EWM25427.1, cds5306 (CDS) Nannochloropsis gaditana

Overview
NameEWM25427.1
Unique Namecds5306
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002465.1:700962..701075 +
Alignment locationCM002465.1:701315..701972 +
Alignment locationCM002465.1:702102..702451 +
Alignment locationCM002465.1:702590..702790 +
Alignment locationCM002465.1:703416..703427 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM25427.1
Productatp-dependent dna helicase q3
Orig transcript idgnl|cribi|Naga_100005g115.6721.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002465.1supercontigCM002465.1:700962..701075 +
CM002465.1supercontigCM002465.1:701315..701972 +
CM002465.1supercontigCM002465.1:702102..702451 +
CM002465.1supercontigCM002465.1:702590..702790 +
CM002465.1supercontigCM002465.1:703416..703427 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
GO:0000166nucleotide binding
GO:0003676nucleic acid binding
GO:0005524ATP binding
GO:0008026ATP-dependent helicase activity
Vocabulary: Biological Process
TermDefinition
GO:0006259DNA metabolic process
GO:0006310DNA recombination
Vocabulary: INTERPRO
TermDefinition
IPR002464DNA/RNA_helicase_DEAH_CS
IPR027417P-loop_NTPase
IPR011545DEAD/DEAH_box_helicase_dom
IPR004589DNA_helicase_ATP-dep_RecQ
IPR001650Helicase_C
IPR014001Helicase_ATP-bd
Homology
BLAST of EWM25427.1 vs. NCBI_GenBank
Match: gi|585107188|gb|EWM25427.1| (atp-dependent dna helicase q3 [Nannochloropsis gaditana])

HSP 1 Score: 905.205 bits (2338), Expect = 0.000e+0
Identity = 444/444 (100.00%), Postives = 444/444 (100.00%), Query Frame = 0
Query:    1 MIADSTSVKGSPDNELDARIVEVLRIAFGLQTFRQPQKDVIKHVLQGGSGLVLLPTGGGKSLCYQLPALLLDGVTVVVSPLIALMNDQVTALRKKGIDARYCSSSLDPYLNKDILDDLRLRPEPRVKLLYVTPERLTTPSFLPVLQQLHARKLLAALIVDEAHCISQWGHDFRPSYRRLEEVRALFPSLPCLGLTATATPRVQRDIVSTLRLPPSHVFRKSFDRPSLFYRVEYKPLLPDAQEVLATAIKQAIGWRESGQGGVPGAGGWTGSAKREATASAAATESGSATNRLGQNCAGGSAIVYCWKRETCEELARALEGRGLSALAYHGKLPDARRRHVQAMFVEGGVQVVAATLAFGMGIDKADVRVVAHWNIPPSLEAFYQESGRAGRDGGPALSLLFYCPRDAEGRFHMLHKELEGHGEAGREKQQAVERKKEQLDSRGG 444
            MIADSTSVKGSPDNELDARIVEVLRIAFGLQTFRQPQKDVIKHVLQGGSGLVLLPTGGGKSLCYQLPALLLDGVTVVVSPLIALMNDQVTALRKKGIDARYCSSSLDPYLNKDILDDLRLRPEPRVKLLYVTPERLTTPSFLPVLQQLHARKLLAALIVDEAHCISQWGHDFRPSYRRLEEVRALFPSLPCLGLTATATPRVQRDIVSTLRLPPSHVFRKSFDRPSLFYRVEYKPLLPDAQEVLATAIKQAIGWRESGQGGVPGAGGWTGSAKREATASAAATESGSATNRLGQNCAGGSAIVYCWKRETCEELARALEGRGLSALAYHGKLPDARRRHVQAMFVEGGVQVVAATLAFGMGIDKADVRVVAHWNIPPSLEAFYQESGRAGRDGGPALSLLFYCPRDAEGRFHMLHKELEGHGEAGREKQQAVERKKEQLDSRGG
Sbjct:    1 MIADSTSVKGSPDNELDARIVEVLRIAFGLQTFRQPQKDVIKHVLQGGSGLVLLPTGGGKSLCYQLPALLLDGVTVVVSPLIALMNDQVTALRKKGIDARYCSSSLDPYLNKDILDDLRLRPEPRVKLLYVTPERLTTPSFLPVLQQLHARKLLAALIVDEAHCISQWGHDFRPSYRRLEEVRALFPSLPCLGLTATATPRVQRDIVSTLRLPPSHVFRKSFDRPSLFYRVEYKPLLPDAQEVLATAIKQAIGWRESGQGGVPGAGGWTGSAKREATASAAATESGSATNRLGQNCAGGSAIVYCWKRETCEELARALEGRGLSALAYHGKLPDARRRHVQAMFVEGGVQVVAATLAFGMGIDKADVRVVAHWNIPPSLEAFYQESGRAGRDGGPALSLLFYCPRDAEGRFHMLHKELEGHGEAGREKQQAVERKKEQLDSRGG 444          
BLAST of EWM25427.1 vs. NCBI_GenBank
Match: gi|1032646837|gb|OAQ28142.1| (ATP-dependent DNA helicase [Mortierella elongata AG-77])

HSP 1 Score: 306.22 bits (783), Expect = 3.495e-92
Identity = 179/450 (39.78%), Postives = 251/450 (55.78%), Query Frame = 0
Query:   22 EVLRIAFGLQTFRQPQKDVIKHVLQGGSGLVLLPTGGGKSLCYQLPALLLDGVTVVVSPLIALMNDQVTALRKKGIDARYCSSSLDPYLNKDILDDLRLRPEPRVKLLYVTPERLTTPSFLPVLQQLHARKLLAALIVDEAHCISQWGHDFRPSYRRLEEVRALFPSLPCLGLTATATPRVQRDIVSTLRLPPS---HVFRKSFDRPSLFYRV-----EYKPLLPDAQEVLATAIKQAIGWRESGQGGVPGAGGWTGSAKREATASAAATESGSATNRLGQNCAGGSAIVYCWKRETCEELARALEGRGLSALAYHGKLPDARRRHVQAMF----------------------VEGGVQVVAATLAFGMGIDKADVRVVAHWNIPPSLEAFYQESGRAGRDGGPALSLLFYCPRDAEGRFHMLHKELEGHGEAGREKQQAVERKKEQLDS 441
            + LR  FGL+ FR  Q+ +++  L+    +V++PTGGGKSLCYQLPA++  GVT+VVSPL+AL++DQV AL + GI A   +SS+       +L DL L  EP  KLLYVTPE L T  F   +  L+ R++LA L++DEAHCIS+WGHDFR  Y++L+  R  FP LP   LTATAT +V++DI STL LP       F  SF+R +L+Y V      Y   L   + V  T +K+     E+ +  +P A         + T++   T +        Q       I+YC +R TC++LA  L+G G+SA A+H  +   +R  VQ  +                      +   + V+ AT+AFGMGIDKA+VR V HW IP ++E FYQESGRAGRDG  +  +L+Y   D      +L  E E   +   +  +A +RKK   D+
Sbjct:   47 KCLRTVFGLKEFRGQQEAIVQASLEERDMMVIMPTGGGKSLCYQLPAVMSKGVTIVVSPLLALIHDQVIALLRLGIKAAALNSSIGKTERTKVLRDLAL-SEPTTKLLYVTPELLATTEFRKYISALYGREMLARLVIDEAHCISEWGHDFRKDYKKLDYFRKTFPKLPIAALTATATEKVRQDIKSTLGLPEPPKLSFFMTSFNRDNLYYEVRFDTDRYDNFLSFMKGVYKTRMKRLQAATET-KNKLPPA---------QFTSARTYTPTEPPKPLAEQKIEPVCGIIYCGQRATCDDLASRLKGDGISAAAFHSGMTPKQRAEVQQRWCLESPADDPKKKNGSSSTTPAVIGKPIDVIVATIAFGMGIDKANVRFVCHWEIPKTVEGFYQESGRAGRDGALSRCILYYSREDKSKIEFLLAVEAERQKQKATKAGEAPQRKKSLQDT 485          
BLAST of EWM25427.1 vs. NCBI_GenBank
Match: gi|551647008|ref|XP_005826289.1| (hypothetical protein GUITHDRAFT_76434 [Guillardia theta CCMP2712] >gi|428170384|gb|EKX39309.1| hypothetical protein GUITHDRAFT_76434 [Guillardia theta CCMP2712])

HSP 1 Score: 294.664 bits (753), Expect = 3.571e-92
Identity = 167/420 (39.76%), Postives = 243/420 (57.86%), Query Frame = 0
Query:   15 ELDARIVEVLRIAFGLQTFRQPQKDVIKHVLQGGSGLVLLPTGGGKSLCYQLPALLLDG-VTVVVSPLIALMNDQVTALRKKGIDARYCSSSLDPYLNKDILDDLRLRPEP---------RVKLLYVTPERLTTPSFLPVLQQLHARKLLAALIVDEAHCISQWGHDFRPSYRRLEEVRALFPSLPCLGLTATATPRVQRDIVSTLRLPPSHVFRKSFDRPSLFYRVEYKPLLPDAQEV---LATAIKQAIGWRESGQGGVPGAGGWTGSAKREATASAAATESGSATNRLGQNCAGGSAIVYCWKRETCEELARALEGRGLSALAYHGKLPDARRRHVQAMFVEGGVQVVAATLAFGMGIDKADVRVVAHWNIPPSLEAFYQESGRAGRDGGPALSLLFYCPRDAEGRFHMLHKELEGH 421
            E D +I  +L   FG  + R  QK VI  VL G     ++PTG GKSLCYQLPA+  +  VT+VV+PL+ALM  QV +L+ KG+ A    SS      + +++DL  +P P          ++LLYVTPE L T +F   L  L+    +  + +DEAHC+S+WGH+FRP +R+L  +   FPS+P L LTATAT +V+RD+V+ L++    +F +SFDRP++ Y+V YK L+ + ++V   +A+ + +++     G+   P A G                        L   C+G   I+YC  + +C+ LA+ L   G+ A AYH  L    R  VQ  ++EG  +VV AT+AFGMGIDK DVR V H ++P SLEA+YQE+GRAGRDGG + +L+++   DA     +L K +E  
Sbjct:   28 ERDIKIDRILHQVFGFTSLRGHQKRVISEVLDGKDAFAVMPTGAGKSLCYQLPAVYAESKVTLVVTPLLALMLGQVKSLQSKGVLASAIYSSQSKRDRERVINDLLGKPSPDSEPLTFPPMMRLLYVTPELLCTSNFQQDLSILYDGGYINLIAIDEAHCVSEWGHEFRPCFRKLGSIHQRFPSVPWLALTATATEQVRRDVVNILKIKVDKIFMQSFDRPNIRYQVRYKDLIGEDEQVFEDIASFVGESLNSLPRGE---PVAAG------------------------LQYACSG---IIYCHTKASCDALAQQLSAIGVKAKAYHAGLRPRERMQVQDEWMEGVTKVVCATIAFGMGIDKKDVRFVIHQSMPKSLEAYYQETGRAGRDGGESEALMYFSEDDANLHRFLLRKSVENQ 417          
BLAST of EWM25427.1 vs. NCBI_GenBank
Match: gi|562832900|ref|XP_006145874.1| (PREDICTED: ATP-dependent DNA helicase Q5 isoform X2 [Tupaia chinensis])

HSP 1 Score: 302.368 bits (773), Expect = 1.308e-91
Identity = 174/403 (43.18%), Postives = 231/403 (57.32%), Query Frame = 0
Query:   19 RIVEVLRIAFGLQTFRQP-QKDVIKHVLQGGSGL-VLLPTGGGKSLCYQLPALLLDGVTVVVSPLIALMNDQVTALRKKGIDARYCSSSLDPYLNKDILDDLRLRPEPRVKLLYVTPERLTTPSFLPVLQQLHARKLLAALIVDEAHCISQWGHDFRPSYRRLEEVRALFPSLPCLGLTATATPRVQRDIVSTLRLP-PSHVFRKSFDRPSLFYRVEYKPLLPDAQEVLATAIKQAIGWRESGQGGVPGAGGWTGSAKREATASAAATESGSATNRLGQNCAGGSAIVYCWKRETCEELARALEGRGLSALAYHGKLPDARRRHVQAMFVEGGVQVVAATLAFGMGIDKADVRVVAHWNIPPSLEAFYQESGRAGRDGGPALSLLFYCPRDAEGRFHMLHKEL 418
            ++   L+  FG  +F+ P Q+     V++G   + V +PTG GKSLCYQLPALL  G+T+VVSPLIAL+ DQV  L    +     +S L     K++L DL  + +PR KLLY+TPE   + SF P L  L +R LL+ L+VDEAHC+SQWGHDFRP Y RL  +R+     PC+ LTATATP+VQ D+ + L L  P   F+    R +LFY V++K L+ D    L     +A+G +                          A E GS           G  IVYC  RE CE+LA  L  RG+SA AYH  L  A R  VQ+ ++E  V V+ AT++FGMG+DKA+VR VAHWNI  S+  +YQESGRAGRDG P+   L+Y   D +    ++ KE+
Sbjct:   15 QVRSTLKKVFGFDSFKTPLQERATMAVVRGDKDVFVCMPTGAGKSLCYQLPALLAKGITIVVSPLIALIQDQVDHLLALKVPVSSLNSKLSAQERKELLCDLE-QDKPRTKLLYITPEMAASASFQPTLNSLLSRHLLSYLVVDEAHCVSQWGHDFRPDYLRLGVLRSRLGHTPCVALTATATPQVQEDVFAALHLKQPVATFKTPCFRANLFYDVQFKELISDPYGNLRDFCLKALGQK--------------------------ADEGGS-----------GCGIVYCRTREACEQLAIELSCRGVSAKAYHAGLKAAERTLVQSEWMEERVPVIVATISFGMGVDKANVRFVAHWNIAKSMAGYYQESGRAGRDGKPSWCRLYYSRNDRDQVSFLIKKEI 379          
BLAST of EWM25427.1 vs. NCBI_GenBank
Match: gi|1025476421|ref|XP_016517349.1| (PREDICTED: ATP-dependent DNA helicase Q5 isoform X3 [Poecilia formosa])

HSP 1 Score: 306.22 bits (783), Expect = 5.042e-91
Identity = 176/405 (43.46%), Postives = 234/405 (57.78%), Query Frame = 0
Query:   16 LDARIVEVLRIAFGLQTFRQP-QKDVIKHVLQGGSGL-VLLPTGGGKSLCYQLPALLLDGVTVVVSPLIALMNDQVTALRKKGIDARYCSSSLDPYLNKDILDDLRLRPEPRVKLLYVTPERLTTPSFLPVLQQLHARKLLAALIVDEAHCISQWGHDFRPSYRRLEEVRALFPSLPCLGLTATATPRVQRDIVSTLRLPPSHVFRKSFDRPSLFYRVEYKPLLPDAQEVLATAIKQAIGWRESGQGGVPGAGGWTGSAKREATASAAATESGSATNRLGQNCAGGSAIVYCWKRETCEELARALEGRGLSALAYHGKLPDARRRHVQAMFVEGGVQVVAATLAFGMGIDKADVRVVAHWNIPPSLEAFYQESGRAGRDGGPALSLLFYCPRDAEGRFHMLHKEL 418
            +   + + L+  FG   FR   Q+DV+K V+ G   + V +PTG GKSLCYQLPA+L +G+T+V+SPLIAL+ DQV  L++  I A   +S L     + IL DL  +  P++KLLY+TPE + +PSF P L  L +R LL+ L VDEAHC+SQWGHDFRP Y +L E+RA  P +PCL LTATA   VQ DIV +LRL     F     R +L Y V ++ LLP+    L   IK+A+                             A  SGSA          G  IVYC  R+ CE +A  L   G+ A AYH  +  A R   Q  +++G V V+ AT++FGMG+DKA+VR VAHWN+  SL  FYQESGRAGRDG P+L   +Y  +D E    ++ +E+
Sbjct:    1 MSTSLKQALKSHFGFDGFRSKLQEDVVKAVVSGQRDVFVCMPTGAGKSLCYQLPAVLAEGITLVISPLIALIQDQVDHLKELNIAACSINSKLPVGERRLILADLGSK-RPKLKLLYITPEMVASPSFQPCLTGLCSRGLLSYLAVDEAHCVSQWGHDFRPDYLKLGELRARIPGVPCLALTATAPKNVQEDIVQSLRLRCPMSFVTPVFRSNLHYDVIFRDLLPNPYAHLHAFIKKAL-----------------------------AMHSGSAEQ--------GCGIVYCRTRDGCETVAYQLNKLGVVAKAYHAGMKAADRTAAQNEWMQGKVLVIVATISFGMGVDKANVRFVAHWNLAKSLAGFYQESGRAGRDGLPSLCRTYYSRKDKEQLHFLIRQEV 367          
BLAST of EWM25427.1 vs. NCBI_GenBank
Match: gi|1025476423|ref|XP_016517350.1| (PREDICTED: ATP-dependent DNA helicase Q5 isoform X4 [Poecilia formosa])

HSP 1 Score: 305.834 bits (782), Expect = 5.443e-91
Identity = 176/405 (43.46%), Postives = 234/405 (57.78%), Query Frame = 0
Query:   16 LDARIVEVLRIAFGLQTFRQP-QKDVIKHVLQGGSGL-VLLPTGGGKSLCYQLPALLLDGVTVVVSPLIALMNDQVTALRKKGIDARYCSSSLDPYLNKDILDDLRLRPEPRVKLLYVTPERLTTPSFLPVLQQLHARKLLAALIVDEAHCISQWGHDFRPSYRRLEEVRALFPSLPCLGLTATATPRVQRDIVSTLRLPPSHVFRKSFDRPSLFYRVEYKPLLPDAQEVLATAIKQAIGWRESGQGGVPGAGGWTGSAKREATASAAATESGSATNRLGQNCAGGSAIVYCWKRETCEELARALEGRGLSALAYHGKLPDARRRHVQAMFVEGGVQVVAATLAFGMGIDKADVRVVAHWNIPPSLEAFYQESGRAGRDGGPALSLLFYCPRDAEGRFHMLHKEL 418
            +   + + L+  FG   FR   Q+DV+K V+ G   + V +PTG GKSLCYQLPA+L +G+T+V+SPLIAL+ DQV  L++  I A   +S L     + IL DL  +  P++KLLY+TPE + +PSF P L  L +R LL+ L VDEAHC+SQWGHDFRP Y +L E+RA  P +PCL LTATA   VQ DIV +LRL     F     R +L Y V ++ LLP+    L   IK+A+                             A  SGSA          G  IVYC  R+ CE +A  L   G+ A AYH  +  A R   Q  +++G V V+ AT++FGMG+DKA+VR VAHWN+  SL  FYQESGRAGRDG P+L   +Y  +D E    ++ +E+
Sbjct:    1 MSTSLKQALKSHFGFDGFRSKLQEDVVKAVVSGQRDVFVCMPTGAGKSLCYQLPAVLAEGITLVISPLIALIQDQVDHLKELNIAACSINSKLPVGERRLILADLGSK-RPKLKLLYITPEMVASPSFQPCLTGLCSRGLLSYLAVDEAHCVSQWGHDFRPDYLKLGELRARIPGVPCLALTATAPKNVQEDIVQSLRLRCPMSFVTPVFRSNLHYDVIFRDLLPNPYAHLHAFIKKAL-----------------------------AMHSGSAEQ--------GCGIVYCRTRDGCETVAYQLNKLGVVAKAYHAGMKAADRTAAQNEWMQGKVLVIVATISFGMGVDKANVRFVAHWNLAKSLAGFYQESGRAGRDGLPSLCRTYYSRKDKEQLHFLIRQEV 367          
BLAST of EWM25427.1 vs. NCBI_GenBank
Match: gi|1069857368|ref|XP_018227411.1| (hypothetical protein T552_00527 [Pneumocystis carinii B80] >gi|968586139|gb|KTW30815.1| hypothetical protein T552_00527 [Pneumocystis carinii B80])

HSP 1 Score: 299.286 bits (765), Expect = 6.575e-91
Identity = 160/401 (39.90%), Postives = 232/401 (57.86%), Query Frame = 0
Query:   23 VLRIAFGLQTFRQPQKDVIKHVLQGGSGLVLLPTGGGKSLCYQLPALLLD-GVTVVVSPLIALMNDQVTALRKKGIDARYCSSSLDPYLNKDILDDLRLRPEPRVKLLYVTPERLTTPSFLPVLQQLHARKLLAALIVDEAHCISQWGHDFRPSYRRLEEVRALFPSLPCLGLTATATPRVQRDIVSTLRLPPS---HVFRKSFDRPSLFYRVEYKPLLPDAQEVLATAIKQAIGWRESGQGGVPGAGGWTGSAKREATASAAATESGSATNRLGQNCAGGSAIVYCWKRETCEELARALEGRGLSALAYHGKLPDARRRHVQAMFVEGGVQVVAATLAFGMGIDKADVRVVAHWNIPPSLEAFYQESGRAGRDGGPALSLLFYCPRDAEGRFHMLHKELE 419
             LR  FG   FR  QK+ I+  L+G    ++ PTG GKSLCYQLPA++ D GVT+VVSPL+ALMN+QV  LR K + A   +S+      + IL+DL     P+V+LLYVTPE L+T SF   L  ++    L   ++DEAHC+S+WGHDFR  Y+ L  +R  +P +P + LTATAT +V+ D+V  L LPP     VF ++F R +L + V Y+    D  E     I                   +T   KR +  +       ++   L  +  G   I+Y  KR+TCEE+A+ L+  G++A +YH  L    R  +  ++ EG + ++ AT+AFGMG+DK DVR V HW++  S+EA+YQE+GRAGRD   +  +L+Y   D +   ++LH+E+E
Sbjct:   16 TLRKVFGKSEFRGCQKEAIESALKGEDIFIIAPTGMGKSLCYQLPAIVADHGVTIVVSPLLALMNNQVDILRAKKLPAATLNSTTSKENRRRILEDLAC-GHPQVRLLYVTPELLSTESFRKDLLNVYQHGELHRFVIDEAHCVSEWGHDFRKDYKLLSFLRKKYPKIPIMALTATATEKVRLDVVKILGLPPPPILKVFIETFSRKNLHFEVRYRSEKHDHYEDFQKFI----------------LSVYTRKKKRLSLMNGNHKNDINSNKNLFVSICG---IIYAKKRDTCEEVAKRLKSDGINAQSYHAGLSPTTRDRIMKLWCEGKIDIIVATIAFGMGVDKEDVRFVVHWDMSKSMEAYYQEAGRAGRDNKTSRCILYYSREDRDRTRYILHQEIE 396          
BLAST of EWM25427.1 vs. NCBI_GenBank
Match: gi|1025476419|ref|XP_016517348.1| (PREDICTED: ATP-dependent DNA helicase Q5 isoform X2 [Poecilia formosa])

HSP 1 Score: 305.834 bits (782), Expect = 6.735e-91
Identity = 176/405 (43.46%), Postives = 234/405 (57.78%), Query Frame = 0
Query:   16 LDARIVEVLRIAFGLQTFRQP-QKDVIKHVLQGGSGL-VLLPTGGGKSLCYQLPALLLDGVTVVVSPLIALMNDQVTALRKKGIDARYCSSSLDPYLNKDILDDLRLRPEPRVKLLYVTPERLTTPSFLPVLQQLHARKLLAALIVDEAHCISQWGHDFRPSYRRLEEVRALFPSLPCLGLTATATPRVQRDIVSTLRLPPSHVFRKSFDRPSLFYRVEYKPLLPDAQEVLATAIKQAIGWRESGQGGVPGAGGWTGSAKREATASAAATESGSATNRLGQNCAGGSAIVYCWKRETCEELARALEGRGLSALAYHGKLPDARRRHVQAMFVEGGVQVVAATLAFGMGIDKADVRVVAHWNIPPSLEAFYQESGRAGRDGGPALSLLFYCPRDAEGRFHMLHKEL 418
            +   + + L+  FG   FR   Q+DV+K V+ G   + V +PTG GKSLCYQLPA+L +G+T+V+SPLIAL+ DQV  L++  I A   +S L     + IL DL  +  P++KLLY+TPE + +PSF P L  L +R LL+ L VDEAHC+SQWGHDFRP Y +L E+RA  P +PCL LTATA   VQ DIV +LRL     F     R +L Y V ++ LLP+    L   IK+A+                             A  SGSA          G  IVYC  R+ CE +A  L   G+ A AYH  +  A R   Q  +++G V V+ AT++FGMG+DKA+VR VAHWN+  SL  FYQESGRAGRDG P+L   +Y  +D E    ++ +E+
Sbjct:    1 MSTSLKQALKSHFGFDGFRSKLQEDVVKAVVSGQRDVFVCMPTGAGKSLCYQLPAVLAEGITLVISPLIALIQDQVDHLKELNIAACSINSKLPVGERRLILADLGSK-RPKLKLLYITPEMVASPSFQPCLTGLCSRGLLSYLAVDEAHCVSQWGHDFRPDYLKLGELRARIPGVPCLALTATAPKNVQEDIVQSLRLRCPMSFVTPVFRSNLHYDVIFRDLLPNPYAHLHAFIKKAL-----------------------------AMHSGSAEQ--------GCGIVYCRTRDGCETVAYQLNKLGVVAKAYHAGMKAADRTAAQNEWMQGKVLVIVATISFGMGVDKANVRFVAHWNLAKSLAGFYQESGRAGRDGLPSLCRTYYSRKDKEQLHFLIRQEV 367          
BLAST of EWM25427.1 vs. NCBI_GenBank
Match: gi|617467646|ref|XP_007574266.1| (PREDICTED: ATP-dependent DNA helicase Q5 isoform X1 [Poecilia formosa])

HSP 1 Score: 305.449 bits (781), Expect = 9.311e-91
Identity = 176/405 (43.46%), Postives = 234/405 (57.78%), Query Frame = 0
Query:   16 LDARIVEVLRIAFGLQTFRQP-QKDVIKHVLQGGSGL-VLLPTGGGKSLCYQLPALLLDGVTVVVSPLIALMNDQVTALRKKGIDARYCSSSLDPYLNKDILDDLRLRPEPRVKLLYVTPERLTTPSFLPVLQQLHARKLLAALIVDEAHCISQWGHDFRPSYRRLEEVRALFPSLPCLGLTATATPRVQRDIVSTLRLPPSHVFRKSFDRPSLFYRVEYKPLLPDAQEVLATAIKQAIGWRESGQGGVPGAGGWTGSAKREATASAAATESGSATNRLGQNCAGGSAIVYCWKRETCEELARALEGRGLSALAYHGKLPDARRRHVQAMFVEGGVQVVAATLAFGMGIDKADVRVVAHWNIPPSLEAFYQESGRAGRDGGPALSLLFYCPRDAEGRFHMLHKEL 418
            +   + + L+  FG   FR   Q+DV+K V+ G   + V +PTG GKSLCYQLPA+L +G+T+V+SPLIAL+ DQV  L++  I A   +S L     + IL DL  +  P++KLLY+TPE + +PSF P L  L +R LL+ L VDEAHC+SQWGHDFRP Y +L E+RA  P +PCL LTATA   VQ DIV +LRL     F     R +L Y V ++ LLP+    L   IK+A+                             A  SGSA          G  IVYC  R+ CE +A  L   G+ A AYH  +  A R   Q  +++G V V+ AT++FGMG+DKA+VR VAHWN+  SL  FYQESGRAGRDG P+L   +Y  +D E    ++ +E+
Sbjct:    1 MSTSLKQALKSHFGFDGFRSKLQEDVVKAVVSGQRDVFVCMPTGAGKSLCYQLPAVLAEGITLVISPLIALIQDQVDHLKELNIAACSINSKLPVGERRLILADLGSK-RPKLKLLYITPEMVASPSFQPCLTGLCSRGLLSYLAVDEAHCVSQWGHDFRPDYLKLGELRARIPGVPCLALTATAPKNVQEDIVQSLRLRCPMSFVTPVFRSNLHYDVIFRDLLPNPYAHLHAFIKKAL-----------------------------AMHSGSAEQ--------GCGIVYCRTRDGCETVAYQLNKLGVVAKAYHAGMKAADRTAAQNEWMQGKVLVIVATISFGMGVDKANVRFVAHWNLAKSLAGFYQESGRAGRDGLPSLCRTYYSRKDKEQLHFLIRQEV 367          
BLAST of EWM25427.1 vs. NCBI_GenBank
Match: gi|961905462|ref|XP_014904276.1| (PREDICTED: ATP-dependent DNA helicase Q5 isoform X3 [Poecilia latipinna])

HSP 1 Score: 304.679 bits (779), Expect = 1.622e-90
Identity = 175/405 (43.21%), Postives = 234/405 (57.78%), Query Frame = 0
Query:   16 LDARIVEVLRIAFGLQTFRQP-QKDVIKHVLQGGSGL-VLLPTGGGKSLCYQLPALLLDGVTVVVSPLIALMNDQVTALRKKGIDARYCSSSLDPYLNKDILDDLRLRPEPRVKLLYVTPERLTTPSFLPVLQQLHARKLLAALIVDEAHCISQWGHDFRPSYRRLEEVRALFPSLPCLGLTATATPRVQRDIVSTLRLPPSHVFRKSFDRPSLFYRVEYKPLLPDAQEVLATAIKQAIGWRESGQGGVPGAGGWTGSAKREATASAAATESGSATNRLGQNCAGGSAIVYCWKRETCEELARALEGRGLSALAYHGKLPDARRRHVQAMFVEGGVQVVAATLAFGMGIDKADVRVVAHWNIPPSLEAFYQESGRAGRDGGPALSLLFYCPRDAEGRFHMLHKEL 418
            +   + + L+  FG   FR   Q+DV+K V+ G   + V +PTG GKSLCYQLPA+L +G+T+V+SPLIAL+ DQV  L++  I A   +S L     + IL DL  +  P++KLLY+TPE + +PSF P L  L +R LL+ L VDEAHC+SQWGHDFRP Y +L E+RA  P +PCL LTATA   VQ DI+ +LRL     F     R +L Y V ++ LLP+    L   IK+A+                             A  SGSA          G  IVYC  R+ CE +A  L   G+ A AYH  +  A R   Q  +++G V V+ AT++FGMG+DKA+VR VAHWN+  SL  FYQESGRAGRDG P+L   +Y  +D E    ++ +E+
Sbjct:    1 MSTSLKQALKSHFGFDGFRSKLQEDVVKAVVSGQRDVFVCMPTGAGKSLCYQLPAVLAEGITLVISPLIALIQDQVDHLKELNIAACSINSKLPVGERRLILADLGSK-RPKLKLLYITPEMVASPSFQPCLTGLCSRGLLSYLAVDEAHCVSQWGHDFRPDYLKLGELRARIPGVPCLALTATAPKNVQEDILQSLRLRCPMSFVTPVFRSNLHYDVIFRDLLPNPYAHLHAFIKKAL-----------------------------AMHSGSAEQ--------GCGIVYCRTRDGCETVAYQLNKLGVVAKAYHAGMKAADRTAAQNEWMQGKVLVIVATISFGMGVDKANVRFVAHWNLAKSLAGFYQESGRAGRDGLPSLCRTYYSRKDKEQLHFLIRQEV 367          
The following BLAST results are available for this feature:
BLAST of EWM25427.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585107188|gb|EWM25427.1|0.000e+0100.00atp-dependent dna helicase q3 [Nannochloropsis gad... [more]
gi|1032646837|gb|OAQ28142.1|3.495e-9239.78ATP-dependent DNA helicase [Mortierella elongata A... [more]
gi|551647008|ref|XP_005826289.1|3.571e-9239.76hypothetical protein GUITHDRAFT_76434 [Guillardia ... [more]
gi|562832900|ref|XP_006145874.1|1.308e-9143.18PREDICTED: ATP-dependent DNA helicase Q5 isoform X... [more]
gi|1025476421|ref|XP_016517349.1|5.042e-9143.46PREDICTED: ATP-dependent DNA helicase Q5 isoform X... [more]
gi|1025476423|ref|XP_016517350.1|5.443e-9143.46PREDICTED: ATP-dependent DNA helicase Q5 isoform X... [more]
gi|1069857368|ref|XP_018227411.1|6.575e-9139.90hypothetical protein T552_00527 [Pneumocystis cari... [more]
gi|1025476419|ref|XP_016517348.1|6.735e-9143.46PREDICTED: ATP-dependent DNA helicase Q5 isoform X... [more]
gi|617467646|ref|XP_007574266.1|9.311e-9143.46PREDICTED: ATP-dependent DNA helicase Q5 isoform X... [more]
gi|961905462|ref|XP_014904276.1|1.622e-9043.21PREDICTED: ATP-dependent DNA helicase Q5 isoform X... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna5319rna5319Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications