EWM25391.1, cds5316 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM25391.1 vs. NCBI_GenBank
Match: gi|585107152|gb|EWM25391.1| (ribokinase [Nannochloropsis gaditana]) HSP 1 Score: 651.358 bits (1679), Expect = 0.000e+0 Identity = 322/322 (100.00%), Postives = 322/322 (100.00%), Query Frame = 0 Query: 1 MDSKIQKSIVCVGSLNVDLFCYLHDKFPEPGRTLQGSHSATCCGGKGGNQAVMAARLGAPTSMVGMVGRDVFGNTLREALIHDGVSIKPLREAADGTSTGTAQILVNGRGENMIIITAGANGKLTPTDVQAAESDIAAAAVVMVQLEVPLEATREALRLARAHEVFSILNPAPAPRGGLDQELLSLASLVCPNETELAVLTQKPAKTLSEIEAAAHRLRGMGAARVLVTLGERGTLLVTEKDGEDHVLLTPSPKVEMVVDTSGAGDCFIGSLAAYLSSGMALPQAVSNACELASISVGKAGTQISYPYKHELPERLQLLHGL 322 MDSKIQKSIVCVGSLNVDLFCYLHDKFPEPGRTLQGSHSATCCGGKGGNQAVMAARLGAPTSMVGMVGRDVFGNTLREALIHDGVSIKPLREAADGTSTGTAQILVNGRGENMIIITAGANGKLTPTDVQAAESDIAAAAVVMVQLEVPLEATREALRLARAHEVFSILNPAPAPRGGLDQELLSLASLVCPNETELAVLTQKPAKTLSEIEAAAHRLRGMGAARVLVTLGERGTLLVTEKDGEDHVLLTPSPKVEMVVDTSGAGDCFIGSLAAYLSSGMALPQAVSNACELASISVGKAGTQISYPYKHELPERLQLLHGL Sbjct: 1 MDSKIQKSIVCVGSLNVDLFCYLHDKFPEPGRTLQGSHSATCCGGKGGNQAVMAARLGAPTSMVGMVGRDVFGNTLREALIHDGVSIKPLREAADGTSTGTAQILVNGRGENMIIITAGANGKLTPTDVQAAESDIAAAAVVMVQLEVPLEATREALRLARAHEVFSILNPAPAPRGGLDQELLSLASLVCPNETELAVLTQKPAKTLSEIEAAAHRLRGMGAARVLVTLGERGTLLVTEKDGEDHVLLTPSPKVEMVVDTSGAGDCFIGSLAAYLSSGMALPQAVSNACELASISVGKAGTQISYPYKHELPERLQLLHGL 322
BLAST of EWM25391.1 vs. NCBI_GenBank
Match: gi|504244349|ref|WP_014431451.1| (ribokinase [Caldilinea aerophila] >gi|381381393|dbj|BAL98209.1| ribokinase [Caldilinea aerophila DSM 14535 = NBRC 104270]) HSP 1 Score: 250.751 bits (639), Expect = 2.010e-78 Identity = 141/310 (45.48%), Postives = 201/310 (64.84%), Query Frame = 0 Query: 8 SIVCVGSLNVDLFCYLHDKFPEPGRTLQGSHSATCCGGKGGNQAVMAARLGAPTSMVGMVGRDVFGNTLREALIHDGVSIKPLREAADGTSTGTAQILVNGRGENMIIITAGANGKLTPTDVQAAESDIAAAAVVMVQLEVPLEATREALRLARAHEVFSILNPAPAPRGGLDQELLSLASLVCPNETELAVLTQKPAKTLSEIEAAAHRLRGMGAARVLVTLGERGTLLVTEKDGEDHVLLTPSPKVEMVVDTSGAGDCFIGSLAAYLSSGMALPQAVSNACELASISVGKAGTQISYPYKHELPERLQ 317 SI VGS+N+D+ Y+ ++FP PG TL G T GGKG NQAVMAARLGA SMVG +G D+FG+ +R L +G+ +RE + G S+G A I ++ +G+N II+ GANG +T DV+ A++ I A V++ Q+EVP+EA ALR+AR V +I N AP + +E+ L+ + CPNE+E +LT P TL + AA + GA L+TLG +G L VT D E+HV P+P+V+ VDT+GAGD F+GSLA +L++G+ + +A++ A +A+ISV GTQ SYP + +LPE L+ Sbjct: 5 SICVVGSINLDMNAYV-ERFPRPGETLHGRRFTTGYGGKGANQAVMAARLGAKVSMVGRIGDDIFGHDMRRNLESEGIRTDFVRE-SKGVSSGVAVITIDEQGQNQIIVIPGANGLVTAVDVEEAQAAITGAQVLLCQMEVPMEANLAALRIARNAGVTTIFNSAPV-SSEVPEEVYQLSDIFCPNESEAELLTGVPVHTLDDARLAASMIVTRGARAALITLGAQGCLYVT-ADQEEHV---PAPRVK-AVDTTGAGDAFVGSLAHFLAAGLPVLEAIARANTIAAISVQHPGTQASYPRRADLPETLR 306
BLAST of EWM25391.1 vs. NCBI_GenBank
Match: gi|1126181421|ref|XP_019623190.1| (PREDICTED: ribokinase-like isoform X1 [Branchiostoma belcheri]) HSP 1 Score: 244.202 bits (622), Expect = 7.062e-76 Identity = 144/313 (46.01%), Postives = 192/313 (61.34%), Query Frame = 0 Query: 9 IVCVGSLNVDLFCYLHDKFPEPGRTLQGSHSATCCGGKGGNQAVMAARLGAPTSMVGMVGRDVFGNTLREALIHDGVSIKPLREAADGTSTGTAQILVNGRGENMIIITAGANGKLTPTDVQAAESDIAAAAVVMVQLEVPLEATREALRLARAHEVFSILNPAPAPRGGLDQELLSLASLVCPNETELAVLTQKPAKTLSEIEAAAHRLRGMGAARVLVTLGERGTLL---VTEKDGEDHVLLTPSPKVEMVVDTSGAGDCFIGSLAAYLS--SGMALPQAVSNACELASISVGKAGTQISYPYKHELPERL 316 +V VGS N+DL Y+ + P+PG T+ G+ + GGKG NQ VMAARLGA T+MV VG DVFG+ + +GV++ + E STG A I VN G+N III +GAN KLT DV+ ES I A V++ QLE+ E + EALR+ + H V +ILNPAPA LD EL L+ + CPNETE +LT P T E E AA L G +V++TLGE+G L V+EK + P+ KV VDT+GAGD F+GSLA Y++ + L + + AC ++SISV GTQ S+PY+ +LP+ L Sbjct: 6 VVVVGSCNMDLISYV-SRLPKPGETIHGNKFSLGFGGKGANQCVMAARLGAATAMVAKVGDDVFGSNFIQNFKDNGVNVDNV-EVTKEASTGVAPIAVNEDGQNSIIIVSGANLKLTAADVKEHESVITQAKVLICQLEIQPETSLEALRIGKQHGVTTILNPAPA-EASLDPELYKLSDIFCPNETEAEILTGLPVTTAEEAEKAADVLLDKGCEKVIITLGEKGCLCKSSVSEKG-----IHVPARKVSP-VDTTGAGDAFVGSLAYYMACHKDLRLEEVIQKACHISSISVCSPGTQTSFPYRKDLPKDL 309
BLAST of EWM25391.1 vs. NCBI_GenBank
Match: gi|449682172|ref|XP_002165880.2| (PREDICTED: ribokinase-like [Hydra vulgaris]) HSP 1 Score: 229.95 bits (585), Expect = 3.223e-70 Identity = 136/313 (43.45%), Postives = 184/313 (58.79%), Query Frame = 0 Query: 9 IVCVGSLNVDLFCYLHDKFPEPGRTLQGSHSATCCGGKGGNQAVMAARLGAPTSMVGMVGRDVFGNTLREALIHDGVSIKPLREAADGTSTGTAQILVNGRGENMIIITAGANGKLTPTDVQAAESDIAAAAVVMVQLEVPLEATREALRLARAHEVFSILNPAPAPRGGLDQELLSLASLVCPNETELAVLTQKPAKT---LSEIEAAAHRLRGMGAARVLVTLGERGTLLVTEKDGEDHVLLTPSPKVEMVVDTSGAGDCFIGSLAAYLS--SGMALPQAVSNACELASISVGKAGTQISYPYKHELPERL 316 IV VGS N DLF Y+ ++FP+ G TL G CGGKG NQ VM+A+LGA T+M+G VG DVFG +A GV I L+ T TG A I VN +GEN I+IT GAN ++ V+A+ I A V + QLEV L T AL++A + V +I NPAPA + L E L +S++C NETE +LT +++ E A L G +V++T+G G + + H +LTP V+ VVDT+GAGDCF+GSLA +L+ ++ + V + +ASISV K GTQ SYP ++LPE L Sbjct: 3 IVVVGSCNADLFSYV-ERFPKVGETLCGKKFVIGCGGKGANQCVMSAKLGAKTAMIGCVGDDVFGEMFLKAFSTAGVDITNLKTVLSAT-TGVATITVNEKGENSIVITKGANNCISTDQVEASIDTIVKAKVALFQLEVDLATTLYALKIAYENGVTTIFNPAPALK-ELPNEFLMYSSILCCNETEAEILTGLSINLDFPVTDCENAVRNLLSKGPLKVVLTMGSYGAIFGEKGSDAVHHILTPPSIVDKVVDTTGAGDCFVGSLAYFLAQRKDLSFNEVVRRSVAIASISVTKHGTQTSYPSLNDLPEDL 312
BLAST of EWM25391.1 vs. NCBI_GenBank
Match: gi|957831928|ref|XP_014665959.1| (PREDICTED: ribokinase-like [Priapulus caudatus]) HSP 1 Score: 229.95 bits (585), Expect = 3.238e-70 Identity = 131/308 (42.53%), Postives = 184/308 (59.74%), Query Frame = 0 Query: 13 GSLNVDLFCYLHDKFPEPGRTLQGSHSATCCGGKGGNQAVMAARLGAPTSMVGMVGRDVFGNTLREALIHDGVSIKPLREAADGTSTGTAQILVNGRGENMIIITAGANGKLTPTDVQAAESDIAAAAVVMVQLEVPLEATREALRLARAHEVFSILNPAPAPRGGLDQELLSLASLVCPNETELAVLTQKPAKTLSEIEAAAHRLRGMGAARVLVTLGERGTLLVTEKDGEDHVLLTPSPKVEMVVDTSGAGDCFIGSLAAYLSS--GMALPQAVSNACELASISVGKAGTQISYPYKHELPERLQL 318 GS N DL Y +FP PG T+ G + GGKG NQAV AARLGA T+M+G VG D FGN + ++ ++I L DGTSTGTA I V+ G+N I+I GAN L+ +DV AAE IA A +++ QLEV E + A++LAR H V ++ NPAPA R L + +L + CPNE E + P K + E A+ G V++TLG++G + VT+ E+ + +V VVDT+GAGD F G+LA Y++ G+A+ Q + +CE+A +SV +GTQ SYP + ++P+ L L Sbjct: 11 GSCNTDLITYTA-RFPNPGETIHGHSFSIGFGGKGANQAVCAARLGASTAMIGKVGNDTFGNDTTKNFQNNNINIDHLG-MEDGTSTGTAVITVDESGQNSIVIVNGANSLLSKSDVSAAEPMIARAKILVCQLEVEPEVSIAAMKLARQHNVMTLFNPAPA-RANLPPDAWTLCDVFCPNEAEAEMFAGMPVKAKEDAEKASLFFLDKGCKIVIITLGDKGAVYVTQ---ENRTPVHVPCRVTKVVDTTGAGDAFAGALAYYMACHPGLAIGQVIRRSCEIARMSVQHSGTQNSYPVRQQIPDELFL 312
BLAST of EWM25391.1 vs. NCBI_GenBank
Match: gi|1085347258|gb|OGV19787.1| (ribokinase [Lentisphaerae bacterium GWF2_38_69]) HSP 1 Score: 229.565 bits (584), Expect = 4.272e-70 Identity = 129/311 (41.48%), Postives = 182/311 (58.52%), Query Frame = 0 Query: 9 IVCVGSLNVDLFCYLHDKFPEPGRTLQGSHSATCCGGKGGNQAVMAARLGAPTSMVGMVGRDVFGNTLREALIHDGVSIKPLREAADGTSTGTAQILVNGRGENMIIITAGANGKLTPTDVQAAESDIAAAAVVMVQLEVPLEATREALRLARAHEVFSILNPAPAPRGGLDQELLSLASLVCPNETELAVLTQKPAKTLSEIEAAAHRLRGMGAARVLVTLGERGTLLVTEKDGEDHVLLTPSPKVEMVVDTSGAGDCFIGSLAAYLSSGMALPQAVSNACELASISVGKAGTQISYPYKHELPERLQLL 319 I VGS N D+ Y D+ P+ G T+ G+ GGKG NQAV AA+LGA +MV +G DVFG E + + K + D S+G A I V+ +G N II+ +GAN +T +V+A+ IA++ +++ Q EVPLE T++AL++AR V ++ NPAPAP L + L + CPNETE +LT + KTL + A L G +VL+TLG +G L V D + H + P V+ DT+GAGDCFIGS A +L +G++ +A AC +AS+SV K GTQ S+P+ ELP L + Sbjct: 6 ICVVGSCNYDMIAYT-DRLPKQGETIMGTDFKMGFGGKGANQAVAAAKLGAEVTMVAKLGEDVFGKQTMENFKNLNIVSKYVY-FTDKASSGVAPIWVDKQGHNSIIVVSGANDLITVEEVEASRKAIASSKILICQNEVPLEVTKKALQIAREEGVITVFNPAPAPTVELSNDYFELTDIFCPNETEAELLTHRTVKTLEDAVDAGRALIKKGVKKVLMTLGSKGCLFV---DAKTHTHI-PGLHVK-AFDTTGAGDCFIGSFAYFLGAGLSEEEAARRACIVASVSVQKPGTQKSFPFAKELPADLFVF 309
BLAST of EWM25391.1 vs. NCBI_GenBank
Match: gi|1022769552|gb|KZS14027.1| (Ribokinase [Daphnia magna]) HSP 1 Score: 229.565 bits (584), Expect = 6.161e-70 Identity = 138/314 (43.95%), Postives = 187/314 (59.55%), Query Frame = 0 Query: 6 QKSIVCVGSLNVDLFCYLHDKFPEPGRTLQGSHSATCCGGKGGNQAVMAARLGAPTSMVGMVGRDVFGNTLREALIHDGVSIKPLREAADGTSTGTAQILVNGRGENMIIITAGANGKLTPTDVQAAESDIAAAAVVMVQLEVPLEATREALRLARAHEVFSILNPAPAPRGGLDQELLSLASLVCPNETELAVLTQKPAKTLSEIEAAAHRLRGMGAAR-VLVTLGERGTLLVTEKDGEDHVLLTP----SPKVEMVVDTSGAGDCFIGSLAAYLSSGMALP--QAVSNACELASISVGKAGTQISYPYKHEL 312 Q IV +GS D+ Y+ P G TL GS A CCGGKG NQAV A RLGA T+++G +G D FG + +AL + + I TG AQI+V G+N I+I GAN LT DV ++ +A A +++ LE+P E L+LA VF+ILN APA L+++ +LA + C NETE +L +P + E +AAHRL G G + VLVTLG+ G LL++ D + L P +P+V+ +DT+GAGDCF+G+LA +L+ P +AV NAC +AS SV KAGTQ S+PYKHEL Sbjct: 6 QAHIVVLGSFMTDVVSYV-SHLPRVGETLCGSKLAICCGGKGANQAVSATRLGANTAIIGKLGNDSFGKSYLDALKKEQI-ITDFVGLTSEALTGLAQIIVEDSGQNSIVIVPGANNYLTTQDVNNSKDTLAKAKIMLSVLEIPCETVLSGLKLANELGVFTILNAAPAVE-NLEKDFYALADIFCVNETEAEMLIGQPVTSHDEALSAAHRLMGKGCKKHVLVTLGKHGALLLSRND--QNGFLEPVSVTAPEVK-AIDTTGAGDCFLGALAYFLAYHPDFPLSKAVVNACRVASKSVQKAGTQTSFPYKHEL 313
BLAST of EWM25391.1 vs. NCBI_GenBank
Match: gi|1126523417|ref|WP_075161753.1| (ribokinase [delta proteobacterium PSCGC 5296]) HSP 1 Score: 227.254 bits (578), Expect = 3.265e-69 Identity = 129/308 (41.88%), Postives = 183/308 (59.42%), Query Frame = 0 Query: 9 IVCVGSLNVDLFCYLHDKFPEPGRTLQGSHSATCCGGKGGNQAVMAARLGAPTSMVGMVGRDVFGNTLREALIHDGVSIKPLREAADGTSTGTAQILVNGRGENMIIITAGANGKLTPTDVQAAESDIAAAAVVMVQLEVPLEATREALRLARAHEVFSILNPAPAPRGGLDQELLSLASLVCPNETELAVLTQKPAKTLSEIEAAAHRLRGMGAARVLVTLGERGTLLVTEKDGEDHVLLTPSPKVEMVVDTSGAGDCFIGSLAAYLSSGMALPQAVSNACELASISVGKAGTQISYPYKHELPERL 316 I VGS N DL Y D+ P+ G T+ G GGKG NQAV AA+LGA +M+ +G+D+FG E ++ + + S+G A I V+ G N II+ AGAN L+ ++V++A IA + V++ Q+E+ LE T AL +A+ V +I NPAPAP GL +++ L + CPNETE A+LT P +L E A L G +VL+TLG+ G+LL+TE + H+ P+ V+ V+DT+GAGDCFIGS A +L+ G + +A+ A +ASISV GTQ S+P ELP+ L Sbjct: 8 ICVVGSSNYDLIAYT-DRLPKLGETIHGDRFQMGFGGKGANQAVTAAKLGADVTMITKLGKDIFGEQTLENFKSLAINTDHVY-FTNKASSGVAPISVDKEGNNSIIVVAGANNLLSKSEVESARETIAKSNVLICQMEISLETTIRALEIAKEEGVTTIFNPAPAPADGLPEKIYKLTDIFCPNETETALLTGLPTNSLITAEEAGLALINKGLTKVLMTLGKNGSLLITE-NYSTHI---PTNDVK-VLDTTGAGDCFIGSFAYFLAGGFSELEAIKKASYVASISVSHTGTQTSFPLSSELPKEL 308
BLAST of EWM25391.1 vs. NCBI_GenBank
Match: gi|218760852|gb|ACL03318.1| (ribokinase [Desulfatibacillum alkenivorans AK-01]) HSP 1 Score: 233.032 bits (593), Expect = 7.939e-69 Identity = 139/309 (44.98%), Postives = 194/309 (62.78%), Query Frame = 0 Query: 9 IVCVGSLNVDLFCYLHDKFPEPGRTLQGSHSATCCGGKGGNQAVMAARLGAPTSMVGMVGRDVFGNTLREALIHDGVSIKPLREAADGTSTGTAQILVNGRGENMIIITAGANGKLTPTDVQAAESDIAAAAVVMVQLEVPLEATREALRLARAHEVFSILNPAPAPRGGLDQELLSLASLVCPNETELAVLTQKPAKTLSEIEAAAHRLRGMGAARVLVTLGERGTLLVTEKDGEDHVLLTPSPKVEMVVDTSGAGDCFIGSLAAYLSSGMALPQAVSNACELASISVGKAGTQISYPYKHEL-PERL 316 I VG+ N+DL Y+ ++ P G TL G + GGKG NQAVMAA+LG +MVG +GRDVFG GV++ + + S G A I V+ G N III GA+ L+ +++AAE+ IA + V++ QLE+P+E EALR+AR + V +I NPAPA R GL EL L+ + CPNE+E +LT P +T+ + E AA L G V++TLGERG LLV + +G H+ P+ KVE +DT+GAGDCF+GSLA +L++G +L A++ A ++A++SV GTQ S+P EL PE L Sbjct: 6 ICVVGACNIDLISYV-ERLPVLGETLHGKKFSMGFGGKGANQAVMAAKLGGEVAMVGKLGRDVFGENTLANFKKLGVNVSHVHFTEEAFS-GVAPIAVDDNGANSIIIVTGASDLLSAEEIRAAENAIAKSKVLVCQLEIPMEQNLEALRIARKNNVPTIFNPAPA-RPGLPDELYQLSDIFCPNESETEILTGMPVETMEQAEQAAKALLERGPKTVILTLGERGCLLV-DANGARHI---PTRKVE-AIDTTGAGDCFVGSLAFFLAAGKSLEDAINRANKIAAVSVCGQGTQSSFPGASELDPEIL 306
BLAST of EWM25391.1 vs. NCBI_GenBank
Match: gi|1073570268|ref|WP_070000072.1| (ribokinase [Cellulosilyticum sp. I15G10I2]) HSP 1 Score: 223.402 bits (568), Expect = 6.914e-68 Identity = 130/308 (42.21%), Postives = 183/308 (59.42%), Query Frame = 0 Query: 9 IVCVGSLNVDLFCYLHDKFPEPGRTLQGSHSATCCGGKGGNQAVMAARLGAPTSMVGMVGRDVFGNTLREALIHDGVSIKPLREAADGTSTGTAQILVNGRGENMIIITAGANGKLTPTDVQAAESDIAAAAVVMVQLEVPLEATREALRLARAHEVFSILNPAPAPRGGLDQELLSLASLVCPNETELAVLTQKPAKTLSEIEAAAHRLRGMGAARVLVTLGERGTLLVTEKDGEDHVLLTPSPKVEMVVDTSGAGDCFIGSLAAYLSSGMALPQAVSNACELASISVGKAGTQISYPYKHELPERL 316 I VGSLN+DL DK P+ G T G GGKG NQA A+LG +M+G VG D FG TL E+L HDGV + + + +G STG A I+VNG G+N II+ +GAN KL P D+ AE I +A+++ QLEVP+ + A + A+ + +++LNPAPA LDQELL L L+ PNETEL +L+ + T ++ AA L G ++VTLG G L + K +H P+ VE VDT+ AGD FIG++A LS G ++ A+ A ++++++V + G Q S P K E+ E + Sbjct: 2 ITVVGSLNMDLVTKT-DKVPKVGETFLGVEFKQAAGGKGANQADAIAKLGGKVAMIGRVGSDQFGKTLIESLKHDGVEVSQV-QVTEGISTGIATIIVNGDGDNSIIVVSGANFKLIPQDIDRAEEVIKESAIMIAQLEVPIGVIKYAFKKAKQYGKYTVLNPAPARE--LDQELLELTDLLVPNETELEILSGRTLVTKDDMLVAAKELMQKGVKEMIVTLGGNGCLHIN-KTSSNHY---PAHLVE-AVDTTAAGDSFIGAIATALSEGKSIEAAIHFAAKVSALTVTREGAQDSLPTKKEVEEYM 300 The following BLAST results are available for this feature:
BLAST of EWM25391.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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