EWM25333.1, cds5335 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM25333.1 vs. NCBI_GenBank
Match: gi|585107092|gb|EWM25333.1| (hypothetical protein Naga_100196g4 [Nannochloropsis gaditana]) HSP 1 Score: 728.013 bits (1878), Expect = 0.000e+0 Identity = 362/362 (100.00%), Postives = 362/362 (100.00%), Query Frame = 0 Query: 1 MYLGSVGGAVLGVHFFNKEGNFGACIRALGKLVLYACDRLAYAWSELKFNWKAWRVYERSFKKLESLDKEMQVSKKIKAWDQQYQVSTNLNGWWRKFQTSAKGLEESLKEQAVYWQRTQRLRDEQRQAQMIHQEIQRQQERERARQNGGGVSGGAFQSTSVETEAPASLRPESEQGEGARGQGRGEGVPLTAQGPRLGAGGGWSAPRAQASALTPASGPQPASHPSHPGASPPSHFSSTSSRQGLDTPGAVGGPGGRPPPPSSPGLAFEFNRFVKSLGGATSGISRSSNPAASPVPSPSSPASPPSLTVNSIEGLEGQARSMDAGAPPPHVDEREPFNLSSPSLGSGDVEKKGWEGGSEVNM 362 MYLGSVGGAVLGVHFFNKEGNFGACIRALGKLVLYACDRLAYAWSELKFNWKAWRVYERSFKKLESLDKEMQVSKKIKAWDQQYQVSTNLNGWWRKFQTSAKGLEESLKEQAVYWQRTQRLRDEQRQAQMIHQEIQRQQERERARQNGGGVSGGAFQSTSVETEAPASLRPESEQGEGARGQGRGEGVPLTAQGPRLGAGGGWSAPRAQASALTPASGPQPASHPSHPGASPPSHFSSTSSRQGLDTPGAVGGPGGRPPPPSSPGLAFEFNRFVKSLGGATSGISRSSNPAASPVPSPSSPASPPSLTVNSIEGLEGQARSMDAGAPPPHVDEREPFNLSSPSLGSGDVEKKGWEGGSEVNM Sbjct: 1 MYLGSVGGAVLGVHFFNKEGNFGACIRALGKLVLYACDRLAYAWSELKFNWKAWRVYERSFKKLESLDKEMQVSKKIKAWDQQYQVSTNLNGWWRKFQTSAKGLEESLKEQAVYWQRTQRLRDEQRQAQMIHQEIQRQQERERARQNGGGVSGGAFQSTSVETEAPASLRPESEQGEGARGQGRGEGVPLTAQGPRLGAGGGWSAPRAQASALTPASGPQPASHPSHPGASPPSHFSSTSSRQGLDTPGAVGGPGGRPPPPSSPGLAFEFNRFVKSLGGATSGISRSSNPAASPVPSPSSPASPPSLTVNSIEGLEGQARSMDAGAPPPHVDEREPFNLSSPSLGSGDVEKKGWEGGSEVNM 362
BLAST of EWM25333.1 vs. NCBI_GenBank
Match: gi|553182736|ref|XP_005853777.1| (hypothetical protein NGA_0438200 [Nannochloropsis gaditana CCMP526] >gi|422295288|gb|EKU22587.1| hypothetical protein NGA_0438200 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 710.294 bits (1832), Expect = 0.000e+0 Identity = 357/362 (98.62%), Postives = 357/362 (98.62%), Query Frame = 0 Query: 1 MYLGSVGGAVLGVHFFNKEGNFGACIRALGKLVLYACDRLAYAWSELKFNWKAWRVYERSFKKLESLDKEMQVSKKIKAWDQQYQVSTNLNGWWRKFQTSAKGLEESLKEQAVYWQRTQRLRDEQRQAQMIHQEIQRQQERERARQNGGGVSGGAFQSTSVETEAPASLRPESEQGEGARGQGRGEGVPLTAQGPRLGAGGGWSAPRAQASALTPASGPQPASHPSHPGASPPSHFSSTSSRQGLDTPGAVGGPGGRPPPPSSPGLAFEFNRFVKSLGGATSGISRSSNPAASPVPSPSSPASPPSLTVNSIEGLEGQARSMDAGAPPPHVDEREPFNLSSPSLGSGDVEKKGWEGGSEVNM 362 MYLGSVGGAVLGVHFFNKEGNFGACIRALGKLVLYACDRLAYAWSELKFNWKAWRVYERSFKKLESLDKEMQVSKKIKAWDQQYQVSTNLNGWWRKFQTSAKGLEESLKEQAVYWQRTQRLRDEQRQAQMIHQEIQRQQERERARQNGGGVSGGAFQSTSVETEAPASLRPESEQGEGARGQGRGE PLTAQGPR GAGGGWSAPRAQASALTPASGPQPASHPSHPGASPPSHFSS SSRQGLDTPGAVGGPGGRPPPPSSPGLAFEFNRFVKSLGGATSGISRSSNPAASPVPSPSSPASPPSLTVNSIEGLEGQARSMDAGAPPPHVDEREPFNLSSPSLGSG VEKKGWEGGSEVNM Sbjct: 1 MYLGSVGGAVLGVHFFNKEGNFGACIRALGKLVLYACDRLAYAWSELKFNWKAWRVYERSFKKLESLDKEMQVSKKIKAWDQQYQVSTNLNGWWRKFQTSAKGLEESLKEQAVYWQRTQRLRDEQRQAQMIHQEIQRQQERERARQNGGGVSGGAFQSTSVETEAPASLRPESEQGEGARGQGRGE--PLTAQGPRPGAGGGWSAPRAQASALTPASGPQPASHPSHPGASPPSHFSSISSRQGLDTPGAVGGPGGRPPPPSSPGLAFEFNRFVKSLGGATSGISRSSNPAASPVPSPSSPASPPSLTVNSIEGLEGQARSMDAGAPPPHVDEREPFNLSSPSLGSGGVEKKGWEGGSEVNM 360
BLAST of EWM25333.1 vs. NCBI_GenBank
Match: gi|553187346|ref|XP_005854591.1| (hypothetical protein NGA_0176000 [Nannochloropsis gaditana CCMP526] >gi|422294472|gb|EKU21772.1| hypothetical protein NGA_0176000 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 352.058 bits (902), Expect = 1.623e-119 Identity = 166/171 (97.08%), Postives = 166/171 (97.08%), Query Frame = 0 Query: 1 MYLGSVGGAVLGVHFFNKEGNFGACIRALGKLVLYACDRLAYAWSELKFNWKAWRVYERSFKKLESLDKEMQVSKKIKAWDQQYQVSTNLNGWWRKFQTSAKGLEESLKEQAVYWQRTQRLRDEQRQAQMIHQEIQRQQERERARQNGGGVSGGAFQSTSVETEAPASLRP 171 MYLGSVGGAVLGVHFFNKEGNFGACIRALGKLVLYACDRLAYAWSELKFNWKAWRVYERSFKKLESLDKEMQVSKKIKAWDQQYQVSTNLNGWWRKFQTSAKGLEESLKEQAVYWQRTQRLRDEQRQAQMIHQEIQRQQERERARQNGGGVSGGAFQSTSVETEA P Sbjct: 1 MYLGSVGGAVLGVHFFNKEGNFGACIRALGKLVLYACDRLAYAWSELKFNWKAWRVYERSFKKLESLDKEMQVSKKIKAWDQQYQVSTNLNGWWRKFQTSAKGLEESLKEQAVYWQRTQRLRDEQRQAQMIHQEIQRQQERERARQNGGGVSGGAFQSTSVETEARRRFDP 171
BLAST of EWM25333.1 vs. NCBI_GenBank
Match: gi|873234174|emb|CEM02231.1| (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 81.2629 bits (199), Expect = 1.562e-13 Identity = 34/96 (35.42%), Postives = 62/96 (64.58%), Query Frame = 0 Query: 2 YLGSVGGAVLGVHFFNKEGNFGACIRALGKLVLYACDRLAYAWSELKFNWKAWRVYERSFKKLESLDKEMQVSKKIKAWDQQYQVSTNLNGWWRKF 97 +LG+ G V ++ ++K G +RA G+L + A + Y +LK ++AW+VYER+FK+ E LDK+ ++ K++A+D+++Q+S N+ W+K Sbjct: 112 WLGAAIGLVWAINNYDKPGRVSRWVRATGRLFVLAFYQWRYLVEDLKMKFRAWKVYERAFKRFEDLDKQHKMLDKLQAFDERHQISQNVQTTWKKL 207 The following BLAST results are available for this feature:
BLAST of EWM25333.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 4
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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