EWM25317.1, cds5350 (CDS) Nannochloropsis gaditana

Overview
NameEWM25317.1
Unique Namecds5350
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002465.1:808512..808818 +
Alignment locationCM002465.1:808907..808983 +
Alignment locationCM002465.1:809101..809316 +

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Properties
Property NameValue
Protein idEWM25317.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100281g8.5083.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002465.1supercontigCM002465.1:808512..808818 +
CM002465.1supercontigCM002465.1:808907..808983 +
CM002465.1supercontigCM002465.1:809101..809316 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
BLAST of EWM25317.1 vs. NCBI_GenBank
Match: gi|585107073|gb|EWM25317.1| (hypothetical protein Naga_100281g8 [Nannochloropsis gaditana])

HSP 1 Score: 414.075 bits (1063), Expect = 1.933e-146
Identity = 199/199 (100.00%), Postives = 199/199 (100.00%), Query Frame = 0
Query:    1 MRFHVIALLIGAVTACHAAESEKKGGPMQRVKRMMATDATAATATSAGEEEDIQDSWSFDSVLSGARRLINGDHAGILADMSMGKEMQEIFENPEVSYQLLQVFPMFKVLNGVKELSAKPKELFTKADSLSVLESYRNFVSTAIKNMKDMADPVGMATTMQKYSDAMSPVTQNPDGSHRALTEEERRMTELVRRVEVRI 199
            MRFHVIALLIGAVTACHAAESEKKGGPMQRVKRMMATDATAATATSAGEEEDIQDSWSFDSVLSGARRLINGDHAGILADMSMGKEMQEIFENPEVSYQLLQVFPMFKVLNGVKELSAKPKELFTKADSLSVLESYRNFVSTAIKNMKDMADPVGMATTMQKYSDAMSPVTQNPDGSHRALTEEERRMTELVRRVEVRI
Sbjct:    1 MRFHVIALLIGAVTACHAAESEKKGGPMQRVKRMMATDATAATATSAGEEEDIQDSWSFDSVLSGARRLINGDHAGILADMSMGKEMQEIFENPEVSYQLLQVFPMFKVLNGVKELSAKPKELFTKADSLSVLESYRNFVSTAIKNMKDMADPVGMATTMQKYSDAMSPVTQNPDGSHRALTEEERRMTELVRRVEVRI 199          
BLAST of EWM25317.1 vs. NCBI_GenBank
Match: gi|553186442|ref|XP_005854419.1| (hypothetical protein NGA_0231800 [Nannochloropsis gaditana CCMP526] >gi|422294645|gb|EKU21945.1| hypothetical protein NGA_0231800 [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 405.601 bits (1041), Expect = 5.572e-142
Identity = 195/196 (99.49%), Postives = 196/196 (100.00%), Query Frame = 0
Query:    1 MRFHVIALLIGAVTACHAAESEKKGGPMQRVKRMMATDATAATATSAGEEEDIQDSWSFDSVLSGARRLINGDHAGILADMSMGKEMQEIFENPEVSYQLLQVFPMFKVLNGVKELSAKPKELFTKADSLSVLESYRNFVSTAIKNMKDMADPVGMATTMQKYSDAMSPVTQNPDGSHRALTEEERRMTELVRRVE 196
            MRFHVIALLIGAVTACHAAESEKKGGPMQRVKRMMATDATAAT+TSAGEEEDIQDSWSFDSVLSGARRLINGDHAGILADMSMGKEMQEIFENPEVSYQLLQVFPMFKVLNGVKELSAKPKELFTKADSLSVLESYRNFVSTAIKNMKDMADPVGMATTMQKYSDAMSPVTQNPDGSHRALTEEERRMTELVRRVE
Sbjct:    1 MRFHVIALLIGAVTACHAAESEKKGGPMQRVKRMMATDATAATSTSAGEEEDIQDSWSFDSVLSGARRLINGDHAGILADMSMGKEMQEIFENPEVSYQLLQVFPMFKVLNGVKELSAKPKELFTKADSLSVLESYRNFVSTAIKNMKDMADPVGMATTMQKYSDAMSPVTQNPDGSHRALTEEERRMTELVRRVE 196          
BLAST of EWM25317.1 vs. NCBI_GenBank
Match: gi|585099606|gb|EWM20189.1| (hypothetical protein Naga_101121g1 [Nannochloropsis gaditana])

HSP 1 Score: 72.4034 bits (176), Expect = 1.205e-11
Identity = 40/131 (30.53%), Postives = 69/131 (52.67%), Query Frame = 0
Query:   54 QDSWSFDSVLSGARRLINGDHAGILADMSMGKEMQEIFENPEVSYQLLQVFPMFKVLNGVKELSAKPKELFTKADSLSVLESYRNFVSTAIKNMKDMADPVGMATTMQKYSDAMSPVTQNPDGSHRALTEE 184
            +DSW+ +  L  ARRL++GDH  +L +M + K+++ I+  P  + +LL+  P+ K+L G   L+ K  + +T AD L +L   R F   A++   +  DP     +++K+             +HR L EE
Sbjct:  101 KDSWAEEWDLKLARRLLDGDHFSVLKEMVLSKDLEVIWSTPYAARRLLEANPILKMLPGAAALAKKDLDDWTPADGLQILSRLRLFAKDAMEKTMENIDPSKSMESLEKF-------------AHRGLREE 218          
BLAST of EWM25317.1 vs. NCBI_GenBank
Match: gi|553177025|ref|XP_005852429.1| (hypothetical protein NGA_0725900 [Nannochloropsis gaditana CCMP526] >gi|422296104|gb|EKU23403.1| hypothetical protein NGA_0725900 [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 72.0182 bits (175), Expect = 1.254e-11
Identity = 40/131 (30.53%), Postives = 69/131 (52.67%), Query Frame = 0
Query:   54 QDSWSFDSVLSGARRLINGDHAGILADMSMGKEMQEIFENPEVSYQLLQVFPMFKVLNGVKELSAKPKELFTKADSLSVLESYRNFVSTAIKNMKDMADPVGMATTMQKYSDAMSPVTQNPDGSHRALTEE 184
            +DSW+ +  L  ARRL++GDH  +L +M + K+++ I+  P  + +LL+  P+ K+L G   L+ K  + +T AD L +L   R F   A++   +  DP     +++K+             +HR L EE
Sbjct:  101 KDSWAEEWDLKLARRLLDGDHFSVLKEMVLSKDLEVIWSTPYAARRLLEANPILKMLPGAAALAKKDLDDWTPADGLQILSRLRLFAKDAMEKTMENIDPSKSMESLEKF-------------AHRGLREE 218          
The following BLAST results are available for this feature:
BLAST of EWM25317.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 4
Match NameE-valueIdentityDescription
gi|585107073|gb|EWM25317.1|1.933e-146100.00hypothetical protein Naga_100281g8 [Nannochloropsi... [more]
gi|553186442|ref|XP_005854419.1|5.572e-14299.49hypothetical protein NGA_0231800 [Nannochloropsis ... [more]
gi|585099606|gb|EWM20189.1|1.205e-1130.53hypothetical protein Naga_101121g1 [Nannochloropsi... [more]
gi|553177025|ref|XP_005852429.1|1.254e-1130.53hypothetical protein NGA_0725900 [Nannochloropsis ... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna5363rna5363Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications