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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100196g6.3054.mrna |
| Orig protein id | gnl|cribi|Naga_100196g6.3054 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002465.1 | supercontig | CM002465.1:777531..777781 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna5350 ID=rna5350|Name=rna5350|organism=Nannochloropsis gaditana|type=mRNA|length=1566bp
ATGTACTGTCGCCCGCTACGGTACATTTTAAGCCAGCATGCATTTGCCAT
ACAGTCACAGAGGGGGCTGCGTAGGCTGAATTTATCAGCCGCAGGGATGC
AACATGGTCACCGGGGCTCGAGGCCTGGGTGTGGACGCCGATTGCTTAGT
CTACAACCTACACCGAACCCGCCTCAGTCACGCTCCACCGCCGAAGCTGT
ACCCGCCGATGACCCCGGCTCCATAGAGCTCTCAAGCACCGTGCCTTCGG
AGCATGAGGGAGAGGGATTTGATGGCACGGCGTCGCAACGGACAGCATCG
TCGGCTGCACCGCCGCAGTCTTGCGTCCTCCCTCCAACAGAGGCTTCTCA
CGGTGACTTTCCCGGCGCACCGCCCGAGGGGATTCCTTTCACCTCCTCGC
TTCACGTGGTTGCCCCCGAAGAGCATGTAGTCTGGCCTGTCTACCGGGTG
CTCGAGACGGACGGCCGTGTGCGTTCCGGGGCTCTCGTTCCCGACCTTGA
CCAAGCTGTTGTCCGCCGCATGTACCACACGATGGTACGGCTGCAAGCCA
TGGACACCATTTTCTACAACGCGCAGCGGCAAGGTCGGATTTCCTTCTAC
ATCACCTGTACGGGGGAGGAAGCCACACACGTGGGCAGTGCCGCCGCCCT
CCGGCCTGAGGACCCGGTCTTGGCCCAGTACCGGGAGGGCGGGGTCTTGA
TGTGGCGCGGGTTCACCCTCGATCAGTTTGCGGACCAATGCTTCTCCAAC
CGGGACGACCTGGGGAAAGGCCGGCAGATGCCCATCCACTACGGCACGGC
CGCCTTGCACTTCCAGACCATTTCTTCCCCCCTCGCCACCCAGATCCCCC
ACGCGGTGGGGGCGGCCTACGGGATCAAGCTCGAGGACGCTTCCAAGTCG
GCGGAAGACAAACGCTGTGTCATCTGTTTCTTCGGGGAAGGGGCCGCGAG
CGAGGGCGACTTCCACGCGGCCCTCAATTTCGCCGCCACCTTGCAAGCCC
CCGTGTTGTTCTTCTGTCGCAACAACGGGTACGCCATCAGCACGCCCGTC
AAGGAGCAATTTCGTGGGGATGGTGTCGTCTCCCGCGCCCCCGGCTATGG
CATGCATGCCCTGAGGGTGGACGGGAACGACGTCTTGGCCGTGTATCATG
CCTGTCAGGCGGCTCGGGAGGTGTGCGTCCGGGAGGGAAAGCCCGTGCTG
GTGGAGGCCATAACCTATCGCGTGGGGCACCACTCGACCTCGGACGACTC
CACGCGCTACCGGTCCTTGTCGGAAATTAAACAGTGGCACGGACAGGAGG
ATCCCCTCCGCCGGTTTCGGGCCTGGATGGAGGGGAAAGGTTGGTGGTCG
GACGAAGACGAGGTCCAACTGCGAGACGAGGAGCGGATGGCGGTGCTACG
GGCTCTTGAGCGTGCGGAAGTGAAGCCAAAACCGGGAATGGAGGCTTTGT
TCGAAGATGTGTACCGGGAGAAGCCCTGGCATTTGCGCGAACAGGAGGCG
GGACTGCGGGATCACGTTGAAAAGTACCCGGATGTGTACAAAGAGGGCAC
GGGGAAGGGGCACTGA back to topprotein sequence of rna5350 >rna5350-protein ID=rna5350-protein|Name=rna5350|organism=Nannochloropsis gaditana|type=polypeptide|length=67bp
MGRDGWRDNAEKCSMGLYQRLGWTQWEEGEYFECGMDASLGGIGASIGGM
YHVHNQLVDSSIAQPCP back to topmRNA from alignment at CM002465.1:777531..777781+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna5350 ID=rna5350|Name=rna5350|organism=Nannochloropsis gaditana|type=mRNA|length=251bp|location=Sequence derived from alignment at CM002465.1:777531..777781+ (Nannochloropsis gaditana)
atgggacGGGACGGATGGAGGGACAATGCCGAGAAATGTAGCATGGGGCT
GTATCAACGCTTGGGTTGGACacagtgggaggagggagaataTTTCGAAT
GCGGTATGGATGCAAGGTGTGGCGAAGGAGCGTTAAGAGGCAATAGCTGT
cagagagggaaagcctCGGAGGGATTGGAGCCAGTATAGGTGGAATGTAT
CATGTGCATAATCAGCTTGTCGATAGTAGCATAGCGCAACCCTGTCCATA
G back to topCoding sequence (CDS) from alignment at CM002465.1:777531..777781+ >rna5350 ID=rna5350|Name=rna5350|organism=Nannochloropsis gaditana|type=CDS|length=408bp|location=Sequence derived from alignment at CM002465.1:777531..777781+ (Nannochloropsis gaditana)
atgggacGGGACGGATGGAGGGACAATGCCGAGAAATGTAGCATGGGGCT
GTATCAACGCTTGGGTTGGACacagtgggaggagggagaataTTTCGAAT
GCGGTATGGATGCAAGcctCGGAGGGATTGGAGCCAGTATAGGTGGAATG
TATCATGTGCATAATCAGCTTGTCGATAGTAGCATAGCGCAACCCTGTCC
ATAGatgggacGGGACGGATGGAGGGACAATGCCGAGAAATGTAGCATGG
GGCTGTATCAACGCTTGGGTTGGACacagtgggaggagggagaataTTTC
GAATGCGGTATGGATGCAAGcctCGGAGGGATTGGAGCCAGTATAGGTGG
AATGTATCATGTGCATAATCAGCTTGTCGATAGTAGCATAGCGCAACCCT
GTCCATAG back to top
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