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Properties
| Property Name | Value |
| Product | atp-dependent dna helicase q3 |
| Orig transcript id | gnl|cribi|Naga_100005g115.6721.mrna |
| Orig protein id | gnl|cribi|Naga_100005g115.6721 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
| CM002465.1 | supercontig | CM002465.1:700962..703427 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna5319 ID=rna5319|Name=rna5319|organism=Nannochloropsis gaditana|type=mRNA|length=1454bp GGCCTCCGCCACAATCTGCGTGCGGTACTCTTCCGTCCCTCTTCTAATAT GTGTCAAGAGGAGATCTGTCTTTGCGTGCATTCAGTCCTCCTCATTAATT GTGCAGGTGGTGCACAAACCTAGCCCAAGAAGGAAGGATTGGCAGACCGC CACATTGCTATCTACCCCCCCCCGAACCGCAACATCTTTCGCTTTCTCAG CCGACTCCGACACAATTTGCAATATCTGCTCGAAATGATCCCAGGCCGCA CCTTCTAGGGCCATGCCGGGCGTCCTCATGCCCGCCGACGGACTTGCTGG TGAGTTTGTTGGGACAAAGGGAGAAACTTACCAACGCCCCGTGATCAGCC GGGGCCGGCCGACGTCTCGTTTTGACCAGTTGGGTAGGATTGGCGAAGGG AGATTTGGAGACGTCTACATTGGCGCCGATCGGTCGACAGGCAAAGTCGT GGCAATCAAAGAAGTGCGACTTCCCAATCTTGAAAGAAATGGTCTGCCGA AGGCTGCTTTGCGGGAGCTGCGGGCTCTGCAGCACCTTGAGGGACACCAG CACGTCGTTCGCCTCCTGGATGCTTTCCCACGAGGAGGATCTCTGGCGCT TGTCCTGGAATACATGCCTAGCGACTTGGAAGTGATGTTTCGGACGCGGA GGTCCGTTTTCCCGGAGAGCCAAATCAAGTCCTACATGTGGATGCTGCTT CAAGGCCTTTCCTACCTCCATGCCCGGCGCATATTACACCGAGACTTGAA ACCATCCAATATCTTGCTGTCTGCCCGTGGAGTCATTAAGATCGGGGACC TCGGAAGCGCGCGTGTGGACAATGACCCTCCTCTCGAGCCTTACTCCCAC CAAGTGGGCACAGCTTGGTACCGGGCGCCTGAATTGCTCCTTGGGGCGCG ACGCTACGGTCCTGCGATAGACATGTGGGGTGCTGGGGTCATCATGGGGG AGATGGCTTGCCTTTCCCCTCTCTTTCCCGGACGCGGCGACCTGGACCAG ATCTTCCGCGTTTTGGAGGTCCTCGGCACCCCAAGCGCTTCGGAGATCGA GCAGTTTCCCGACTACAGGAAGATAGAACCCCCCTGCATGGCGAAGAAGG ACCTGTCGCAAGTCTTCCCCCGCGTGCCGCCTGCGGGGATGTGCCTGTTC GAGCAGCTTGTCGAGCTGGACCCGACGAAGCGAGTTTCGGCAGAGACCGC CTTGACCAATCGCTTCTTCTACATCGAGCCGGCAATTGAACACCCCGGAA ATTTTGCGGTCGTAACGAGGAAGCTTCCTCTCAGCGTAACTTCGATATTG GGAAGTCGCTTTGAGAATTGTTGGAAGGAAAGGAAGGGGGACAATGTCTT CGAGGATGTAATGAAATCATGTAGATTAGGAAGGGAATGAAAATGGAAGA TTTAAAATTTATGCCAAATTTTCATCACACCACTCTATGCCTCTCTTCTT TTAT back to topprotein sequence of rna5319 >rna5319-protein ID=rna5319-protein|Name=rna5319|organism=Nannochloropsis gaditana|type=polypeptide|length=444bp MIADSTSVKGSPDNELDARIVEVLRIAFGLQTFRQPQKDVIKHVLQGGSG LVLLPTGGGKSLCYQLPALLLDGVTVVVSPLIALMNDQVTALRKKGIDAR YCSSSLDPYLNKDILDDLRLRPEPRVKLLYVTPERLTTPSFLPVLQQLHA RKLLAALIVDEAHCISQWGHDFRPSYRRLEEVRALFPSLPCLGLTATATP RVQRDIVSTLRLPPSHVFRKSFDRPSLFYRVEYKPLLPDAQEVLATAIKQ AIGWRESGQGGVPGAGGWTGSAKREATASAAATESGSATNRLGQNCAGGS AIVYCWKRETCEELARALEGRGLSALAYHGKLPDARRRHVQAMFVEGGVQ VVAATLAFGMGIDKADVRVVAHWNIPPSLEAFYQESGRAGRDGGPALSLL FYCPRDAEGRFHMLHKELEGHGEAGREKQQAVERKKEQLDSRGG back to topmRNA from alignment at CM002465.1:700962..703427+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna5319 ID=rna5319|Name=rna5319|organism=Nannochloropsis gaditana|type=mRNA|length=2466bp|location=Sequence derived from alignment at CM002465.1:700962..703427+ (Nannochloropsis gaditana) ATGATAGCGGATTCCACATCAGTGAAAGGTTCACCTGACAATGAACTTGA
TGCGCGGATTGTTGAGGTCTTGCGCATCGCCTTCGGGCTCCAGACATTCC
GTCAACCGCAAAAGGCGAGTCTCACCATCTCTGTGCTTATTCACGTGATT
CATGAATGCACCTCCTTTGCGCACCCCTACAAGTAGAAAATATTTCATAC
GAAAGAAGAGTCCGGGCTCACCAGGGGTTCATAAGTGCGAGGGCAATCTT
TTCCCCCGCGTGCTTTTTTATGAGAGTTGTTTCCTTGACGTCGGTGCTGC
TTTCGGCTGAGTATATTCACGGTTTACTCTGACACTCCTTTTCTGCTGTA
CAGGATGTCATCAAGCATGTCCTTCAAGGAGGATCTGGCCTAGTGCTTCT
TCccacagggggagggaagagcctATGTTACCAACTGCCTGCGCTCCTCC
TGGACGGGGTCACTGTCGTTGTGTCTCCTCTGATCGCGCTCATGAACGAC
CAGGTTACCGCCCTGAGAAAAAAGGGTATAGACGCCCGCTactgcagctc
ctccctgGATCCCTATCTCAACAAAGACATCCTCGACGACCTTCGTCTTC
GACCGGAGCCCCGCGTCAAGCTCCTGTACGTGACCCCAGAGCGCCtgacc
accccctccttccttcccgtcctccaacaGCTCCACGCCCGCAAACTCCT
CGCTGCTCTCATCGTCGACGAGGCACACTGCATCTCTCAGTGGGGCCACG
ATTTTCGGCCGTCGTACAGGCGCTTGGAAGAAGTGcgcgccctcttcccc
tccctgccctgctTGGGGCTCacggccaccgccacccccaGGGTCCAACG
GGACATCGTCTCCacgctccgcctccctccctcgcacgTCTTCCGCAAAT
CCTTcgaccgcccctccctcttttacCGGGTCGAGTAcaagcccctcctt
cccgacgctcaggaggtgctggccacTGCCATCAAGCAAGCCATCGGGTG
GCGCGAGAGCGGTGGGGATTCGGTCCTTTCTCGCGGcacgggaagggaaa
gagcgtcTGCCTCACTGACTACGGGAGCTCAGGCACGCGCGGGCTCCTTG
catgcctttttccctccccgtctggGAGAGCACCGTgcaggccaaggcgg
ggtccccggggcggggggctggaCAGGCAGTGCCAAGAGAgaggccaccg
cctccgcggcTGCGACTGAGTCGGGGAGTGCCACGAACAGGCTAGGGCAG
AACTGTGCCGGGGGAAGCGCCATCGTTTACTGCTGGAAGCGTGAGACATG
CGAAGAGCTGGCCCGCGCgctggaagggcggggcctCTCTGCGCTTGCCT
ACCACGGGAAGCTGCCGGAcgcgcggcggcggcacgTGCAAGCCATGttc
gtggaggggggggtacAGGTGGTTGCGGCCACGCTTGCCTTCGGGATGGG
CATCGACAAAGCCGATGTGCGGGTGGTGGCCCATTGGAACGTGAGtgccc
cgcccgggcccctgGTCTCTGATACCCTCCATGTCTCTGACATTGCCCCG
ACGACTGTCTGTAtatgtcttcctctttcaccaACTGTCtgttcccttct
tcctctcaccCACCAACCCTTTGCCcagatccctccctccttggagGCCT
TCTACCAAGAGAGCGGGCGGGCTGGGCGGGACGGGGGAcctgccctctct
ctcctcttctactGCCCTCGGGACGCGGAGGGTCGGTTCCACATGCTGCA
CAAGGAGTTGGAAGGCcacggggaggcagggagagagaagcagCAGGCAG
TGGAACGAAAGAAGGAGCAACTGGACAGCGTGCTTGAATACTGCCAAGAG
GCAGAGACGTGCCGCCGCCGAGTGTTACTCAGGCACTTCGGGGACAAGAC
GGGCGCGCGACCGGCAGGATGGAGAAAGGACCGCTGCTGTGACGTCTGCA
TGGACGGAGGTCGCgacgtgaggaggagattgaCGGCAAtgcgggcggaa
ggggggaggaagaggaggagggacgggggtaGGGGGTACGGCGCAAGCga
agagggtgaggatgaaggggggaagggcaaatACCGAGGCAAGCAGGGAG
GTATGTTCGAGGACGACGGCATGAGtggtggggaggtggagaaggaagcg
ggtgagaagggcaaaggaagtggaggagggggcgtcGAACGCGATCCCGA
GCTGGAGGCCGCGATCGCCCATACCCAAAGCAGCGCACGCTTGAAGAAGC
GACTGCAGACGGCCCGTGCGGCGGATAAGCCACTGGAGGAGCAAGCCCGT
GCCGTGCTTCAGGCTTACgttgaggacgaggagaacgagggggcggggtt
tgcacggggaaggggcaataggggggaaaagagcagACAGGGCCCGATGA
AGGAGCTACGGCATGTGCAGCGGGTCGGGGCTCCCTTACCGATGCTCACG
ACAGCGAGGGGGCTGA back to topCoding sequence (CDS) from alignment at CM002465.1:700962..703427+ >rna5319 ID=rna5319|Name=rna5319|organism=Nannochloropsis gaditana|type=CDS|length=6675bp|location=Sequence derived from alignment at CM002465.1:700962..703427+ (Nannochloropsis gaditana) ATGATAGCGGATTCCACATCAGTGAAAGGTTCACCTGACAATGAACTTGA TGCGCGGATTGTTGAGGTCTTGCGCATCGCCTTCGGGCTCCAGACATTCC GTCAACCGCAAAAGGATGTCATCAAGCATGTCCTTCAAGGAGGATCTGGC CTAGTGCTTCTTCccacagggggagggaagagcctATGTTACCAACTGCC TGCGCTCCTCCTGGACGGGGTCACTGTCGTTGTGTCTCCTCTGATCGCGC TCATGAACGACCAGGTTACCGCCCTGAGAAAAAAGGGTATAGACGCCCGC TactgcagctcctccctgGATCCCTATCTCAACAAAGACATCCTCGACGA CCTTCGTCTTCGACCGGAGCCCCGCGTCAAGCTCCTGTACGTGACCCCAG AGCGCCtgaccaccccctccttccttcccgtcctccaacaGCTCCACGCC CGCAAACTCCTCGCTGCTCTCATCGTCGACGAGGCACACTGCATCTCTCA GTGGGGCCACGATTTTCGGCCGTCGTACAGGCGCTTGGAAGAAGTGcgcg ccctcttcccctccctgccctgctTGGGGCTCacggccaccgccaccccc aGGGTCCAACGGGACATCGTCTCCacgctccgcctccctccctcgcacgT CTTCCGCAAATCCTTcgaccgcccctccctcttttacCGGGTCGAGTAca agcccctccttcccgacgctcaggaggtgctggccacTGCCATCAAGCAA GCCATCGGGTGGCGCGAGAGCGgccaaggcggggtccccggggcgggggg ctggaCAGGCAGTGCCAAGAGAgaggccaccgcctccgcggcTGCGACTG AGTCGGGGAGTGCCACGAACAGGCTAGGGCAGAACTGTGCCGGGGGAAGC GCCATCGTTTACTGCTGGAAGCGTGAGACATGCGAAGAGCTGGCCCGCGC gctggaagggcggggcctCTCTGCGCTTGCCTACCACGGGAAGCTGCCGG AcgcgcggcggcggcacgTGCAAGCCATGttcgtggaggggggggtacAG GTGGTTGCGGCCACGCTTGCCTTCGGGATGGGCATCGACAAAGCCGATGT GCGGGTGGTGGCCCATTGGAACatccctccctccttggagGCCTTCTACC AAGAGAGCGGGCGGGCTGGGCGGGACGGGGGAcctgccctctctctcctc ttctactGCCCTCGGGACGCGGAGGGTCGGTTCCACATGCTGCACAAGGA GTTGGAAGGCcacggggaggcagggagagagaagcagCAGGCAGTGGAAC GAAAGAAGGAGCAACTGGACAGCCGAGGGGGCTGAATGATAGCGGATTCC ACATCAGTGAAAGGTTCACCTGACAATGAACTTGATGCGCGGATTGTTGA GGTCTTGCGCATCGCCTTCGGGCTCCAGACATTCCGTCAACCGCAAAAGG ATGTCATCAAGCATGTCCTTCAAGGAGGATCTGGCCTAGTGCTTCTTCcc acagggggagggaagagcctATGTTACCAACTGCCTGCGCTCCTCCTGGA CGGGGTCACTGTCGTTGTGTCTCCTCTGATCGCGCTCATGAACGACCAGG TTACCGCCCTGAGAAAAAAGGGTATAGACGCCCGCTactgcagctcctcc ctgGATCCCTATCTCAACAAAGACATCCTCGACGACCTTCGTCTTCGACC GGAGCCCCGCGTCAAGCTCCTGTACGTGACCCCAGAGCGCCtgaccaccc cctccttccttcccgtcctccaacaGCTCCACGCCCGCAAACTCCTCGCT GCTCTCATCGTCGACGAGGCACACTGCATCTCTCAGTGGGGCCACGATTT TCGGCCGTCGTACAGGCGCTTGGAAGAAGTGcgcgccctcttcccctccc tgccctgctTGGGGCTCacggccaccgccacccccaGGGTCCAACGGGAC ATCGTCTCCacgctccgcctccctccctcgcacgTCTTCCGCAAATCCTT cgaccgcccctccctcttttacCGGGTCGAGTAcaagcccctccttcccg acgctcaggaggtgctggccacTGCCATCAAGCAAGCCATCGGGTGGCGC GAGAGCGgccaaggcggggtccccggggcggggggctggaCAGGCAGTGC CAAGAGAgaggccaccgcctccgcggcTGCGACTGAGTCGGGGAGTGCCA CGAACAGGCTAGGGCAGAACTGTGCCGGGGGAAGCGCCATCGTTTACTGC TGGAAGCGTGAGACATGCGAAGAGCTGGCCCGCGCgctggaagggcgggg cctCTCTGCGCTTGCCTACCACGGGAAGCTGCCGGAcgcgcggcggcggc acgTGCAAGCCATGttcgtggaggggggggtacAGGTGGTTGCGGCCACG CTTGCCTTCGGGATGGGCATCGACAAAGCCGATGTGCGGGTGGTGGCCCA TTGGAACatccctccctccttggagGCCTTCTACCAAGAGAGCGGGCGGG CTGGGCGGGACGGGGGAcctgccctctctctcctcttctactGCCCTCGG GACGCGGAGGGTCGGTTCCACATGCTGCACAAGGAGTTGGAAGGCcacgg ggaggcagggagagagaagcagCAGGCAGTGGAACGAAAGAAGGAGCAAC TGGACAGCCGAGGGGGCTGAATGATAGCGGATTCCACATCAGTGAAAGGT TCACCTGACAATGAACTTGATGCGCGGATTGTTGAGGTCTTGCGCATCGC CTTCGGGCTCCAGACATTCCGTCAACCGCAAAAGGATGTCATCAAGCATG TCCTTCAAGGAGGATCTGGCCTAGTGCTTCTTCccacagggggagggaag agcctATGTTACCAACTGCCTGCGCTCCTCCTGGACGGGGTCACTGTCGT TGTGTCTCCTCTGATCGCGCTCATGAACGACCAGGTTACCGCCCTGAGAA AAAAGGGTATAGACGCCCGCTactgcagctcctccctgGATCCCTATCTC AACAAAGACATCCTCGACGACCTTCGTCTTCGACCGGAGCCCCGCGTCAA GCTCCTGTACGTGACCCCAGAGCGCCtgaccaccccctccttccttcccg tcctccaacaGCTCCACGCCCGCAAACTCCTCGCTGCTCTCATCGTCGAC GAGGCACACTGCATCTCTCAGTGGGGCCACGATTTTCGGCCGTCGTACAG GCGCTTGGAAGAAGTGcgcgccctcttcccctccctgccctgctTGGGGC TCacggccaccgccacccccaGGGTCCAACGGGACATCGTCTCCacgctc cgcctccctccctcgcacgTCTTCCGCAAATCCTTcgaccgcccctccct cttttacCGGGTCGAGTAcaagcccctccttcccgacgctcaggaggtgc tggccacTGCCATCAAGCAAGCCATCGGGTGGCGCGAGAGCGgccaaggc ggggtccccggggcggggggctggaCAGGCAGTGCCAAGAGAgaggccac cgcctccgcggcTGCGACTGAGTCGGGGAGTGCCACGAACAGGCTAGGGC AGAACTGTGCCGGGGGAAGCGCCATCGTTTACTGCTGGAAGCGTGAGACA TGCGAAGAGCTGGCCCGCGCgctggaagggcggggcctCTCTGCGCTTGC CTACCACGGGAAGCTGCCGGAcgcgcggcggcggcacgTGCAAGCCATGt tcgtggaggggggggtacAGGTGGTTGCGGCCACGCTTGCCTTCGGGATG GGCATCGACAAAGCCGATGTGCGGGTGGTGGCCCATTGGAACatccctcc ctccttggagGCCTTCTACCAAGAGAGCGGGCGGGCTGGGCGGGACGGGG GAcctgccctctctctcctcttctactGCCCTCGGGACGCGGAGGGTCGG TTCCACATGCTGCACAAGGAGTTGGAAGGCcacggggaggcagggagaga gaagcagCAGGCAGTGGAACGAAAGAAGGAGCAACTGGACAGCCGAGGGG GCTGAATGATAGCGGATTCCACATCAGTGAAAGGTTCACCTGACAATGAA CTTGATGCGCGGATTGTTGAGGTCTTGCGCATCGCCTTCGGGCTCCAGAC ATTCCGTCAACCGCAAAAGGATGTCATCAAGCATGTCCTTCAAGGAGGAT CTGGCCTAGTGCTTCTTCccacagggggagggaagagcctATGTTACCAA CTGCCTGCGCTCCTCCTGGACGGGGTCACTGTCGTTGTGTCTCCTCTGAT CGCGCTCATGAACGACCAGGTTACCGCCCTGAGAAAAAAGGGTATAGACG CCCGCTactgcagctcctccctgGATCCCTATCTCAACAAAGACATCCTC GACGACCTTCGTCTTCGACCGGAGCCCCGCGTCAAGCTCCTGTACGTGAC CCCAGAGCGCCtgaccaccccctccttccttcccgtcctccaacaGCTCC ACGCCCGCAAACTCCTCGCTGCTCTCATCGTCGACGAGGCACACTGCATC TCTCAGTGGGGCCACGATTTTCGGCCGTCGTACAGGCGCTTGGAAGAAGT GcgcgccctcttcccctccctgccctgctTGGGGCTCacggccaccgcca cccccaGGGTCCAACGGGACATCGTCTCCacgctccgcctccctccctcg cacgTCTTCCGCAAATCCTTcgaccgcccctccctcttttacCGGGTCGA GTAcaagcccctccttcccgacgctcaggaggtgctggccacTGCCATCA AGCAAGCCATCGGGTGGCGCGAGAGCGgccaaggcggggtccccggggcg gggggctggaCAGGCAGTGCCAAGAGAgaggccaccgcctccgcggcTGC GACTGAGTCGGGGAGTGCCACGAACAGGCTAGGGCAGAACTGTGCCGGGG GAAGCGCCATCGTTTACTGCTGGAAGCGTGAGACATGCGAAGAGCTGGCC CGCGCgctggaagggcggggcctCTCTGCGCTTGCCTACCACGGGAAGCT GCCGGAcgcgcggcggcggcacgTGCAAGCCATGttcgtggagggggggg tacAGGTGGTTGCGGCCACGCTTGCCTTCGGGATGGGCATCGACAAAGCC GATGTGCGGGTGGTGGCCCATTGGAACatccctccctccttggagGCCTT CTACCAAGAGAGCGGGCGGGCTGGGCGGGACGGGGGAcctgccctctctc tcctcttctactGCCCTCGGGACGCGGAGGGTCGGTTCCACATGCTGCAC AAGGAGTTGGAAGGCcacggggaggcagggagagagaagcagCAGGCAGT GGAACGAAAGAAGGAGCAACTGGACAGCCGAGGGGGCTGAATGATAGCGG ATTCCACATCAGTGAAAGGTTCACCTGACAATGAACTTGATGCGCGGATT GTTGAGGTCTTGCGCATCGCCTTCGGGCTCCAGACATTCCGTCAACCGCA AAAGGATGTCATCAAGCATGTCCTTCAAGGAGGATCTGGCCTAGTGCTTC TTCccacagggggagggaagagcctATGTTACCAACTGCCTGCGCTCCTC CTGGACGGGGTCACTGTCGTTGTGTCTCCTCTGATCGCGCTCATGAACGA CCAGGTTACCGCCCTGAGAAAAAAGGGTATAGACGCCCGCTactgcagct cctccctgGATCCCTATCTCAACAAAGACATCCTCGACGACCTTCGTCTT CGACCGGAGCCCCGCGTCAAGCTCCTGTACGTGACCCCAGAGCGCCtgac caccccctccttccttcccgtcctccaacaGCTCCACGCCCGCAAACTCC TCGCTGCTCTCATCGTCGACGAGGCACACTGCATCTCTCAGTGGGGCCAC GATTTTCGGCCGTCGTACAGGCGCTTGGAAGAAGTGcgcgccctcttccc ctccctgccctgctTGGGGCTCacggccaccgccacccccaGGGTCCAAC GGGACATCGTCTCCacgctccgcctccctccctcgcacgTCTTCCGCAAA TCCTTcgaccgcccctccctcttttacCGGGTCGAGTAcaagcccctcct tcccgacgctcaggaggtgctggccacTGCCATCAAGCAAGCCATCGGGT GGCGCGAGAGCGgccaaggcggggtccccggggcggggggctggaCAGGC AGTGCCAAGAGAgaggccaccgcctccgcggcTGCGACTGAGTCGGGGAG TGCCACGAACAGGCTAGGGCAGAACTGTGCCGGGGGAAGCGCCATCGTTT ACTGCTGGAAGCGTGAGACATGCGAAGAGCTGGCCCGCGCgctggaaggg cggggcctCTCTGCGCTTGCCTACCACGGGAAGCTGCCGGAcgcgcggcg gcggcacgTGCAAGCCATGttcgtggaggggggggtacAGGTGGTTGCGG CCACGCTTGCCTTCGGGATGGGCATCGACAAAGCCGATGTGCGGGTGGTG GCCCATTGGAACatccctccctccttggagGCCTTCTACCAAGAGAGCGG GCGGGCTGGGCGGGACGGGGGAcctgccctctctctcctcttctactGCC CTCGGGACGCGGAGGGTCGGTTCCACATGCTGCACAAGGAGTTGGAAGGC cacggggaggcagggagagagaagcagCAGGCAGTGGAACGAAAGAAGGA GCAACTGGACAGCCGAGGGGGCTGA back to top
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