EWM25318.1, cds5354 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM25318.1 vs. NCBI_GenBank
Match: gi|585107074|gb|EWM25318.1| (Heat shock chaperonin-binding protein [Nannochloropsis gaditana]) HSP 1 Score: 510.76 bits (1314), Expect = 0.000e+0 Identity = 260/260 (100.00%), Postives = 260/260 (100.00%), Query Frame = 0 Query: 1 MSRPASFLRPVALLLGVLVLFLVSSSADALFSKLAKKKKQQEQQHEEKAFTGTESANMGLEAFQDLFANPSGMQELMNMQKDPEIMREVEALLEDPEFQAYMAEYMNSDAVKESLKMAEKLANDPKALEAFQSKMLAAMQGNAEDGTESARTGLETLAASVQDPSGLMQAMDMLKDPAVVKEVESLMADPDFQREMKKMAESPMFAEAMQQAQALTEELQKDPAKLEAFMKDLESEMAKMGGAAGLPMGKAGAGRGRVEL 260 MSRPASFLRPVALLLGVLVLFLVSSSADALFSKLAKKKKQQEQQHEEKAFTGTESANMGLEAFQDLFANPSGMQELMNMQKDPEIMREVEALLEDPEFQAYMAEYMNSDAVKESLKMAEKLANDPKALEAFQSKMLAAMQGNAEDGTESARTGLETLAASVQDPSGLMQAMDMLKDPAVVKEVESLMADPDFQREMKKMAESPMFAEAMQQAQALTEELQKDPAKLEAFMKDLESEMAKMGGAAGLPMGKAGAGRGRVEL Sbjct: 1 MSRPASFLRPVALLLGVLVLFLVSSSADALFSKLAKKKKQQEQQHEEKAFTGTESANMGLEAFQDLFANPSGMQELMNMQKDPEIMREVEALLEDPEFQAYMAEYMNSDAVKESLKMAEKLANDPKALEAFQSKMLAAMQGNAEDGTESARTGLETLAASVQDPSGLMQAMDMLKDPAVVKEVESLMADPDFQREMKKMAESPMFAEAMQQAQALTEELQKDPAKLEAFMKDLESEMAKMGGAAGLPMGKAGAGRGRVEL 260
BLAST of EWM25318.1 vs. NCBI_GenBank
Match: gi|553186439|ref|XP_005854418.1| (hypothetical protein NGA_0231701 [Nannochloropsis gaditana CCMP526] >gi|422294644|gb|EKU21944.1| hypothetical protein NGA_0231701 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 501.901 bits (1291), Expect = 3.064e-179 Identity = 256/260 (98.46%), Postives = 256/260 (98.46%), Query Frame = 0 Query: 1 MSRPASFLRPVALLLGVLVLFLVSSSADALFSKLAKKKKQQEQQHEEKAFTGTESANMGLEAFQDLFANPSGMQELMNMQKDPEIMREVEALLEDPEFQAYMAEYMNSDAVKESLKMAEKLANDPKALEAFQSKMLAAMQGNAEDGTESARTGLETLAASVQDPSGLMQAMDMLKDPAVVKEVESLMADPDFQREMKKMAESPMFAEAMQQAQALTEELQKDPAKLEAFMKDLESEMAKMGGAAGLPMGKAGAGRGRVEL 260 MSRPASFLRPVALLLGVLVL LVSSSADALFSKLAKKKKQQEQQHE KAFTG ESANMGLEAFQDLFANPSGMQELMNMQKDPEIMREVEALLEDPEFQAYMAEYMNSDAVKESLKMAEKLANDPKALEAFQSKMLAAMQGNAEDGTESARTGLETLAASVQDPSGLMQAMDMLKDPAVVKEVESLMADPDFQREMKKMAESPMFAEAMQQAQALTEELQKDPAKLE FMKDLESEMAKMGGAAGLPMGKAGAGRGRVEL Sbjct: 1 MSRPASFLRPVALLLGVLVLVLVSSSADALFSKLAKKKKQQEQQHEGKAFTGIESANMGLEAFQDLFANPSGMQELMNMQKDPEIMREVEALLEDPEFQAYMAEYMNSDAVKESLKMAEKLANDPKALEAFQSKMLAAMQGNAEDGTESARTGLETLAASVQDPSGLMQAMDMLKDPAVVKEVESLMADPDFQREMKKMAESPMFAEAMQQAQALTEELQKDPAKLEVFMKDLESEMAKMGGAAGLPMGKAGAGRGRVEL 260
BLAST of EWM25318.1 vs. NCBI_GenBank
Match: gi|298710435|emb|CBJ25499.1| (expressed unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 82.4185 bits (202), Expect = 1.903e-15 Identity = 73/226 (32.30%), Postives = 107/226 (47.35%), Query Frame = 0 Query: 7 FLRPVALLLGVLVLFLVSSSADALFSKLAKKKKQQEQQHEEKAFTGTESANMGLEAFQDLFANPSGMQELMNMQKDPEIMREVEAL---LEDPEFQAYMAEYMNSDAVKESLKMAEKLANDPKALEAFQSK------MLAAMQGNAEDGTESARTGLETLAASVQDPSGLMQAMDMLKDPAVVKEVESLMADPDFQREMKKMAESPMFAEAMQQAQALTEELQKDP 223 F+ VA LLG S ADA KKK +E + TG ++ ++G F R+VE+ L D F+ M + M SD K A DPKA+EA K +AA G +DG A GL +AS+ DP+ + AM+M++DPAV+K+VE M +P+F ++MK++ ++P E + +A A EEL K+P Sbjct: 6 FIGVVATLLGF------SCRADAWG---GGKKKDEEPEMP----TGKDAVDLGRAGF-----------------------RQVESARDNLWDKNFKKEMNKLMESDEWKNGATDATDFLQDPKAMEAMAKKTKEYTDFIAA--GPGKDGKRDAAMGLNAASASMMDPNFMKDAMEMMQDPAVMKQVEETMKNPEFMKQMKEVMDNPAMKEQLAKAGANMEELMKNP 193
BLAST of EWM25318.1 vs. NCBI_GenBank
Match: gi|1210515070|dbj|GAX26033.1| (hypothetical protein FisN_4Hh468 [Fistulifera solaris]) HSP 1 Score: 80.1073 bits (196), Expect = 1.908e-13 Identity = 59/179 (32.96%), Postives = 91/179 (50.84%), Query Frame = 0 Query: 51 TGTESANMGLEAFQDLFANPSGMQELMNMQKDPEIMREVEALLEDPEFQAYMAEYMNSDAVKESLKMAEKLANDPKALEAFQSKMLAAMQGNAEDGTESARTGLETLAASVQDPSGLMQAMDMLKDPAVVKEVESLMADPDFQREMKKMAESPMFAEAMQQAQALTEELQKDPAKLEAF 229 T + +GLE + A+P+ + +LM +DPEIM E + ++E PEFQ M + S K++ K E+ NDP ++KM M+ E ++A G+E G M AM+ DP VV E+ ++ DP F +++K+M SP F QQ +E+ +DPAK F Sbjct: 20 TSADDVAIGLEGLRQAAADPAMLAQLMQDMQDPEIMAEAKKMMESPEFQKQMKKLSQSKEFKDTTKQFEQKMNDPNHAAQMEAKMEHMMKVGQEQLKKNAMQGVE----------GAMAAMN---DPQVVAEMSKMLKDPSFAKQLKEMQNSPEF----QQYVNAMQEMLQDPAKRAQF 181
BLAST of EWM25318.1 vs. NCBI_GenBank
Match: gi|1210516860|dbj|GAX24349.1| (hypothetical protein FisN_4Lh468 [Fistulifera solaris]) HSP 1 Score: 80.1073 bits (196), Expect = 2.026e-13 Identity = 61/179 (34.08%), Postives = 91/179 (50.84%), Query Frame = 0 Query: 51 TGTESANMGLEAFQDLFANPSGMQELMNMQKDPEIMREVEALLEDPEFQAYMAEYMNSDAVKESLKMAEKLANDPKALEAFQSKMLAAMQGNAEDGTESARTGLETLAASVQDPSGLMQAMDMLKDPAVVKEVESLMADPDFQREMKKMAESPMFAEAMQQAQALTEELQKDPAKLEAF 229 T + +GLE + A+P+ + +LM +DPEIM E + ++E PEFQ M + S K++ K E+ NDP ++KM M+ E ++A G+E G M AM+ DP VV E+ ++ DP F +++K+M SP F Q A+ E LQ DPAK F Sbjct: 457 TSADDVAIGLEGLRQAAADPAMLAQLMQDMQDPEIMAEAKKMMESPEFQKQMKKLSQSKEFKDTTKQFEQKMNDPNHAAQMEAKMEHMMKVGQEQLKKNAMQGVE----------GAMAAMN---DPQVVAEMSKMLKDPSFAKQLKEMQNSPEF---QQYVNAMQEMLQ-DPAKRAQF 618
BLAST of EWM25318.1 vs. NCBI_GenBank
Match: gi|1072227643|gb|OEU12382.1| (hypothetical protein FRACYDRAFT_191491 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 61.6178 bits (148), Expect = 4.433e-8 Identity = 45/168 (26.79%), Postives = 86/168 (51.19%), Query Frame = 0 Query: 59 GLEAFQDLFANPSGMQELMNMQKDPEIMREVEALLEDPEFQAYMAEYMNSDAVKESLKMAEKLANDPKALEAFQSKMLAAMQ-GNAEDGTESARTGLETLAASVQDPSGLMQAMDMLKDPAVVKEVESLMADPDFQREMKKMAESPMFAEAMQQAQALTEELQKDPAK 225 G+ ++ NP+ + +LM +DPE+M E + ++++P FQ M E N+ K++ K + + NDP A ++KM M+ GN + ++ + AA + +P V+ E++ ++ DP+FQ+++ +MA+ P MQ +++ KDP K Sbjct: 7 GMAGLKEATQNPALLAQLMRDLQDPELMAEAKKMMDNPNFQKQMKEMGNTKEFKDATKASVDMMNDPGQAAAMEAKMEHMMKVGNDQLKNKAGNVMEDAFAA--------------MGNPEVMAEMQKMIKDPNFQQQLNEMAKDP----NMQGYMDAMKDMMKDPEK 156
BLAST of EWM25318.1 vs. NCBI_GenBank
Match: gi|551566266|ref|XP_005769480.1| (hypothetical protein EMIHUDRAFT_445297 [Emiliania huxleyi CCMP1516] >gi|551597240|ref|XP_005780745.1| hypothetical protein EMIHUDRAFT_434721 [Emiliania huxleyi CCMP1516] >gi|485620448|gb|EOD17051.1| hypothetical protein EMIHUDRAFT_445297 [Emiliania huxleyi CCMP1516] >gi|485633445|gb|EOD28316.1| hypothetical protein EMIHUDRAFT_434721 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 62.7734 bits (151), Expect = 5.998e-8 Identity = 58/213 (27.23%), Postives = 96/213 (45.07%), Query Frame = 0 Query: 11 VALLLGVLVLFLVSSSADALFSKLAKKKKQQEQQHEEKAFTGTESANMGLEAFQDLFANPSGMQELMNMQKDPEIMREVEALLEDPEF-QAYMAEYMNSDAVKESLKMAEKLANDPKALEAFQSKM--------LAAMQGNAEDGTE---------------SARTGLETLAASVQDPSGLMQAMDMLKDPAVVKEVESLMADPDFQREMKKM 199 +A LL + L +A+A F + + K Q E A ++ + ++ L NP MQE+M KDPE+M + +L+DP++ +A A+ +A ++ M + N P A + M D +E +A G+ L + +DPS + M+M+KDP KEVE+LMADP F+ + ++M Sbjct: 1 MARLLTCVALICAPLAAEAQFGR--RNKMQGEASGIADATPPPSDVDIAMAGWEQLSRNPDKMQEVMQGMKDPEVMAKAAEMLKDPQYMKAAKAKLAELEAKAKARGMLDAQGN-PVPGMATATAMGQVPGGAAAMGGAAAMGDASEWELRNADRHKAGELNTAELGMANLQQAARDPSVMQGVMEMMKDPNTRKEVEALMADPAFKAQAQQM 210 The following BLAST results are available for this feature:
BLAST of EWM25318.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 7
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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