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Properties
| Property Name | Value |
|---|
| Product | ribokinase |
| Orig transcript id | gnl|cribi|Naga_100005g128.6685.mrna |
| Orig protein id | gnl|cribi|Naga_100005g128.6685 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002465.1 | supercontig | CM002465.1:730332..732019 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna5329 ID=rna5329|Name=rna5329|organism=Nannochloropsis gaditana|type=mRNA|length=2090bp
ACGTGAGAACCTCGACATGGAAGGGCTCCCGGAGCCGGCGATGAGGAGGT
CGCACTCTACCTGGTTCTGGGAATTTGTCGTGCAAATAGCAAAACAAATC
CACATTTAAGCTGCCCACGCAAACTATACTCTTCTGAATTTTGCTATCCA
TGGTAAATCTGGCGTGTGCCTGCTAGAGAGGTTTCAAGTCAGTGTGTGAA
GATGCTCGCTGCCTTGCGTCAGGAGGTTGCACTAGCACTTCCTCGACGAT
ATCATCCCCCACCCCTTTCTTTTTGGACGTCTCGAATGCAGACAAAGCAA
ATGCGGCTCAAAATATTTAATATTACAACATCACTCATATCCGAACGCTA
CTCTTTGTCCCTTGCAGCAAGCGCACACATATCTGGGACTGGGGTTTCCT
TCCCCCTGGTTAAATCTACCATCGTATCATCGCCGCCTCCGGGGACCACA
AAAAGGGGCGGGTGCACGATGGCAGCAAGCACTTCATCCGCGTCCGGTGA
AGAGGAGGATGTGTTTGAGATCAGAGAGTGGGTGGATGACGAAGGGAAAG
AGGTTTCTTCCGAGGTGTACAGTGTTCGTGAAGCTGCCAGACAGGTGAAG
AAGCTTGACTTGTTGGGTGTTTTGGAAAAGGCAGCCGCGGCGAACAAGAA
AGCGTCTACGGCCGCAGCAATTGCAACAGAAGTAAAGGAGGCGGAGCGAG
CTGCTTTTGGCAATAATCAGACGCCAACATCAAATCGGGATGTCAATAAT
CGCGTCGCTGCAGACTCTGAAAGCAGCAACGCGTCTTCAAATGGCTGCAA
AACGGGGGCATCTTTACCTTCTTCGACACAACAGCTTCTGGACGACCAAG
ATTGGGAAGGTATCAAGGAAAGGGCGAGCGAGATACAATCGCAACAGTTC
AAGTCGATTCGCGGGGAGCTGGAGGCGGAGGCGGACAGTCGACAGGGTCG
AAACAAGTTGGAGGGTTCGGGGTGGGGAAAGGGCTTCTTCCTGAGCACGG
GACGGGAGCGCATTGGCGGCAACAGTTCTGGCACCGAGTCAACGACCAAG
CCCACGAAGAGCTGCATAAAGAGCCCAGTAACAAAGACGGCGCGAGTGAA
AAAACACGTGAGCTTCGACCTCCACTCGGCGCCGGCTTCCCGGGAGTCGC
TAGATTTCCTCCCGCGTCGCCGGATCCCGTGCGAGCCCGAGGTGGAAGAG
GAAAAAGACGAGGACAAACGTTTGGAGGCTCAGCGGCGACAAGCATGGAG
TGGCACTGGTTTTCAGGGAAAGCTCCCGGAGACCTCGGAGACGAAGCCTG
CGGGGAAGGCCTTCAGTGGATTGGTCACGGAGGTGGACGGGTGCGGGGGG
CCGCGGAATGGGGGAGGGGAAAGGATAGGCCCGGAGCTTACTTCTCGGCG
TAGCTCTTCGGCCTGCAGTATGACAGATCGGTCGGGGATAGCGCCCCCCG
GCATGTCGAGGTTTAAGGCCAGGGCGTTAGGTGTGGAGTGGGACGGAGGG
AGCGCGTGAGGCGCCAGGGTTCCCCGACGCGGACCCGTGCTGGCCCGGAG
ATATGTACAAAGAAAAGAAGGCGGCGGGCACACAGGTGGGGGAGAACTTG
CTTGTTATGTATGCATGAGGAAAGTCGGACGAAAGAGCACGTTGTGCAAG
GTGTCTCGAGCGCCTGCAGTCCACGGCAATACCGAGGCGCAGCGTTAATC
GTTCATTCCTCTTGATTCTTGTCCTGGTCCAGTAATTACATCTCACATTT
TATGCGCACTATCCCAAGAATCATGTCATCCCATCACCCGTTCATTCTTC
CCCCCCGTCCCCCCCCTCATCGCCTGCCCCTGTGCCGTACCACGCCCTTC
GAATCGAGTCCCAGAAGCTCAAACCCATGATCGCCTGCGGGGCCATGCGG
AAATATGCAGCCCCTGCGCCCTTGTACATCCCGTGCAAGAAGCCTTCGGT
CTGGATGACCTTCCGAAAGCAATCCCAGAAGCCGCGGTAGTACAGGCCTC
GGCCCCGCGCGTCGGTGGGCTGATTGTACAGGCGGGTCCGCACCACGTCC
AGAGGCTCCATGAAGATGATAATATTGACACTCGAAAGCA back to topprotein sequence of rna5329 >rna5329-protein ID=rna5329-protein|Name=rna5329|organism=Nannochloropsis gaditana|type=polypeptide|length=322bp
MDSKIQKSIVCVGSLNVDLFCYLHDKFPEPGRTLQGSHSATCCGGKGGNQ
AVMAARLGAPTSMVGMVGRDVFGNTLREALIHDGVSIKPLREAADGTSTG
TAQILVNGRGENMIIITAGANGKLTPTDVQAAESDIAAAAVVMVQLEVPL
EATREALRLARAHEVFSILNPAPAPRGGLDQELLSLASLVCPNETELAVL
TQKPAKTLSEIEAAAHRLRGMGAARVLVTLGERGTLLVTEKDGEDHVLLT
PSPKVEMVVDTSGAGDCFIGSLAAYLSSGMALPQAVSNACELASISVGKA
GTQISYPYKHELPERLQLLHGL back to topmRNA from alignment at CM002465.1:730332..732019+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna5329 ID=rna5329|Name=rna5329|organism=Nannochloropsis gaditana|type=mRNA|length=1688bp|location=Sequence derived from alignment at CM002465.1:730332..732019+ (Nannochloropsis gaditana)
ATGGATAGCAAAATTCAGAAGAGTATAGTTTGCGTGGGCAGCTTAAATGT
GGATTTGTTTTGCTATTTGCACGACAAATTCCCAGAACCAGGTAGAGTGC
GACCTCCTCATCGCCGGCTCCGGGAGCCCTTCCATGTCGAGGTTCTCACG
TCGTGCTACCCACGCATAGGCGAGACTCTCCAAGGCTCCCACTCTGCTAC
ATGCTGTGGGGGTAAAGGAGGCAATCAAGCGGTCATGGCTGCACGTCTCG
GTGCACCGACGTCCATGGTGGGCATGGTGGGCAGGGACGTTTTTGGGAAC
ACGTTGCGGGAGGCTTTGATTCACGACGGTGTTAGCATCAAGTAAGGCGG
GGTCTATGGACTTGAAGCATTTGTATATGCTATCTAACAATAATCACACG
TCAAAACTGCTACCTTTAAATCGGAATTTGGGAAATTAGACCTCTCAGAG
AAGCAGCCGACGGGACTAGCACGGGCACGGCGCAAATACTGGTCAACGGG
CGAGGGGAGAATATGATCATCATCACCGCTGGTGCCAATGGAAAGCTGAC
GCCCACCGACGTGCAAGCTGCAGAGAGTGATatcgcagcagcagctgttG
TAATGGTAGGTGCGCGTGGTCTGTAATATACTTTTTCATTCCGGCCCATA
TGGCTCCTAGTGGATGGGCATAGGCACGCTCGATCCTGCCAGTAATGCAG
CGCAAGTCCTAGAAAGCAATAGCTACGAGGCGAACAATCAGGTCGTATGG
GTCTCTTCCCGCGCCAACGTGCCTGAACGGGGCAGCGGCCAGCGGCTCCT
CGCATTGACGCGTGTCACCAACCCCACGCACAGGTTCAGCTCGAAGTGCC
CCTGGAAGCGACCCGAGAAGCCCTCCGTCTCGCCCGGGCCCACGAGGTCT
TCAGCATTCTTAACCCCGCACCGgccccccggggggggctTGACCAGGTA
GGTCGGCCTCGAAAGGCGCGTTCAACGGCGCACCAATGCAAGGGAGCCGG
TAGGGCACGTGACACTCCGAGGGCCctagaggggggggggtcacaatcct
ccgtctcccccatCACTCTCTTTGGTGATGTCGGTTCCAGTTGAGCAGCC
AGTGTTCAAAGACATGCCGTCCTTCGGTCACGGGACTCCCCAACCCCCAT
CCATCTCCGCATCAGgagctcctctccttggcctcgcTAGTTTGCCCAAA
TGAGACGGAGCTCGCCGTGCTCACCCAGAAGCCTGCCAAAACTCTGTCGG
AGATAGAAGCGGCCGCGCATCGTCTCCGGGGCATGGGTGCAGCCAGGGTG
CTCGTGACGctcggggagagaggcacCCTGTTGGTGACAGAAAAGGACGG
CGAGGACCACGTGTTGCTGACTCCGAGCCCGAAGGTAGAAATGGTGGTGG
ATACAAGTGGGGCGGGAGACTGTTTCATCGGCAGCCTGGCGGCCTATCTG
TCAAGCGGGGTAAGTGAAGGGAGGACCGCTTCTTCTGGGTCGGACTTGGG
GAAAGACCGCGACGTGAAACACAGCAAACTTCTTACCCTTGTGGCCGCCA
TTCTAGATGGCTTTACCCCAGGCAGTATCCAATGCCTGCGAATTAGCCTC
AATCAGCGTCGGGAAGGCAGGAACGCAAATCTCGTATCCCTACAAACATG
AGCTTCCAGAACGGTTGCAGCTACTTCATGGACTTTGA back to topCoding sequence (CDS) from alignment at CM002465.1:730332..732019+ >rna5329 ID=rna5329|Name=rna5329|organism=Nannochloropsis gaditana|type=CDS|length=5814bp|location=Sequence derived from alignment at CM002465.1:730332..732019+ (Nannochloropsis gaditana)
ATGGATAGCAAAATTCAGAAGAGTATAGTTTGCGTGGGCAGCTTAAATGT
GGATTTGTTTTGCTATTTGCACGACAAATTCCCAGAACCAGGTAGAACTC
TCCAAGGCTCCCACTCTGCTACATGCTGTGGGGGTAAAGGAGGCAATCAA
GCGGTCATGGCTGCACGTCTCGGTGCACCGACGTCCATGGTGGGCATGGT
GGGCAGGGACGTTTTTGGGAACACGTTGCGGGAGGCTTTGATTCACGACG
GTGTTAGCATCAAACCTCTCAGAGAAGCAGCCGACGGGACTAGCACGGGC
ACGGCGCAAATACTGGTCAACGGGCGAGGGGAGAATATGATCATCATCAC
CGCTGGTGCCAATGGAAAGCTGACGCCCACCGACGTGCAAGCTGCAGAGA
GTGATatcgcagcagcagctgttGTAATGGTTCAGCTCGAAGTGCCCCTG
GAAGCGACCCGAGAAGCCCTCCGTCTCGCCCGGGCCCACGAGGTCTTCAG
CATTCTTAACCCCGCACCGgccccccggggggggctTGACCAGgagctcc
tctccttggcctcgcTAGTTTGCCCAAATGAGACGGAGCTCGCCGTGCTC
ACCCAGAAGCCTGCCAAAACTCTGTCGGAGATAGAAGCGGCCGCGCATCG
TCTCCGGGGCATGGGTGCAGCCAGGGTGCTCGTGACGctcggggagagag
gcacCCTGTTGGTGACAGAAAAGGACGGCGAGGACCACGTGTTGCTGACT
CCGAGCCCGAAGGTAGAAATGGTGGTGGATACAAGTGGGGCGGGAGACTG
TTTCATCGGCAGCCTGGCGGCCTATCTGTCAAGCGGGATGGCTTTACCCC
AGGCAGTATCCAATGCCTGCGAATTAGCCTCAATCAGCGTCGGGAAGGCA
GGAACGCAAATCTCGTATCCCTACAAACATGAGCTTCCAGAACGGTTGCA
GCTACTTCATGGACTTTGAATGGATAGCAAAATTCAGAAGAGTATAGTTT
GCGTGGGCAGCTTAAATGTGGATTTGTTTTGCTATTTGCACGACAAATTC
CCAGAACCAGGTAGAACTCTCCAAGGCTCCCACTCTGCTACATGCTGTGG
GGGTAAAGGAGGCAATCAAGCGGTCATGGCTGCACGTCTCGGTGCACCGA
CGTCCATGGTGGGCATGGTGGGCAGGGACGTTTTTGGGAACACGTTGCGG
GAGGCTTTGATTCACGACGGTGTTAGCATCAAACCTCTCAGAGAAGCAGC
CGACGGGACTAGCACGGGCACGGCGCAAATACTGGTCAACGGGCGAGGGG
AGAATATGATCATCATCACCGCTGGTGCCAATGGAAAGCTGACGCCCACC
GACGTGCAAGCTGCAGAGAGTGATatcgcagcagcagctgttGTAATGGT
TCAGCTCGAAGTGCCCCTGGAAGCGACCCGAGAAGCCCTCCGTCTCGCCC
GGGCCCACGAGGTCTTCAGCATTCTTAACCCCGCACCGgccccccggggg
gggctTGACCAGgagctcctctccttggcctcgcTAGTTTGCCCAAATGA
GACGGAGCTCGCCGTGCTCACCCAGAAGCCTGCCAAAACTCTGTCGGAGA
TAGAAGCGGCCGCGCATCGTCTCCGGGGCATGGGTGCAGCCAGGGTGCTC
GTGACGctcggggagagaggcacCCTGTTGGTGACAGAAAAGGACGGCGA
GGACCACGTGTTGCTGACTCCGAGCCCGAAGGTAGAAATGGTGGTGGATA
CAAGTGGGGCGGGAGACTGTTTCATCGGCAGCCTGGCGGCCTATCTGTCA
AGCGGGATGGCTTTACCCCAGGCAGTATCCAATGCCTGCGAATTAGCCTC
AATCAGCGTCGGGAAGGCAGGAACGCAAATCTCGTATCCCTACAAACATG
AGCTTCCAGAACGGTTGCAGCTACTTCATGGACTTTGAATGGATAGCAAA
ATTCAGAAGAGTATAGTTTGCGTGGGCAGCTTAAATGTGGATTTGTTTTG
CTATTTGCACGACAAATTCCCAGAACCAGGTAGAACTCTCCAAGGCTCCC
ACTCTGCTACATGCTGTGGGGGTAAAGGAGGCAATCAAGCGGTCATGGCT
GCACGTCTCGGTGCACCGACGTCCATGGTGGGCATGGTGGGCAGGGACGT
TTTTGGGAACACGTTGCGGGAGGCTTTGATTCACGACGGTGTTAGCATCA
AACCTCTCAGAGAAGCAGCCGACGGGACTAGCACGGGCACGGCGCAAATA
CTGGTCAACGGGCGAGGGGAGAATATGATCATCATCACCGCTGGTGCCAA
TGGAAAGCTGACGCCCACCGACGTGCAAGCTGCAGAGAGTGATatcgcag
cagcagctgttGTAATGGTTCAGCTCGAAGTGCCCCTGGAAGCGACCCGA
GAAGCCCTCCGTCTCGCCCGGGCCCACGAGGTCTTCAGCATTCTTAACCC
CGCACCGgccccccggggggggctTGACCAGgagctcctctccttggcct
cgcTAGTTTGCCCAAATGAGACGGAGCTCGCCGTGCTCACCCAGAAGCCT
GCCAAAACTCTGTCGGAGATAGAAGCGGCCGCGCATCGTCTCCGGGGCAT
GGGTGCAGCCAGGGTGCTCGTGACGctcggggagagaggcacCCTGTTGG
TGACAGAAAAGGACGGCGAGGACCACGTGTTGCTGACTCCGAGCCCGAAG
GTAGAAATGGTGGTGGATACAAGTGGGGCGGGAGACTGTTTCATCGGCAG
CCTGGCGGCCTATCTGTCAAGCGGGATGGCTTTACCCCAGGCAGTATCCA
ATGCCTGCGAATTAGCCTCAATCAGCGTCGGGAAGGCAGGAACGCAAATC
TCGTATCCCTACAAACATGAGCTTCCAGAACGGTTGCAGCTACTTCATGG
ACTTTGAATGGATAGCAAAATTCAGAAGAGTATAGTTTGCGTGGGCAGCT
TAAATGTGGATTTGTTTTGCTATTTGCACGACAAATTCCCAGAACCAGGT
AGAACTCTCCAAGGCTCCCACTCTGCTACATGCTGTGGGGGTAAAGGAGG
CAATCAAGCGGTCATGGCTGCACGTCTCGGTGCACCGACGTCCATGGTGG
GCATGGTGGGCAGGGACGTTTTTGGGAACACGTTGCGGGAGGCTTTGATT
CACGACGGTGTTAGCATCAAACCTCTCAGAGAAGCAGCCGACGGGACTAG
CACGGGCACGGCGCAAATACTGGTCAACGGGCGAGGGGAGAATATGATCA
TCATCACCGCTGGTGCCAATGGAAAGCTGACGCCCACCGACGTGCAAGCT
GCAGAGAGTGATatcgcagcagcagctgttGTAATGGTTCAGCTCGAAGT
GCCCCTGGAAGCGACCCGAGAAGCCCTCCGTCTCGCCCGGGCCCACGAGG
TCTTCAGCATTCTTAACCCCGCACCGgccccccggggggggctTGACCAG
gagctcctctccttggcctcgcTAGTTTGCCCAAATGAGACGGAGCTCGC
CGTGCTCACCCAGAAGCCTGCCAAAACTCTGTCGGAGATAGAAGCGGCCG
CGCATCGTCTCCGGGGCATGGGTGCAGCCAGGGTGCTCGTGACGctcggg
gagagaggcacCCTGTTGGTGACAGAAAAGGACGGCGAGGACCACGTGTT
GCTGACTCCGAGCCCGAAGGTAGAAATGGTGGTGGATACAAGTGGGGCGG
GAGACTGTTTCATCGGCAGCCTGGCGGCCTATCTGTCAAGCGGGATGGCT
TTACCCCAGGCAGTATCCAATGCCTGCGAATTAGCCTCAATCAGCGTCGG
GAAGGCAGGAACGCAAATCTCGTATCCCTACAAACATGAGCTTCCAGAAC
GGTTGCAGCTACTTCATGGACTTTGAATGGATAGCAAAATTCAGAAGAGT
ATAGTTTGCGTGGGCAGCTTAAATGTGGATTTGTTTTGCTATTTGCACGA
CAAATTCCCAGAACCAGGTAGAACTCTCCAAGGCTCCCACTCTGCTACAT
GCTGTGGGGGTAAAGGAGGCAATCAAGCGGTCATGGCTGCACGTCTCGGT
GCACCGACGTCCATGGTGGGCATGGTGGGCAGGGACGTTTTTGGGAACAC
GTTGCGGGAGGCTTTGATTCACGACGGTGTTAGCATCAAACCTCTCAGAG
AAGCAGCCGACGGGACTAGCACGGGCACGGCGCAAATACTGGTCAACGGG
CGAGGGGAGAATATGATCATCATCACCGCTGGTGCCAATGGAAAGCTGAC
GCCCACCGACGTGCAAGCTGCAGAGAGTGATatcgcagcagcagctgttG
TAATGGTTCAGCTCGAAGTGCCCCTGGAAGCGACCCGAGAAGCCCTCCGT
CTCGCCCGGGCCCACGAGGTCTTCAGCATTCTTAACCCCGCACCGgcccc
ccggggggggctTGACCAGgagctcctctccttggcctcgcTAGTTTGCC
CAAATGAGACGGAGCTCGCCGTGCTCACCCAGAAGCCTGCCAAAACTCTG
TCGGAGATAGAAGCGGCCGCGCATCGTCTCCGGGGCATGGGTGCAGCCAG
GGTGCTCGTGACGctcggggagagaggcacCCTGTTGGTGACAGAAAAGG
ACGGCGAGGACCACGTGTTGCTGACTCCGAGCCCGAAGGTAGAAATGGTG
GTGGATACAAGTGGGGCGGGAGACTGTTTCATCGGCAGCCTGGCGGCCTA
TCTGTCAAGCGGGATGGCTTTACCCCAGGCAGTATCCAATGCCTGCGAAT
TAGCCTCAATCAGCGTCGGGAAGGCAGGAACGCAAATCTCGTATCCCTAC
AAACATGAGCTTCCAGAACGGTTGCAGCTACTTCATGGACTTTGAATGGA
TAGCAAAATTCAGAAGAGTATAGTTTGCGTGGGCAGCTTAAATGTGGATT
TGTTTTGCTATTTGCACGACAAATTCCCAGAACCAGGTAGAACTCTCCAA
GGCTCCCACTCTGCTACATGCTGTGGGGGTAAAGGAGGCAATCAAGCGGT
CATGGCTGCACGTCTCGGTGCACCGACGTCCATGGTGGGCATGGTGGGCA
GGGACGTTTTTGGGAACACGTTGCGGGAGGCTTTGATTCACGACGGTGTT
AGCATCAAACCTCTCAGAGAAGCAGCCGACGGGACTAGCACGGGCACGGC
GCAAATACTGGTCAACGGGCGAGGGGAGAATATGATCATCATCACCGCTG
GTGCCAATGGAAAGCTGACGCCCACCGACGTGCAAGCTGCAGAGAGTGAT
atcgcagcagcagctgttGTAATGGTTCAGCTCGAAGTGCCCCTGGAAGC
GACCCGAGAAGCCCTCCGTCTCGCCCGGGCCCACGAGGTCTTCAGCATTC
TTAACCCCGCACCGgccccccggggggggctTGACCAGgagctcctctcc
ttggcctcgcTAGTTTGCCCAAATGAGACGGAGCTCGCCGTGCTCACCCA
GAAGCCTGCCAAAACTCTGTCGGAGATAGAAGCGGCCGCGCATCGTCTCC
GGGGCATGGGTGCAGCCAGGGTGCTCGTGACGctcggggagagaggcacC
CTGTTGGTGACAGAAAAGGACGGCGAGGACCACGTGTTGCTGACTCCGAG
CCCGAAGGTAGAAATGGTGGTGGATACAAGTGGGGCGGGAGACTGTTTCA
TCGGCAGCCTGGCGGCCTATCTGTCAAGCGGGATGGCTTTACCCCAGGCA
GTATCCAATGCCTGCGAATTAGCCTCAATCAGCGTCGGGAAGGCAGGAAC
GCAAATCTCGTATCCCTACAAACATGAGCTTCCAGAACGGTTGCAGCTAC
TTCATGGACTTTGA back to top
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