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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100196g4.3057.mrna |
| Orig protein id | gnl|cribi|Naga_100196g4.3057 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002465.1 | supercontig | CM002465.1:773643..775713 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna5348 ID=rna5348|Name=rna5348|organism=Nannochloropsis gaditana|type=mRNA|length=1155bp
CATAATTGCAGTCAACGGTCAGAGTGTTTGGTCCATGCCGTAGGTTGATG
TCTATATTCATGGCTGTGTCCACGGCATGCATGCGTAGGACTCAGTGTCA
GCATTGTGAGCTGCGACAGGTCGTTCACTCCCGTGTTGCATCAAGCGACG
CTTTATCCTCCTACTACTAGTAGGATTCTAACAACTCTTCTATCTGCCAC
ACACACGCTCGGACACACGTCCCTTAGTCCCTCCTTCACTCATCATGAAG
ACGACGGATCTCCTTGCAGCCATCCAGCTCTACGTGGATATACTGGCAGA
CCGGTGGCCCGGATTAGTCTTGTCTACGGTAGCCTGGTCAGTAGTGTTCG
GCCTCGTCTGTGTCCTGCCGGCCATCTCGGGCACAAGCTTCGACTTTCGA
AACCGGACCGTCTCCATCCTCCACGCCTTTCTTTCTGCTTACCTGACCCT
GGTCCTGGTTCTGCTGGAGACTCCTTGCGAAATCGGGGGCCCGAACACCC
GCAATCAGATCATTGTCCTGAACGTCAGCACGGGCTATTTCATCTACGAC
TACGTGGCCTGCACATTAAACGACGTCCGGAAGCGGCATTTCGATACCAT
GAACTTTTTCCACCACCTGGCTTCCCTGGCCGGCCTTTTGACGGGGCTCA
TAAACGAACGTTCCGGTGCCGAGCTCGGCATGTGCCTGTTCTTGATGGAG
GTCTCCAACCCTTTCATGCACACCATCCACCTCTTCCGAGAGCTCGGTTA
CAATGACGCCCCTGTGGCCGAGGCGAACAAAGCCCTCTTCGCCATCATTT
TTACTCTGGCCCGTGTTGTCGGCGGCCCTTTCCTGACCTACTATACCTTG
GTCAGTCCACGTACCCACTGGGTGATCAAAGCCGGCGCCCTCGGCATCCT
TGCCGTCTCCTTCCTATGGTTTTCCAAGATTGTGGCCATGCTGAGCAAGG
CCTTCGGAGGGAGCGAGGGAAAGGATAAGGGGGGAGAGAAAAAAAAGGGT
AGATAGCAAAGCGGAGGGCTTCTCACCCCTCAGTAGGGCGGCCGCGTGGC
GCGCATAAGAATGCGCTCTCACACGCCCTTGAGCAGTAAATTAAAAACAC
TTTACGGAGCCCTAGCATCACACTTTTCCATTTCCTTGCAAGCAAAGCGA
CAGCG back to topprotein sequence of rna5348 >rna5348-protein ID=rna5348-protein|Name=rna5348|organism=Nannochloropsis gaditana|type=polypeptide|length=362bp
MYLGSVGGAVLGVHFFNKEGNFGACIRALGKLVLYACDRLAYAWSELKFN
WKAWRVYERSFKKLESLDKEMQVSKKIKAWDQQYQVSTNLNGWWRKFQTS
AKGLEESLKEQAVYWQRTQRLRDEQRQAQMIHQEIQRQQERERARQNGGG
VSGGAFQSTSVETEAPASLRPESEQGEGARGQGRGEGVPLTAQGPRLGAG
GGWSAPRAQASALTPASGPQPASHPSHPGASPPSHFSSTSSRQGLDTPGA
VGGPGGRPPPPSSPGLAFEFNRFVKSLGGATSGISRSSNPAASPVPSPSS
PASPPSLTVNSIEGLEGQARSMDAGAPPPHVDEREPFNLSSPSLGSGDVE
KKGWEGGSEVNM back to topmRNA from alignment at CM002465.1:773643..775713- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna5348 ID=rna5348|Name=rna5348|organism=Nannochloropsis gaditana|type=mRNA|length=2071bp|location=Sequence derived from alignment at CM002465.1:773643..775713- (Nannochloropsis gaditana)
TACCCCCCTCCCTTCGGCGATTTCAAGTTCATGTCACCAAACCGACACAC
AGTGGCAAGTCGAACGGGGCACTCGATCCTTGCCTCCGCCGAGGATTGCC
AGGCCTTGCACACGCCTGGGGCTTCGTAAATTCGAAGCGTCTCGTTTCTC
GTGTGGAAGCACGCATGCCCGTCAGTGCACGCAGAGCCGCCCTCCACTTG
TTAAAGCAACGAGACTATGAGTTCATCCACTTAGCTAGCAATCAACTCCC
TTCTGCTCGATCCATTCCCTTCCGCATTCTTAGGCCATGCACGTGGGGAG
CCTTTTGGCATGGCTGACGCTCTTGTGCTGCTGTTATAGTTGTCGCCTGG
CTTATGTGACATCCCCCCTTGCCCCAGGACGGGGCCACGGGCAGCGGACG
GTGACTATTACCCCGCAACGGCCCGTACCTCTTCTATTGCAACCGCTGAC
AAACTATCCTTGCGCCACGCTTTCTGCCCGTCGTTCCTCTTTACCCGTAT
TTTCATCCTTTTCGTCCTTCTTTGCCGAGCGGGCTGGAGTGAACGCGACG
ACCAGCGGGGATAACTTGGCATATGAACTGCGCCTTCTGGAGCTGGAGAG
TCGGCTCTTGAAATTGGAGGGAATCACGGGGCGGACGGCTAGCTCAGGCG
GTGGTGGGGCAAGCGGGGGAAAAAAACGGGGGGGAACGTGCAAGGTGCAA
CGGGCACCGGTAGCAGCGCTTTCAACCACATTCTTCCAGACGGGGAGCAG
CTGTTGTTGGGCTGCACGTTCGCCGGGGCCGTGCTCGGCTTATTCGTGGG
CCGCGCCTTATTTAACCGACAAATGTACCTGGGCAGTGTAGGGGGTGCTG
TTTTGGGCGTGCATTTTTTCAACAAGGAAGGGAACTTCGGGGCCTGTATC
CGGGCCCTGGGGAAGCTGGTGCTCTACGCCTGCGACCGGTTGGCCTACGC
CTGGTCCGAGCTCAAGTTCAATTGGAAGGCCTGGAGGGTGTACGAGCGGA
GCTTCAAGAAGCTGGAGAGCCTGGACAAGGAGATGCAGGTGTCGAAGAAG
ATCAAGGCGTGGGACCAGCAGTACCAGGTGTCCACCAACCTGAACGGGTG
GTGGCGGAAGTTCCAAACCTCGGCCAAGGGCCTGGAGGAGAGCTTGAAGG
AGCAGGCGGTCTACTGGCAGCGCACCCAGCGGCTCAGGGACGAGCAGCGG
CAAGCGCAGATGATCCACCAGGAGATTCAGCGGCAGCAGGAGAGGGAACG
GGCCCGGCAAAACGGGGGGGGGGTAAGCGGAGGGGCCTTTCAATCCACCA
GCGTCGAGACCGAGGCCCCGGCGTCGCTTCGACCCGAGTCGGAGCAAGGC
GAAGGAGCGCGGGGCCAAGGTCGAGGGGAGGGCGTGCCTCTGACCGCGCA
GGGTCCAAGGCTCGGAGCCGGGGGCGGGTGGTCCGCCCCTCGCGCACAGG
CCTCCGCCCTTACCCCTGCCAGTGGCCCCCAGCCGGCCTCCCACCCCTCT
CATCCCGGCGCCTCCCCACCTTCCCATTTCTCTTCCACCTCGTCTCGCCA
GGGCCTCGACACGCCGGGGGCAGTGGGAGGTCCGGGCGGGCGCCCTCCCC
CTCCTTCCTCCCCGGGCCTCGCCTTTGAGTTCAACCGTTTCGTCAAGAGC
CTCGGTGGAGCCACGAGCGGCATCTCTCGCTCCTCCAATCCCGCGGCCTC
TCCCGTACCTTCGCCTTCCTCCCCCGCCTCCCCTCCTTCCCTCACTGTAA
ATAGCATCGAGGGACTCGAGGGCCAGGCGCGGTCCATGGATGCTGGTGCC
CCGCCGCCCCACGTGGACGAGCGTGAGCCGTTCAATCTGTCCTCCCCCTC
TTTGGGAAGTGGCGATGTGGAAAAGAAAGGTTGGGAGGGCGGGAGCGAAG
TAAACATGTAAAGGAGGGGGGTCTCGGCAAGGGGGGCGGCGTCCTCAGAG
GGCCGGGCTAGGAGGGAGGAGAGACCCGAGGGCGCTGTCGCTTTGCTTGC
AAGGAAATGGAAAAGTGTGATGCTAGGGCTCCGTAAAGTGTTTTTAATTT
ACTGCTCAAGGGCGTGTGAGA back to topCoding sequence (CDS) from alignment at CM002465.1:773643..775713- >rna5348 ID=rna5348|Name=rna5348|organism=Nannochloropsis gaditana|type=CDS|length=1089bp|location=Sequence derived from alignment at CM002465.1:773643..775713- (Nannochloropsis gaditana)
ATGTACCTGGGCAGTGTAGGGGGTGCTGTTTTGGGCGTGCATTTTTTCAA
CAAGGAAGGGAACTTCGGGGCCTGTATCCGGGCCCTGGGGAAGCTGGTGC
TCTACGCCTGCGACCGGTTGGCCTACGCCTGGTCCGAGCTCAAGTTCAAT
TGGAAGGCCTGGAGGGTGTACGAGCGGAGCTTCAAGAAGCTGGAGAGCCT
GGACAAGGAGATGCAGGTGTCGAAGAAGATCAAGGCGTGGGACCAGCAGT
ACCAGGTGTCCACCAACCTGAACGGGTGGTGGCGGAAGTTCCAAACCTCG
GCCAAGGGCCTGGAGGAGAGCTTGAAGGAGCAGGCGGTCTACTGGCAGCG
CACCCAGCGGCTCAGGGACGAGCAGCGGCAAGCGCAGATGATCCACCAGG
AGATTCAGCGGCAGCAGGAGAGGGAACGGGCCCGGCAAAACGGGGGGGGG
GTAAGCGGAGGGGCCTTTCAATCCACCAGCGTCGAGACCGAGGCCCCGGC
GTCGCTTCGACCCGAGTCGGAGCAAGGCGAAGGAGCGCGGGGCCAAGGTC
GAGGGGAGGGCGTGCCTCTGACCGCGCAGGGTCCAAGGCTCGGAGCCGGG
GGCGGGTGGTCCGCCCCTCGCGCACAGGCCTCCGCCCTTACCCCTGCCAG
TGGCCCCCAGCCGGCCTCCCACCCCTCTCATCCCGGCGCCTCCCCACCTT
CCCATTTCTCTTCCACCTCGTCTCGCCAGGGCCTCGACACGCCGGGGGCA
GTGGGAGGTCCGGGCGGGCGCCCTCCCCCTCCTTCCTCCCCGGGCCTCGC
CTTTGAGTTCAACCGTTTCGTCAAGAGCCTCGGTGGAGCCACGAGCGGCA
TCTCTCGCTCCTCCAATCCCGCGGCCTCTCCCGTACCTTCGCCTTCCTCC
CCCGCCTCCCCTCCTTCCCTCACTGTAAATAGCATCGAGGGACTCGAGGG
CCAGGCGCGGTCCATGGATGCTGGTGCCCCGCCGCCCCACGTGGACGAGC
GTGAGCCGTTCAATCTGTCCTCCCCCTCTTTGGGAAGTGGCGATGTGGAA
AAGAAAGGTTGGGAGGGCGGGAGCGAAGTAAACATGTAA back to top
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