EWM25317.1, cds5350 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM25317.1 vs. NCBI_GenBank
Match: gi|585107073|gb|EWM25317.1| (hypothetical protein Naga_100281g8 [Nannochloropsis gaditana]) HSP 1 Score: 414.075 bits (1063), Expect = 1.933e-146 Identity = 199/199 (100.00%), Postives = 199/199 (100.00%), Query Frame = 0
Query: 1 MRFHVIALLIGAVTACHAAESEKKGGPMQRVKRMMATDATAATATSAGEEEDIQDSWSFDSVLSGARRLINGDHAGILADMSMGKEMQEIFENPEVSYQLLQVFPMFKVLNGVKELSAKPKELFTKADSLSVLESYRNFVSTAIKNMKDMADPVGMATTMQKYSDAMSPVTQNPDGSHRALTEEERRMTELVRRVEVRI 199
MRFHVIALLIGAVTACHAAESEKKGGPMQRVKRMMATDATAATATSAGEEEDIQDSWSFDSVLSGARRLINGDHAGILADMSMGKEMQEIFENPEVSYQLLQVFPMFKVLNGVKELSAKPKELFTKADSLSVLESYRNFVSTAIKNMKDMADPVGMATTMQKYSDAMSPVTQNPDGSHRALTEEERRMTELVRRVEVRI
Sbjct: 1 MRFHVIALLIGAVTACHAAESEKKGGPMQRVKRMMATDATAATATSAGEEEDIQDSWSFDSVLSGARRLINGDHAGILADMSMGKEMQEIFENPEVSYQLLQVFPMFKVLNGVKELSAKPKELFTKADSLSVLESYRNFVSTAIKNMKDMADPVGMATTMQKYSDAMSPVTQNPDGSHRALTEEERRMTELVRRVEVRI 199
BLAST of EWM25317.1 vs. NCBI_GenBank
Match: gi|553186442|ref|XP_005854419.1| (hypothetical protein NGA_0231800 [Nannochloropsis gaditana CCMP526] >gi|422294645|gb|EKU21945.1| hypothetical protein NGA_0231800 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 405.601 bits (1041), Expect = 5.572e-142 Identity = 195/196 (99.49%), Postives = 196/196 (100.00%), Query Frame = 0
Query: 1 MRFHVIALLIGAVTACHAAESEKKGGPMQRVKRMMATDATAATATSAGEEEDIQDSWSFDSVLSGARRLINGDHAGILADMSMGKEMQEIFENPEVSYQLLQVFPMFKVLNGVKELSAKPKELFTKADSLSVLESYRNFVSTAIKNMKDMADPVGMATTMQKYSDAMSPVTQNPDGSHRALTEEERRMTELVRRVE 196
MRFHVIALLIGAVTACHAAESEKKGGPMQRVKRMMATDATAAT+TSAGEEEDIQDSWSFDSVLSGARRLINGDHAGILADMSMGKEMQEIFENPEVSYQLLQVFPMFKVLNGVKELSAKPKELFTKADSLSVLESYRNFVSTAIKNMKDMADPVGMATTMQKYSDAMSPVTQNPDGSHRALTEEERRMTELVRRVE
Sbjct: 1 MRFHVIALLIGAVTACHAAESEKKGGPMQRVKRMMATDATAATSTSAGEEEDIQDSWSFDSVLSGARRLINGDHAGILADMSMGKEMQEIFENPEVSYQLLQVFPMFKVLNGVKELSAKPKELFTKADSLSVLESYRNFVSTAIKNMKDMADPVGMATTMQKYSDAMSPVTQNPDGSHRALTEEERRMTELVRRVE 196
BLAST of EWM25317.1 vs. NCBI_GenBank
Match: gi|585099606|gb|EWM20189.1| (hypothetical protein Naga_101121g1 [Nannochloropsis gaditana]) HSP 1 Score: 72.4034 bits (176), Expect = 1.205e-11 Identity = 40/131 (30.53%), Postives = 69/131 (52.67%), Query Frame = 0
Query: 54 QDSWSFDSVLSGARRLINGDHAGILADMSMGKEMQEIFENPEVSYQLLQVFPMFKVLNGVKELSAKPKELFTKADSLSVLESYRNFVSTAIKNMKDMADPVGMATTMQKYSDAMSPVTQNPDGSHRALTEE 184
+DSW+ + L ARRL++GDH +L +M + K+++ I+ P + +LL+ P+ K+L G L+ K + +T AD L +L R F A++ + DP +++K+ +HR L EE
Sbjct: 101 KDSWAEEWDLKLARRLLDGDHFSVLKEMVLSKDLEVIWSTPYAARRLLEANPILKMLPGAAALAKKDLDDWTPADGLQILSRLRLFAKDAMEKTMENIDPSKSMESLEKF-------------AHRGLREE 218
BLAST of EWM25317.1 vs. NCBI_GenBank
Match: gi|553177025|ref|XP_005852429.1| (hypothetical protein NGA_0725900 [Nannochloropsis gaditana CCMP526] >gi|422296104|gb|EKU23403.1| hypothetical protein NGA_0725900 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 72.0182 bits (175), Expect = 1.254e-11 Identity = 40/131 (30.53%), Postives = 69/131 (52.67%), Query Frame = 0
Query: 54 QDSWSFDSVLSGARRLINGDHAGILADMSMGKEMQEIFENPEVSYQLLQVFPMFKVLNGVKELSAKPKELFTKADSLSVLESYRNFVSTAIKNMKDMADPVGMATTMQKYSDAMSPVTQNPDGSHRALTEE 184
+DSW+ + L ARRL++GDH +L +M + K+++ I+ P + +LL+ P+ K+L G L+ K + +T AD L +L R F A++ + DP +++K+ +HR L EE
Sbjct: 101 KDSWAEEWDLKLARRLLDGDHFSVLKEMVLSKDLEVIWSTPYAARRLLEANPILKMLPGAAALAKKDLDDWTPADGLQILSRLRLFAKDAMEKTMENIDPSKSMESLEKF-------------AHRGLREE 218 The following BLAST results are available for this feature:
BLAST of EWM25317.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 4
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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