|
|
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100005g87.6730.mrna |
| Orig protein id | gnl|cribi|Naga_100005g87.6730 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002465.1 | supercontig | CM002465.1:642851..645714 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna5294 ID=rna5294|Name=rna5294|organism=Nannochloropsis gaditana|type=mRNA|length=828bp
GACCGGATTGGGGCGCTTTGCTTTAATCAGAATGATCGGAAACCCAAGTC
TGTTATTCTTGTGTCTTTTACTCACGCTAGTGCGAAAATTTTCACACAAA
ATAAGGGTGGAAACTGCGTTCCATGTTGTCGCACACTGGATCATGCCGAC
GGTCAGCTCACCGCTTATTGGCAATGTGCTTTTCCAGTGCTCCACTTAAC
CGCGCGTCGTCAGCAGGTTTTCCCATCTCCTCGTCACTCTCACCCGGCGC
CGTATCATCTCCAGGGTGCTTTCGGGAGGAGCGCCTCAGCTTGCGGTTGT
CATGCCATCAGTTTTGTAGCACAAGCAGTTTGCAGCAGGGCGCCGAAGAC
GAAGCACAAGCCACCTCACCGGGGCCAAGTAATGCTAGAGTAAAGGAAGA
CGAAGGAGGGGTGATCATTGAAGTGGGAACCACATCGCAATCGGCAGTAA
AGAAGGACACTTGCGGTGAGGTAGAGGAGGCGGAAGACGAAATGGAGGAG
ATGTTTGTGATGGGTCCTTCCGGTCGCGTTGAATGGGGTGGCCCGACGCG
CGGAGGGAGACATAAGGAGCCCACACGATTTGGGGATTGGGAACGGAAGG
GGCGATGCACCGACTTCAGCTAGATAGGGGAGTGTATAGTACTTAAGTGC
ATGGGAATATAAAGATGGGAGGAGAGGTGGTGATCGTAAAACAAAGTGTA
AGTTGGAGATAGCATGAACCATACGGCCGCATGCAGGGAACAAAACTGTG
ACGCAGCACGCGAGCCTTTTGAGCTTTACGTTAGTGTCAGTATCTGCTTT
ACTCAAATGAAACCTGTGAAGTTCAGAG back to topprotein sequence of rna5294 >rna5294-protein ID=rna5294-protein|Name=rna5294|organism=Nannochloropsis gaditana|type=polypeptide|length=350bp
MFLKINLLCALTCIKVVIWQRTAMTWPTTENVRRRSLLLLLIALLAAMIV
KANDKARPFTRLQSTTGNVVDTHGQQLDHNEQQRNQETLDDRNGKERQQA
KRKRRLQQAASGFDQPLRPNDKVAFLQKIAKGNVDPLELFTRGVKSKAFQ
AVLKNVEIQHRILKEMPLLAAFDGFRQITGRRLSARETMEGFAIGVQNVI
DFAKVAFIKVKDPQQTAATIAKMAADPNPAIQSLFRRAQEGDPAAVEELQ
DVFNDLHFPGVDMRVLREVRRNHTFEKLLSMPEIMRFIDRNEFASNFFRS
DIKETFLKQDPRIIGTNANGIQIDTAATVGSDVVNVAGGTAEKATKGIVP back to topmRNA from alignment at CM002465.1:642851..645714- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna5294 ID=rna5294|Name=rna5294|organism=Nannochloropsis gaditana|type=mRNA|length=2864bp|location=Sequence derived from alignment at CM002465.1:642851..645714- (Nannochloropsis gaditana)
ATGTTCTTAAAAATAAATCTTCTGTGCGCCTTGACTTGTATAAAGTATGA
ATGAGAGGGATGCAATGTCAGCCCACGGTTCAAAAGGTGGTGTATTTGTT
GCTGGCGATTGTTTTTTTCAAAAGTTCTGTCAAATTTTAAATGTCAGGCT
ACTGAGAAATATAGATAGTAGATGAAGCTACCACGAGGAGTCAAGTGGGA
TCAGAACAAGGCGATCCCGCCTGACCTCCTTGGTCCGTCATAGCTTTCGT
GTGATCATGTTATGTACATGAACATTAATTTCGTCATCCTACATAGCTAT
ACGAGCTGTACATAATGACATCACATGGCTTTGGACCCTTCAAAGCATTA
GTCGTCATCAAGTGGGCTGTAAGCGTGTCTTTCACAAAACATCAAATTAG
CGTGTCTTACCGAAATCAACTGCTATCATGTGCCATTTTTCTGTCGCTGC
TTTCTTATTTCTTTCAAAATTCTTAGCACCCATTCCAAAAAATAATCCAA
AACTGGCCTTCACATCCATTAAATACTTTTAGCGGGGCATTCGCCCCAGT
CGCACTTTTGGTAATAAGTCTTGAACCCCCCAGCACGAATAACGGCTCGG
GACTACGTCCACTCAAATTTAAACGGTCTTCGCCACGCCGAGGAGACCAA
GTGGGACGGGTTCCTTGTCGTGCCAAGCACTTGCCTGAATGAGCCTCCAT
AGTCATGACAGCATGATCGAATAATTTTTATTTGACGAGTGAGAGGATGG
CTCCATTCAGATTTTGAAACGCCGATCGGCGGTAACATTCTTTTGCACTC
GATCATTTGACGGCGGGCCACGGCTTATCGTTCCATTAATTCACATGCAT
TTTTTTTATGATCTCACGGTTGATCCAGGGTTGTGATTTGGCAGCGTACA
GCAATGACATGGCCTACGACAGAGAATGTGCGCCGTAGGAGCTTGCTTCT
CCTGTTAATCGCCTTACTCGCAGCGATGATTGTGAAAGCAAATGATAAAG
CAAGACCATTTACCCGCCTTCAGTCAACAACGGGCAATGTTGTGGATACC
CATGGACAGCAACTTGACCATAACGAGCAACAAAGGAATCAAGAGACACT
TGATGATCGGAACGGAAAGGAAAGACAGCAAGCCAAGAGAAAGAGACGAC
TGCAGCAAGCAGCAAGCGGTTTTGATCGTGAGTAGTGGAGCTTTAGCTTT
GAAGCAGCCTTCCCCTCGGAAAAGTCTTTGCGACTTCGTCAATAACTAGA
TTGACGATCAGACTACGTGAGGCAAAGCGAAGAGAAGCAGGCACTGCAGA
GACGTTCGAGGAGGCATATTCTTGTCTGTGTGGGGTTTCTTTATCTCACA
TTTCTCCATCTTTATCCTCGGCAGTGCCTTTCTAAGAGTTTTTCTGTTGA
TGCAAGCCCCTAATAGAAGTTCTGTCGGTTTCTCGTCATATCCCTCATAC
ACACCCACAAGAGCCATTGCGGCCCAATGACAAGGTGGCTTTCCTGCAAA
AAATAGCGAAAGGCAATGTGGATCCTTTAGAGCTTTTCACCCGGGGGGTG
AAAAGCAAAGCTTTTCAGGCCGTATTAAAAAATGTTGAGATCCAACATCG
CATTTTGAAAGAGATGCCGCTCCTTGCTGCCTTCGACGGTTTCCGTCAGA
TTACTGGTCGGCGACTAAGCGCAAGAGAGGTGCGTAGGTCCTTGAAAGGA
GAGCAATGACGCATATAAATGGATTGTAGCCGATTATACAACCATTGAAT
TAGAGAGAAGCATCTGTGCAAATGCCAGGGTGACAATGAAGGTTCTTACT
TGGTGTGACATCAAGCCTTCTTGTTTGGTTTCAGCGAAGGGTTTCTCCTA
TGAAGACGGCAGAAAGCACCACCAAATTCAAGCCTGACATCTCGTAACCA
CTCATCATGCACCCGATTTCTTGGAAATAGACAATGGAGGGCTTCGCGAT
CGGGGTGCAGAACGTGATTGATTTTGCCAAAGTTGCTTTCATCAAGGTGA
AAGACCCTCAGCAAACAGCCGCAACAATAGCAAAGATGGCTGCAGATCCC
AACCCTGCCATTCAAAGCTTGTTTCGCCGGGCCCAGGAGGGGGATCCTGC
AGCGGTGGAAGAGCTGCAGGACGTGTTTAATGACCTACACTTTCCAGGTG
TTGATATGCGTGTTCTCCGGGAAGTCAGGCGGAACCATACCTTCGAAAAG
TTGTTGTCAATGCCAGAAATCATGCGCTTCATCGACCGGAACGAATTCGC
GTCAAACTTCTTCCGCTCCGACATCAAAGAAACATTTTTAAAACAGGATC
CAAGGATAATTGGAACAAATGCAAATGGAATTCAAATAGACACGGCGGCG
ACCGTAGGCTCCGACGTTGTGAATGTAGCAGGAGGGACAGCGGAAAAAGC
CACAAAGGGTATTGTACCTTGATTTCGCATGCCCTTTATGACAAGTTACA
GCCCTCGATCATGGACACGTTAAGAAGTCTGTACTCAAGGAGATAAGATC
CAGGAGAAAATATTGAAATAGAAAGGGATAAAGGAAAGCAATCAGACATA
AAAAGGATGACCGATAAGACATCAGCAAGGAATCTACCCGGGATTCTTGA
AATTGCGAGCGAGTAAAAATCCTTCAAGTGAGTTATACATTTTGTTTTAA
TCGACGGCCATCTTTGGAAATATTATAGCAGTACTATGCACGCTCATTCC
TGTCGACCATGGTCGTCGGCTTTGCTCCTTGTACATAACGCCTACCCAGA
TACCTGGCCATACCTGGAGTCGCCCAAAACACGACACCTCAGCAAACATT
GAATTCCGCTCCAGCATATAAAACATATAATATGAGTTCCAGAAAAGTAC
CACGCTGCCGCAGG back to topCoding sequence (CDS) from alignment at CM002465.1:642851..645714- >rna5294 ID=rna5294|Name=rna5294|organism=Nannochloropsis gaditana|type=CDS|length=4212bp|location=Sequence derived from alignment at CM002465.1:642851..645714- (Nannochloropsis gaditana)
ACAATGGAGGGCTTCGCGATCGGGGTGCAGAACGTGATTGATTTTGCCAA
AGTTGCTTTCATCAAGGTGAAAGACCCTCAGCAAACAGCCGCAACAATAG
CAAAGATGGCTGCAGATCCCAACCCTGCCATTCAAAGCTTGTTTCGCCGG
GCCCAGGAGGGGGATCCTGCAGCGGTGGAAGAGCTGCAGGACGTGTTTAA
TGACCTACACTTTCCAGGTGTTGATATGCGTGTTCTCCGGGAAGTCAGGC
GGAACCATACCTTCGAAAAGTTGTTGTCAATGCCAGAAATCATGCGCTTC
ATCGACCGGAACGAATTCGCGTCAAACTTCTTCCGCTCCGACATCAAAGA
AACATTTTTAAAACAGGATCCAAGGATAATTGGAACAAATGCAAATGGAA
TTCAAATAGACACGGCGGCGACCGTAGGCTCCGACGTTGTGAATGTAGCA
GGAGGGACAGCGGAAAAAGCCACAAAGGGTATTGTACCTTGAAGCCATTG
CGGCCCAATGACAAGGTGGCTTTCCTGCAAAAAATAGCGAAAGGCAATGT
GGATCCTTTAGAGCTTTTCACCCGGGGGGTGAAAAGCAAAGCTTTTCAGG
CCGTATTAAAAAATGTTGAGATCCAACATCGCATTTTGAAAGAGATGCCG
CTCCTTGCTGCCTTCGACGGTTTCCGTCAGATTACTGGTCGGCGACTAAG
CGCAAGAGAGGGTTGTGATTTGGCAGCGTACAGCAATGACATGGCCTACG
ACAGAGAATGTGCGCCGTAGGAGCTTGCTTCTCCTGTTAATCGCCTTACT
CGCAGCGATGATTGTGAAAGCAAATGATAAAGCAAGACCATTTACCCGCC
TTCAGTCAACAACGGGCAATGTTGTGGATACCCATGGACAGCAACTTGAC
CATAACGAGCAACAAAGGAATCAAGAGACACTTGATGATCGGAACGGAAA
GGAAAGACAGCAAGCCAAGAGAAAGAGACGACTGCAGCAAGCAGCAAGCG
GTTTTGATCATGTTCTTAAAAATAAATCTTCTGTGCGCCTTGACTTGTAT
AAAACAATGGAGGGCTTCGCGATCGGGGTGCAGAACGTGATTGATTTTGC
CAAAGTTGCTTTCATCAAGGTGAAAGACCCTCAGCAAACAGCCGCAACAA
TAGCAAAGATGGCTGCAGATCCCAACCCTGCCATTCAAAGCTTGTTTCGC
CGGGCCCAGGAGGGGGATCCTGCAGCGGTGGAAGAGCTGCAGGACGTGTT
TAATGACCTACACTTTCCAGGTGTTGATATGCGTGTTCTCCGGGAAGTCA
GGCGGAACCATACCTTCGAAAAGTTGTTGTCAATGCCAGAAATCATGCGC
TTCATCGACCGGAACGAATTCGCGTCAAACTTCTTCCGCTCCGACATCAA
AGAAACATTTTTAAAACAGGATCCAAGGATAATTGGAACAAATGCAAATG
GAATTCAAATAGACACGGCGGCGACCGTAGGCTCCGACGTTGTGAATGTA
GCAGGAGGGACAGCGGAAAAAGCCACAAAGGGTATTGTACCTTGAAGCCA
TTGCGGCCCAATGACAAGGTGGCTTTCCTGCAAAAAATAGCGAAAGGCAA
TGTGGATCCTTTAGAGCTTTTCACCCGGGGGGTGAAAAGCAAAGCTTTTC
AGGCCGTATTAAAAAATGTTGAGATCCAACATCGCATTTTGAAAGAGATG
CCGCTCCTTGCTGCCTTCGACGGTTTCCGTCAGATTACTGGTCGGCGACT
AAGCGCAAGAGAGGGTTGTGATTTGGCAGCGTACAGCAATGACATGGCCT
ACGACAGAGAATGTGCGCCGTAGGAGCTTGCTTCTCCTGTTAATCGCCTT
ACTCGCAGCGATGATTGTGAAAGCAAATGATAAAGCAAGACCATTTACCC
GCCTTCAGTCAACAACGGGCAATGTTGTGGATACCCATGGACAGCAACTT
GACCATAACGAGCAACAAAGGAATCAAGAGACACTTGATGATCGGAACGG
AAAGGAAAGACAGCAAGCCAAGAGAAAGAGACGACTGCAGCAAGCAGCAA
GCGGTTTTGATCATGTTCTTAAAAATAAATCTTCTGTGCGCCTTGACTTG
TATAAAACAATGGAGGGCTTCGCGATCGGGGTGCAGAACGTGATTGATTT
TGCCAAAGTTGCTTTCATCAAGGTGAAAGACCCTCAGCAAACAGCCGCAA
CAATAGCAAAGATGGCTGCAGATCCCAACCCTGCCATTCAAAGCTTGTTT
CGCCGGGCCCAGGAGGGGGATCCTGCAGCGGTGGAAGAGCTGCAGGACGT
GTTTAATGACCTACACTTTCCAGGTGTTGATATGCGTGTTCTCCGGGAAG
TCAGGCGGAACCATACCTTCGAAAAGTTGTTGTCAATGCCAGAAATCATG
CGCTTCATCGACCGGAACGAATTCGCGTCAAACTTCTTCCGCTCCGACAT
CAAAGAAACATTTTTAAAACAGGATCCAAGGATAATTGGAACAAATGCAA
ATGGAATTCAAATAGACACGGCGGCGACCGTAGGCTCCGACGTTGTGAAT
GTAGCAGGAGGGACAGCGGAAAAAGCCACAAAGGGTATTGTACCTTGAAG
CCATTGCGGCCCAATGACAAGGTGGCTTTCCTGCAAAAAATAGCGAAAGG
CAATGTGGATCCTTTAGAGCTTTTCACCCGGGGGGTGAAAAGCAAAGCTT
TTCAGGCCGTATTAAAAAATGTTGAGATCCAACATCGCATTTTGAAAGAG
ATGCCGCTCCTTGCTGCCTTCGACGGTTTCCGTCAGATTACTGGTCGGCG
ACTAAGCGCAAGAGAGGGTTGTGATTTGGCAGCGTACAGCAATGACATGG
CCTACGACAGAGAATGTGCGCCGTAGGAGCTTGCTTCTCCTGTTAATCGC
CTTACTCGCAGCGATGATTGTGAAAGCAAATGATAAAGCAAGACCATTTA
CCCGCCTTCAGTCAACAACGGGCAATGTTGTGGATACCCATGGACAGCAA
CTTGACCATAACGAGCAACAAAGGAATCAAGAGACACTTGATGATCGGAA
CGGAAAGGAAAGACAGCAAGCCAAGAGAAAGAGACGACTGCAGCAAGCAG
CAAGCGGTTTTGATCATGTTCTTAAAAATAAATCTTCTGTGCGCCTTGAC
TTGTATAAAACAATGGAGGGCTTCGCGATCGGGGTGCAGAACGTGATTGA
TTTTGCCAAAGTTGCTTTCATCAAGGTGAAAGACCCTCAGCAAACAGCCG
CAACAATAGCAAAGATGGCTGCAGATCCCAACCCTGCCATTCAAAGCTTG
TTTCGCCGGGCCCAGGAGGGGGATCCTGCAGCGGTGGAAGAGCTGCAGGA
CGTGTTTAATGACCTACACTTTCCAGGTGTTGATATGCGTGTTCTCCGGG
AAGTCAGGCGGAACCATACCTTCGAAAAGTTGTTGTCAATGCCAGAAATC
ATGCGCTTCATCGACCGGAACGAATTCGCGTCAAACTTCTTCCGCTCCGA
CATCAAAGAAACATTTTTAAAACAGGATCCAAGGATAATTGGAACAAATG
CAAATGGAATTCAAATAGACACGGCGGCGACCGTAGGCTCCGACGTTGTG
AATGTAGCAGGAGGGACAGCGGAAAAAGCCACAAAGGGTATTGTACCTTG
AAGCCATTGCGGCCCAATGACAAGGTGGCTTTCCTGCAAAAAATAGCGAA
AGGCAATGTGGATCCTTTAGAGCTTTTCACCCGGGGGGTGAAAAGCAAAG
CTTTTCAGGCCGTATTAAAAAATGTTGAGATCCAACATCGCATTTTGAAA
GAGATGCCGCTCCTTGCTGCCTTCGACGGTTTCCGTCAGATTACTGGTCG
GCGACTAAGCGCAAGAGAGGGTTGTGATTTGGCAGCGTACAGCAATGACA
TGGCCTACGACAGAGAATGTGCGCCGTAGGAGCTTGCTTCTCCTGTTAAT
CGCCTTACTCGCAGCGATGATTGTGAAAGCAAATGATAAAGCAAGACCAT
TTACCCGCCTTCAGTCAACAACGGGCAATGTTGTGGATACCCATGGACAG
CAACTTGACCATAACGAGCAACAAAGGAATCAAGAGACACTTGATGATCG
GAACGGAAAGGAAAGACAGCAAGCCAAGAGAAAGAGACGACTGCAGCAAG
CAGCAAGCGGTTTTGATCATGTTCTTAAAAATAAATCTTCTGTGCGCCTT
GACTTGTATAAA back to top
|