGCCCT
CGCCCGATCCCCCTCCTTCTTTGACGAACCTGCCTTACCGGATGGTCTTC
GCGGTCTTGACCGTGGGCGGTATCTATGTGTACGACACCCAGCACCATTT
CCCTCTGGCAGTGGTGAAGAACTCGCACTACGCCCCCTTGACCGATGCAG
CCTGGGTCAATGACGGCTCCGCCCTGGTTGTTACCTCCATGGACGGATAC
GTGACGGTGGTGTGCCTCCCGGAAGGGGAGCTAGGGGCGAAGTTGGAGCT
GGAGAAAGTTCCAGGAACGGTCCGGCAGGTCCACGGGGCCCACTACGACG
GGATCAAGAGGGAAGCGGAGGAAAGGGAGGAGGAAGAGGAGGAAGAAGAG
CGTGAAGAAAGGGAGCGGAGGTCAGGGAGGGAAAAAGTGAGGGAGGAGGA
GGAGAAACGGAAGGCCAGGAGGCAACAAGAAGAATCGGGGGAGGAGGAGA
AAAGACGGGAGGTTCCAGTAGACCAATCCAGACAAGCTGGGGAGGTTATC
GATGTGTGTGACTCCGAAGAGGAGGACGGAATGGCAGAGGCGACAGCGAA
TTTGGAGGGGCCCTTGGGGGAGGGCGAAGAGGGAAGGAAGGATCCTCAGA
AAGGGAGGGGAGGGAGGACGGAGGAGGCGGGCATCCTTTCCGACAGCGAG
TCGCTTCACAGTGAAGAAGTCAGCGAGGAGGAGGATGACGAAGGGAATGG
ACAAAAGGAGGAAACAGGAGAGGGGGCGGTAGCAGGAGAGGGGGCGATAA
CTGAAGAAAGTGACGACGAGTGGGAGGAGAAGAGGATGGCGGTCACCACA
GGTACTGGGACTAAGAAGGGAGAGCACAACCATGCGCAGGAGGAAAGGCA
AGCGTGCCATGGCGTCAAGCGCAAGAGTGACGAGGGCGGCAACGAGGAAG
AAATGGTCCCACAAGTAGGAGAGAAGCAGGCCCAAGGCAAGAATGACGAT
CCCCAGTCCACTCTGACGCCGGGAAGGAAGACGCGAACGGTGCCAAGAGC
CAGTCCTTTCCATGCACAGGGGTCTCCCTCTGCAGCCCCGCCCAATTTGT
CGCATAGCAGCAGCGATGGCGCCGTATCAAGCGCACAGAAAAAGAAACGC
ATCCGTCCCACGCCCGTGGGGGAAAACCATGCTGCTGAGGTGTTTGCGGC
CGCGGCGGGCGTGGGCGAGGCGAGGTTGCCCGTCGCGCGGCTAATGACGG
AAGAAGGGAGCAGGAGCAGCTGTCAAGGGACAGGAGTCTTGAAGGAGGCC
AACAGTGGACCTGCTGCAGCGCCACTTAAGATCGCGGGAAAGGCAAGCAA
CAAGCCTGTGAAAAAACGCTTGGCACCCACACTGATCTCCTCTTCTCTGT
CCTGAGCTTGCGGAGGGAAGAAAAGTCAAGGATGCCGTAGAGAAGGGAGG
GCGTGGTGCGGAAGACTCACATCTCACATGAGGGTCCTAGCAATACGCGA
AAAGAGTCGCTTAAAGGTAAAGCGGAGCGATACCGCTCATTTCGACGGCG
GTATCGCCCTTGTCCGTCCACACAAAGTCAAGAATGTGTGGCAAAGAGCA
GAGCGGCATCCTCGGGTGAGTATGGAGTAGAGAAGGACAATGCTGGAGGG
AGAAGACTGTCCAATAGGGAAACTGAAATGAAACGTTTTCAGAAAAGGTA
GTGAGCAATGAGACCTGGATTGTTATGATTGATGGAGGAGGTCTTATATG
TGTAGAGAGATATCAGCTTACTGCGTGAGCAAGTCTTCATGACCAAGCTT
ACGAGCGAGACAATAACAAGACGAAGAGGGGCGGTGCATCAATCGATGAA
GCATTATACACCAAAGAAAAAATTCTTC back to topprotein sequence of rna5367 >rna5367-protein ID=rna5367-protein|Name=rna5367|organism=Nannochloropsis gaditana|type=polypeptide|length=260bp
MSRPASFLRPVALLLGVLVLFLVSSSADALFSKLAKKKKQQEQQHEEKAF
TGTESANMGLEAFQDLFANPSGMQELMNMQKDPEIMREVEALLEDPEFQA
YMAEYMNSDAVKESLKMAEKLANDPKALEAFQSKMLAAMQGNAEDGTESA
RTGLETLAASVQDPSGLMQAMDMLKDPAVVKEVESLMADPDFQREMKKMA
ESPMFAEAMQQAQALTEELQKDPAKLEAFMKDLESEMAKMGGAAGLPMGK
AGAGRGRVEL back to topmRNA from alignment at CM002465.1:817685..819883+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna5367 ID=rna5367|Name=rna5367|organism=Nannochloropsis gaditana|type=mRNA|length=2199bp|location=Sequence derived from alignment at CM002465.1:817685..819883+ (Nannochloropsis gaditana)
AGCTGCAGGCACTTGTCAGGCCACTTTATGAGCTGAAACACGACGCCCGC
GGGAAGAAGTTGACGTACGAAAGTCTTAAGTGTCTTATTCGTGCCCTTTT
GTTATTTGTGCCCTCTTAGGCAAATAAAAACGCATCATGAGTCGCCCAGC
ATCCTTTCTGAGGCCCGTGGCTTTGCTCTTGggggtcctcgtcctcttcc
ttgtctcttcctctgcggACGCCCTTTTCAGTAAACTGgccaaaaaaaag
aagcaacAGGAGCAACAACATGAAGAAAAAGCGTTTACAGGCACTGAAAG
CGCGAATATGGGACTTGAAGCCTTCCAAGACCTTTGTAAGTGATGCAATA
GATCGATCCATGGGGTGGGGGATGATTGTGTTATTGAAGCAAGACCTCTT
GATATGACTCGTGCATATTTTCTGTGCTAAGCATCATATATATATGACCT
CGATCTCCTTCATAAACCATTCTGCCTTTTTGGAAATGCTGTTTTATACT
ACCAGACGATCAACCCCAAGGATTCGAGGCCGTCGAGTCTTGACCTAGCT
TAatctctctctccatcccaTTCAGTTGCCAATCCCAGCGGCATGCAGGA
GCTCATGAACATGCAAAAAGATCCAGAGATCATGCGTGAGGTAGAGGCGC
TATTGGAGGACCCAGAATTCCAAGCTTACATGGCCGAGTAAGTGGTGATT
TTGTTTATCCCTCGGAACTTTTGAATAGTCAGTCGTTCTATGAAAGGACC
GAAAATGGATTGATGAGTCTTACACGGGTATTACAGATCTCTCTGTTTCC
CTCAATCATCACTGCGTCTTACGTATCGTCTTCGAGCTAATCTGCTCCtc
tcacttccccctcccagatACATGAACAGCGACGCTGTCAAGGAGTCGTT
AAAAATGGCGGAAAAGCTGGCCAATGACcccaaggccctggaggccttcC
AATCCAAAATGCTGGCGGCCATGCAAGGCAATGCGGAGGATGGCACGGAG
TCGGCACGCACGGGACTGGAGaccctggccgcctcggTCCAAGACCCCTC
AGGACTCATGCAGGCCATGGACATGCTCAAGGACCCGGCGGTcgtcaagg
aggtggagtcCCTGGTAATTTTGTGGACGGGCTATTTCTCTCCGCCGCTT
TTCTTTCACCCCAccttctcaccctttccatctccctcctccccctaaGC
TCCCCCTGACTCTCGTCGCTCCTTGCGCAGAGGCCTTTCACGCGCTGATG
TCCGTTCTTCCCCTTATTCTCTCGATCTTCTTCAGATGGCGGATCCGGAC
TTCCAGCGCgagatgaagaagatggcaGAATCTCCGATGTTTGCGGAGGC
CATGCAACAGGCCCAAGCCTTGACCGtaagctctccctccctcctcttcc
cctccctccttccctcccttcctccccaccttttcGGGTCCTTTTTTCGT
AGTCAGCAGACACCTGCACCAGTTCCGACTTTTATTTACCATCCATtcag
gaggagctgcagaaggACCCTGCGAAACTGGAGGCCTTCATGAAGGACCT
CGAGAGTGAGATGGCCAAGATGGGGGGCGCGGCGGGGCTCCCCAtgggca
aggcaggggcggggcggggccgggtgGAGCTGTAGAGGAGAAGATTGACG
ACggcaagagggcgggggagagggacaggggggatAGCTGGCAGACACAG
GCGAGCCAGGTGATGAGCTCACCTGCGGGGGACGCCTGGGGCGCGAAGGG
GGAATGTTGGGCGCGAGGAAAGCTCGACAGAGAATCTGGCTGTGAGAAAC
CGTtaagggcatggaggagaaggggtggagaggggtCAATGGGAAAGTTA
GTTGTCCGGCTTGCATGCGTGTGGCcatgggaagagaaggacacgGGCTG
GACAGATGGCTTTGCGGcttgagagaaagaagaaactCAGAGCAAACGGC
AGGCCACAGGAAGGCAGAAAGACATCGGATGTtcaagggaaggggaagta
cGGTGGTGATGATTATTGAGTGGAAAGAGAGTAGCGCGGGATCGACGTTA
CTAGGGCAAAGTAGAggcaaaggggaaggcagagaAGTGGAGAATTAAAT
GGGCCGCCACCAGCCTCCCGAAACAGGGGGAGAAGCACTCAAGGAGCGTC
TCGCGAGCCCATTTCTCAAACACAAATACGGTTGCAGTCTAACTTTAGC back to topCoding sequence (CDS) from alignment at CM002465.1:817685..819883+ >rna5367 ID=rna5367|Name=rna5367|organism=Nannochloropsis gaditana|type=CDS|length=3915bp|location=Sequence derived from alignment at CM002465.1:817685..819883+ (Nannochloropsis gaditana)
ATGAGTCGCCCAGCATCCTTTCTGAGGCCCGTGGCTTTGCTCTTGggggt
cctcgtcctcttccttgtctcttcctctgcggACGCCCTTTTCAGTAAAC
TGgccaaaaaaaagaagcaacAGGAGCAACAACATGAAGAAAAAGCGTTT
ACAGGCACTGAAAGCGCGAATATGGGACTTGAAGCCTTCCAAGACCTTTT
TGCCAATCCCAGCGGCATGCAGGAGCTCATGAACATGCAAAAAGATCCAG
AGATCATGCGTGAGGTAGAGGCGCTATTGGAGGACCCAGAATTCCAAGCT
TACATGGCCGAatACATGAACAGCGACGCTGTCAAGGAGTCGTTAAAAAT
GGCGGAAAAGCTGGCCAATGACcccaaggccctggaggccttcCAATCCA
AAATGCTGGCGGCCATGCAAGGCAATGCGGAGGATGGCACGGAGTCGGCA
CGCACGGGACTGGAGaccctggccgcctcggTCCAAGACCCCTCAGGACT
CATGCAGGCCATGGACATGCTCAAGGACCCGGCGGTcgtcaaggaggtgg
agtcCCTGATGGCGGATCCGGACTTCCAGCGCgagatgaagaagatggca
GAATCTCCGATGTTTGCGGAGGCCATGCAACAGGCCCAAGCCTTGACCga
ggagctgcagaaggACCCTGCGAAACTGGAGGCCTTCATGAAGGACCTCG
AGAGTGAGATGGCCAAGATGGGGGGCGCGGCGGGGCTCCCCAtgggcaag
gcaggggcggggcggggccgggtgGAGCTGTAGATGAGTCGCCCAGCATC
CTTTCTGAGGCCCGTGGCTTTGCTCTTGggggtcctcgtcctcttccttg
tctcttcctctgcggACGCCCTTTTCAGTAAACTGgccaaaaaaaagaag
caacAGGAGCAACAACATGAAGAAAAAGCGTTTACAGGCACTGAAAGCGC
GAATATGGGACTTGAAGCCTTCCAAGACCTTTTTGCCAATCCCAGCGGCA
TGCAGGAGCTCATGAACATGCAAAAAGATCCAGAGATCATGCGTGAGGTA
GAGGCGCTATTGGAGGACCCAGAATTCCAAGCTTACATGGCCGAatACAT
GAACAGCGACGCTGTCAAGGAGTCGTTAAAAATGGCGGAAAAGCTGGCCA
ATGACcccaaggccctggaggccttcCAATCCAAAATGCTGGCGGCCATG
CAAGGCAATGCGGAGGATGGCACGGAGTCGGCACGCACGGGACTGGAGac
cctggccgcctcggTCCAAGACCCCTCAGGACTCATGCAGGCCATGGACA
TGCTCAAGGACCCGGCGGTcgtcaaggaggtggagtcCCTGATGGCGGAT
CCGGACTTCCAGCGCgagatgaagaagatggcaGAATCTCCGATGTTTGC
GGAGGCCATGCAACAGGCCCAAGCCTTGACCgaggagctgcagaaggACC
CTGCGAAACTGGAGGCCTTCATGAAGGACCTCGAGAGTGAGATGGCCAAG
ATGGGGGGCGCGGCGGGGCTCCCCAtgggcaaggcaggggcggggcgggg
ccgggtgGAGCTGTAGATGAGTCGCCCAGCATCCTTTCTGAGGCCCGTGG
CTTTGCTCTTGggggtcctcgtcctcttccttgtctcttcctctgcggAC
GCCCTTTTCAGTAAACTGgccaaaaaaaagaagcaacAGGAGCAACAACA
TGAAGAAAAAGCGTTTACAGGCACTGAAAGCGCGAATATGGGACTTGAAG
CCTTCCAAGACCTTTTTGCCAATCCCAGCGGCATGCAGGAGCTCATGAAC
ATGCAAAAAGATCCAGAGATCATGCGTGAGGTAGAGGCGCTATTGGAGGA
CCCAGAATTCCAAGCTTACATGGCCGAatACATGAACAGCGACGCTGTCA
AGGAGTCGTTAAAAATGGCGGAAAAGCTGGCCAATGACcccaaggccctg
gaggccttcCAATCCAAAATGCTGGCGGCCATGCAAGGCAATGCGGAGGA
TGGCACGGAGTCGGCACGCACGGGACTGGAGaccctggccgcctcggTCC
AAGACCCCTCAGGACTCATGCAGGCCATGGACATGCTCAAGGACCCGGCG
GTcgtcaaggaggtggagtcCCTGATGGCGGATCCGGACTTCCAGCGCga
gatgaagaagatggcaGAATCTCCGATGTTTGCGGAGGCCATGCAACAGG
CCCAAGCCTTGACCgaggagctgcagaaggACCCTGCGAAACTGGAGGCC
TTCATGAAGGACCTCGAGAGTGAGATGGCCAAGATGGGGGGCGCGGCGGG
GCTCCCCAtgggcaaggcaggggcggggcggggccgggtgGAGCTGTAGA
TGAGTCGCCCAGCATCCTTTCTGAGGCCCGTGGCTTTGCTCTTGggggtc
ctcgtcctcttccttgtctcttcctctgcggACGCCCTTTTCAGTAAACT
GgccaaaaaaaagaagcaacAGGAGCAACAACATGAAGAAAAAGCGTTTA
CAGGCACTGAAAGCGCGAATATGGGACTTGAAGCCTTCCAAGACCTTTTT
GCCAATCCCAGCGGCATGCAGGAGCTCATGAACATGCAAAAAGATCCAGA
GATCATGCGTGAGGTAGAGGCGCTATTGGAGGACCCAGAATTCCAAGCTT
ACATGGCCGAatACATGAACAGCGACGCTGTCAAGGAGTCGTTAAAAATG
GCGGAAAAGCTGGCCAATGACcccaaggccctggaggccttcCAATCCAA
AATGCTGGCGGCCATGCAAGGCAATGCGGAGGATGGCACGGAGTCGGCAC
GCACGGGACTGGAGaccctggccgcctcggTCCAAGACCCCTCAGGACTC
ATGCAGGCCATGGACATGCTCAAGGACCCGGCGGTcgtcaaggaggtgga
gtcCCTGATGGCGGATCCGGACTTCCAGCGCgagatgaagaagatggcaG
AATCTCCGATGTTTGCGGAGGCCATGCAACAGGCCCAAGCCTTGACCgag
gagctgcagaaggACCCTGCGAAACTGGAGGCCTTCATGAAGGACCTCGA
GAGTGAGATGGCCAAGATGGGGGGCGCGGCGGGGCTCCCCAtgggcaagg
caggggcggggcggggccgggtgGAGCTGTAGATGAGTCGCCCAGCATCC
TTTCTGAGGCCCGTGGCTTTGCTCTTGggggtcctcgtcctcttccttgt
ctcttcctctgcggACGCCCTTTTCAGTAAACTGgccaaaaaaaagaagc
aacAGGAGCAACAACATGAAGAAAAAGCGTTTACAGGCACTGAAAGCGCG
AATATGGGACTTGAAGCCTTCCAAGACCTTTTTGCCAATCCCAGCGGCAT
GCAGGAGCTCATGAACATGCAAAAAGATCCAGAGATCATGCGTGAGGTAG
AGGCGCTATTGGAGGACCCAGAATTCCAAGCTTACATGGCCGAatACATG
AACAGCGACGCTGTCAAGGAGTCGTTAAAAATGGCGGAAAAGCTGGCCAA
TGACcccaaggccctggaggccttcCAATCCAAAATGCTGGCGGCCATGC
AAGGCAATGCGGAGGATGGCACGGAGTCGGCACGCACGGGACTGGAGacc
ctggccgcctcggTCCAAGACCCCTCAGGACTCATGCAGGCCATGGACAT
GCTCAAGGACCCGGCGGTcgtcaaggaggtggagtcCCTGATGGCGGATC
CGGACTTCCAGCGCgagatgaagaagatggcaGAATCTCCGATGTTTGCG
GAGGCCATGCAACAGGCCCAAGCCTTGACCgaggagctgcagaaggACCC
TGCGAAACTGGAGGCCTTCATGAAGGACCTCGAGAGTGAGATGGCCAAGA
TGGGGGGCGCGGCGGGGCTCCCCAtgggcaaggcaggggcggggcggggc
cgggtgGAGCTGTAG back to top
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