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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100281g8.5083.mrna |
| Orig protein id | gnl|cribi|Naga_100281g8.5083 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002465.1 | supercontig | CM002465.1:808005..809914 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna5363 ID=rna5363|Name=rna5363|organism=Nannochloropsis gaditana|type=mRNA|length=240bp
ATGCAGACATTTATTTCGTGTAAAATAAAGGAAATTCTGTTTGCTACGCA
CAAAAATTTAATTCGAACAGTTGAGAGGAATGACAACAAAGTTGAGGTAC
AGCTAGAAGTTCATCTGTTCGTATGGTGTGTTCATGCTCCCATGCTATCG
GAAAAACTATTATGGTTTCTAGACGCATTAGATAGTAAGGCATTTCGTGA
CACAATGCTGAATGACAAAAGTAAGTATGTATTGGGCTGA back to topprotein sequence of rna5363 >rna5363-protein ID=rna5363-protein|Name=rna5363|organism=Nannochloropsis gaditana|type=polypeptide|length=199bp
MRFHVIALLIGAVTACHAAESEKKGGPMQRVKRMMATDATAATATSAGEE
EDIQDSWSFDSVLSGARRLINGDHAGILADMSMGKEMQEIFENPEVSYQL
LQVFPMFKVLNGVKELSAKPKELFTKADSLSVLESYRNFVSTAIKNMKDM
ADPVGMATTMQKYSDAMSPVTQNPDGSHRALTEEERRMTELVRRVEVRI back to topmRNA from alignment at CM002465.1:808005..809914+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna5363 ID=rna5363|Name=rna5363|organism=Nannochloropsis gaditana|type=mRNA|length=1910bp|location=Sequence derived from alignment at CM002465.1:808005..809914+ (Nannochloropsis gaditana)
TATACCTTCAAAACGAGCCAGTCCTACGGGACCATAGCCTTGCTGGTCTA
ATCAGAGAAACGGGACCTGTAGTATATTTGGAGAGCAGCGAGGGGAATCA
CGCTCTTTTGCGTGTTTGTGCAAGGACAGAAGTATGGATGTTCTGCACTT
GCAGTGTCGTCTGTTGGCTCTCTGCAAGTGTGTCAACGGCGCGCACTCTA
ATGCTTGAGAGCCTGAAAATGAACTGCGAGGACAGTTCCTTTTCTTATGG
AACAGATACTGAATCCATCTTTCAAACGATCGAGCCATATTATATTCGAT
TGAGATCGTGTCAGTATCTGGTCCAAAGCCTCAATTTATggcgaagagag
agagggaccGTATGGATGTAACGACGGGATCCAATCAAGGAAAGGGAACA
CATCTACTTTGATCTCTCAAAGCATTGCAATGCATATGAAATATACATGT
GCGTCATCTCATTGAAATGTCCAATAGTATAGGGAGCAACCTGACTTTCC
AGAAGCAATGCGTTTTCATGTCATCGCCCTGCTAATAGGAGCAGTCACCG
CGTGCCACGCTGCAGAAagcgagaagaaaggcggtCCTATGCAGCGTGTC
AAACGTATGATGGCCACAGATGCAACTGCGGCTACAGCCACAAGTgctgg
agaagaggaggatatTCAGGACTCCTGGAGCTTCGACTCTGTCCTTAGTG
GTGCCAGACGCTTAATAAACGGCGACCATGCAGGCATCCTCGCTGACATG
AGCATGGGAAAAGAGATGCAAGAGATCTTTGAAAACCCGGAAGTCTCCTA
CCAATTGCTCCAAGGTACGCCAGTGACCCCCCGTTATGTACAATTTGGGT
AGCTTGCTTCCGTCGCCGTCATTCTCAAatgcttctctttctcctcttgc
aGTCTTTCCCATGTTCAAGGTTCTTAACGGGGTGAAAGAACTGAGCGCCA
AGCCCAAAGAATTATTCACAAAAGCTGATGTAAGTGAGGAGATAAGGTTT
AGGTGTACCTGCGAGCTTGGGAAATTTTATATACGTACCCTGCATCCCAC
TAAGCACAGCAACTCCcgtctttttttcccaaTCAACATGTAACAGAGCC
TTAGTGTCCTTGAGAGTTACCGAAACTTTGTCTCAACCGCTATTAAAAAT
ATGAAGGATATGGCGGATCCTGTGGGGATGGCCACCACCATGCAAAAGTA
CTCGGATGCCATGAGTCCTGTCACACAAAATCCGGATGGTTCCCACAGAG
CTTTGACAGAAGAAGAGAGACGTATGACGGAGCTTGTCCGACGCGTGGAG
GTACGAATCTAGAGAAGAGGATTTGCAATACCATCTATCCCGAACTCATC
TGTATTGCTCGTCGCATTCACACGCAGGAGGGCGACCCGGAAGCCACCGG
CCAGCTCCACGACAGGATTGCCGACAGCCTTTGGGGAAATAGTAAGTGGC
TTGAATCGAAAATTCGTATAATGACTGTTACTATTGTTTTGCTCACGCTT
AATTCGaatccttttcctccctgtcgctcCACTCAGCCATCGATTTGTCG
GAGTTCAAGGGCAAAGAACCCGAGGCTCTGAAGGTGCTCCGAGAGATCgt
catgaaggaggagcccaAGGTCTTCGACCTCATTACGGGCGAGGACCCGC
TCGTCAGAAAGTAAGTAAAAAATATCAGATCACACTTACGTCCAAGTCGA
TACTCACCATCCTCTCTTTCTGTGCACACAGAGTTCTTTCCGACCCCAGC
ATGCTCTTCGAGCTGGACACCATGGCGACGTAAAATTAAATGAAGTAAAT
GAGTCCATGCCTTGCAGCGCGAAGGGATGTCAAAAAAGCAAATGTCGGAA
AATAATTTTACCGTTataaggaaagaagaaagataTAACGTGTGCTTATT
CAAAAAATGG back to topCoding sequence (CDS) from alignment at CM002465.1:808005..809914+ >rna5363 ID=rna5363|Name=rna5363|organism=Nannochloropsis gaditana|type=CDS|length=1800bp|location=Sequence derived from alignment at CM002465.1:808005..809914+ (Nannochloropsis gaditana)
ATGCGTTTTCATGTCATCGCCCTGCTAATAGGAGCAGTCACCGCGTGCCA
CGCTGCAGAAagcgagaagaaaggcggtCCTATGCAGCGTGTCAAACGTA
TGATGGCCACAGATGCAACTGCGGCTACAGCCACAAGTgctggagaagag
gaggatatTCAGGACTCCTGGAGCTTCGACTCTGTCCTTAGTGGTGCCAG
ACGCTTAATAAACGGCGACCATGCAGGCATCCTCGCTGACATGAGCATGG
GAAAAGAGATGCAAGAGATCTTTGAAAACCCGGAAGTCTCCTACCAATTG
CTCCAAGTCTTTCCCATGTTCAAGGTTCTTAACGGGGTGAAAGAACTGAG
CGCCAAGCCCAAAGAATTATTCACAAAAGCTGATAGCCTTAGTGTCCTTG
AGAGTTACCGAAACTTTGTCTCAACCGCTATTAAAAATATGAAGGATATG
GCGGATCCTGTGGGGATGGCCACCACCATGCAAAAGTACTCGGATGCCAT
GAGTCCTGTCACACAAAATCCGGATGGTTCCCACAGAGCTTTGACAGAAG
AAGAGAGACGTATGACGGAGCTTGTCCGACGCGTGGAGGTACGAATCTAG
ATGCGTTTTCATGTCATCGCCCTGCTAATAGGAGCAGTCACCGCGTGCCA
CGCTGCAGAAagcgagaagaaaggcggtCCTATGCAGCGTGTCAAACGTA
TGATGGCCACAGATGCAACTGCGGCTACAGCCACAAGTgctggagaagag
gaggatatTCAGGACTCCTGGAGCTTCGACTCTGTCCTTAGTGGTGCCAG
ACGCTTAATAAACGGCGACCATGCAGGCATCCTCGCTGACATGAGCATGG
GAAAAGAGATGCAAGAGATCTTTGAAAACCCGGAAGTCTCCTACCAATTG
CTCCAAGTCTTTCCCATGTTCAAGGTTCTTAACGGGGTGAAAGAACTGAG
CGCCAAGCCCAAAGAATTATTCACAAAAGCTGATAGCCTTAGTGTCCTTG
AGAGTTACCGAAACTTTGTCTCAACCGCTATTAAAAATATGAAGGATATG
GCGGATCCTGTGGGGATGGCCACCACCATGCAAAAGTACTCGGATGCCAT
GAGTCCTGTCACACAAAATCCGGATGGTTCCCACAGAGCTTTGACAGAAG
AAGAGAGACGTATGACGGAGCTTGTCCGACGCGTGGAGGTACGAATCTAG
ATGCGTTTTCATGTCATCGCCCTGCTAATAGGAGCAGTCACCGCGTGCCA
CGCTGCAGAAagcgagaagaaaggcggtCCTATGCAGCGTGTCAAACGTA
TGATGGCCACAGATGCAACTGCGGCTACAGCCACAAGTgctggagaagag
gaggatatTCAGGACTCCTGGAGCTTCGACTCTGTCCTTAGTGGTGCCAG
ACGCTTAATAAACGGCGACCATGCAGGCATCCTCGCTGACATGAGCATGG
GAAAAGAGATGCAAGAGATCTTTGAAAACCCGGAAGTCTCCTACCAATTG
CTCCAAGTCTTTCCCATGTTCAAGGTTCTTAACGGGGTGAAAGAACTGAG
CGCCAAGCCCAAAGAATTATTCACAAAAGCTGATAGCCTTAGTGTCCTTG
AGAGTTACCGAAACTTTGTCTCAACCGCTATTAAAAATATGAAGGATATG
GCGGATCCTGTGGGGATGGCCACCACCATGCAAAAGTACTCGGATGCCAT
GAGTCCTGTCACACAAAATCCGGATGGTTCCCACAGAGCTTTGACAGAAG
AAGAGAGACGTATGACGGAGCTTGTCCGACGCGTGGAGGTACGAATCTAG back to top
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