EWM25436.1, cds5281 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM25436.1 vs. NCBI_GenBank
Match: gi|585107197|gb|EWM25436.1| (hypothetical protein Naga_100005g87 [Nannochloropsis gaditana]) HSP 1 Score: 714.531 bits (1843), Expect = 0.000e+0 Identity = 350/350 (100.00%), Postives = 350/350 (100.00%), Query Frame = 0
Query: 1 MFLKINLLCALTCIKVVIWQRTAMTWPTTENVRRRSLLLLLIALLAAMIVKANDKARPFTRLQSTTGNVVDTHGQQLDHNEQQRNQETLDDRNGKERQQAKRKRRLQQAASGFDQPLRPNDKVAFLQKIAKGNVDPLELFTRGVKSKAFQAVLKNVEIQHRILKEMPLLAAFDGFRQITGRRLSARETMEGFAIGVQNVIDFAKVAFIKVKDPQQTAATIAKMAADPNPAIQSLFRRAQEGDPAAVEELQDVFNDLHFPGVDMRVLREVRRNHTFEKLLSMPEIMRFIDRNEFASNFFRSDIKETFLKQDPRIIGTNANGIQIDTAATVGSDVVNVAGGTAEKATKGIVP 350
MFLKINLLCALTCIKVVIWQRTAMTWPTTENVRRRSLLLLLIALLAAMIVKANDKARPFTRLQSTTGNVVDTHGQQLDHNEQQRNQETLDDRNGKERQQAKRKRRLQQAASGFDQPLRPNDKVAFLQKIAKGNVDPLELFTRGVKSKAFQAVLKNVEIQHRILKEMPLLAAFDGFRQITGRRLSARETMEGFAIGVQNVIDFAKVAFIKVKDPQQTAATIAKMAADPNPAIQSLFRRAQEGDPAAVEELQDVFNDLHFPGVDMRVLREVRRNHTFEKLLSMPEIMRFIDRNEFASNFFRSDIKETFLKQDPRIIGTNANGIQIDTAATVGSDVVNVAGGTAEKATKGIVP
Sbjct: 1 MFLKINLLCALTCIKVVIWQRTAMTWPTTENVRRRSLLLLLIALLAAMIVKANDKARPFTRLQSTTGNVVDTHGQQLDHNEQQRNQETLDDRNGKERQQAKRKRRLQQAASGFDQPLRPNDKVAFLQKIAKGNVDPLELFTRGVKSKAFQAVLKNVEIQHRILKEMPLLAAFDGFRQITGRRLSARETMEGFAIGVQNVIDFAKVAFIKVKDPQQTAATIAKMAADPNPAIQSLFRRAQEGDPAAVEELQDVFNDLHFPGVDMRVLREVRRNHTFEKLLSMPEIMRFIDRNEFASNFFRSDIKETFLKQDPRIIGTNANGIQIDTAATVGSDVVNVAGGTAEKATKGIVP 350
BLAST of EWM25436.1 vs. NCBI_GenBank
Match: gi|553183448|ref|XP_005853898.1| (hypothetical protein NGA_0064120 [Nannochloropsis gaditana CCMP526] >gi|422295162|gb|EKU22461.1| hypothetical protein NGA_0064120 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 187.963 bits (476), Expect = 2.532e-56 Identity = 91/92 (98.91%), Postives = 91/92 (98.91%), Query Frame = 0
Query: 24 MTWPTTENVRRRSLLLLLIALLAAMIVKANDKARPFTRLQSTTGNVVDTHGQQLDHNEQQRNQETLDDRNGKERQQAKRKRRLQQAASGFDQ 115
MTWPTTENVRRRSLLLLLIALLAAMIVKANDKARPFTRLQSTTGNVVDTHGQQLDHNEQQRNQETLDDRNGKERQQAKRKRRLQQAASGFD
Sbjct: 1 MTWPTTENVRRRSLLLLLIALLAAMIVKANDKARPFTRLQSTTGNVVDTHGQQLDHNEQQRNQETLDDRNGKERQQAKRKRRLQQAASGFDH 92
BLAST of EWM25436.1 vs. NCBI_GenBank
Match: gi|585102650|gb|EWM22205.1| (hypothetical protein Naga_100291g6 [Nannochloropsis gaditana]) HSP 1 Score: 171.014 bits (432), Expect = 1.854e-47 Identity = 92/266 (34.59%), Postives = 151/266 (56.77%), Query Frame = 0
Query: 31 NVRRRSLLLLLIALLAAMIVKAND---KARPFTRLQSTTGNVVDTHGQQLDHNEQQRNQETLDDRNGKERQQAKRKRRLQQAASGFDQPLRPNDKVAFLQKIAKGNVDPLELFTRGVKSKAFQAVLKNVEIQHRILKEMPLLAAFDGFRQIT-GRRLSARETMEGFAIGVQNVIDFAKVAFI-KVKDPQQTAATIAKMAADPNPAIQSLFRRAQEGDPAAVEELQDVFNDLHFPGVDMRVLREVRRNHTFEKLLSMPEIMRFIDRN 291
++ ++LL+++A+ V A + +RPF+RLQSTTG + ++ ++ +++T DD +P+ + +L + K +P+++F + +K F+A+L N +IQHR+LK+ PLL A GF I RRLSA ET F+ G+ +++ A AF KV +P + +AT+AKMAA +P IQ+LF+RA+ G+ AVEELQD F + H+ G+D + RE+ + H +K MPE+M FI ++
Sbjct: 5 SLYSSTVLLVILAVFMGCTVHAQEHDRSSRPFSRLQSTTG-ASSSSSSSVNSKQESSDKQTDDDFT------------------------KPSSRAGYLLNLTKNTFNPVQVFKDAMNTKGFKAILDNPDIQHRVLKDFPLLGALTGFSTIKDNRRLSAEETKNSFSTGMNTLLNLADDAFFNKVNEPDKVSATLAKMAASSDPGIQNLFKRARAGEQGAVEELQDEFVNQHYSGMDGKAFREISKQHNGDKFKQMPEMMHFIQKD 245
BLAST of EWM25436.1 vs. NCBI_GenBank
Match: gi|585104564|gb|EWM23494.1| (hypothetical protein Naga_100198g11 [Nannochloropsis gaditana]) HSP 1 Score: 158.303 bits (399), Expect = 3.729e-42 Identity = 80/199 (40.20%), Postives = 127/199 (63.82%), Query Frame = 0
Query: 101 KRKRRLQQAASGFDQPLRPNDKVAFLQKIAKGNVDPLELFTRGVKSKAFQAVLKNVEIQHRILKEMPLLAAFDGFRQITGRRLSARETMEGFAIGVQNVIDFAKVAFIKVKDPQQTAATIAKMAADPNPAIQSLFRRAQEGDPAAVEELQDVFNDLHFPGVDMRVLREVRRNHTFEKLLSMPEIMRFIDRNEFASNFFR 299
+R ++ + G P+ K AF QK+ K +D +ELF KSKAF+++L+NVEIQHRI++ +P+L A GFR+ GRRL+ +ET GF+ GV+N+++ K + +P IA+++ +P IQ LF+ A E D A+V EL+++ +PGVD+ +L++V + TF+KLL +PE+ RFID++ + S FR
Sbjct: 110 ERTEEVKSSLQGLFDPVGSPGKSAFFQKVKKDGIDSVELFETLFKSKAFESILENVEIQHRIIEGVPILGAVSGFREARGRRLTDQETTAGFSKGVRNLLEMFKTSAKHALNPTLMNERIAELSKSDDPEIQDLFKGASENDEASVLELKNLAARDLYPGVDLEILQDVMNSLTFDKLLDIPEMARFIDQDPYISRVFR 308
BLAST of EWM25436.1 vs. NCBI_GenBank
Match: gi|553185077|ref|XP_005854196.1| (hypothetical protein NGA_0186800 [Nannochloropsis gaditana CCMP526] >gi|422294860|gb|EKU22160.1| hypothetical protein NGA_0186800 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 143.28 bits (360), Expect = 1.791e-36 Identity = 93/291 (31.96%), Postives = 146/291 (50.17%), Query Frame = 0
Query: 36 SLLLLLIALLAAMIVKAND---KARPFTRLQSTTGNVVDTHGQQLDHNEQQRNQETLDDRNGKERQQAKRKRRLQQAASGFDQPLRPNDKVAFLQKIAKGNVDPLELFTRGVKSKAFQAVLKNVEIQHRILKEMPLLAAFDGFRQIT-GRRLSARE------------------------------TMEGFAIGVQNVIDFAKVAFI-KVKDPQQTAATIAKMAADPNPAIQSLFRRAQEGDPAAVEELQDVFNDLHFPGVDMRVLREVRRNHTFEKLLSMPEIMRFIDRN 291
++LL+++A+ V A + +RPF+RLQSTTG + E +++T DD +P+ + +L + K +P+++F + +K F+A+L N +IQHR+LK+ PLL A GF I RRLSA E T F+ G+ +++ A AF KV +P + +AT+AKMAA +P IQ+LF+RA+ G+ AVEELQD F + H+ G+D + RE+ + H +K MPE+M FI ++
Sbjct: 10 TVLLVVLAVFMGCTVHAQEHDRSSRPFSRLQSTTGASSSSSSSVTSKQESS-DKQTDDDFT------------------------KPSSRAGYLLNLTKNTFNPVQVFKDAMNTKGFKAILDNPDIQHRVLKDFPLLGALTGFSTIKDNRRLSAEEVRWQIRGKRRRKREGNLIYGRGNDETLNAQTKNSFSTGMNTLLNLADDAFFNKVNEPDKVSATLAKMAASSDPGIQNLFKRARAGEQGAVEELQDEFVNQHYSGMDGKAFREITKQHNGDKFKQMPEMMHFIQKD 275
BLAST of EWM25436.1 vs. NCBI_GenBank
Match: gi|553183764|ref|XP_005853961.1| (hypothetical protein NGA_0461700 [Nannochloropsis gaditana CCMP526] >gi|422295096|gb|EKU22395.1| hypothetical protein NGA_0461700 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 98.9821 bits (245), Expect = 2.250e-20 Identity = 56/172 (32.56%), Postives = 94/172 (54.65%), Query Frame = 0
Query: 118 RPNDKVAFLQKIAKGNVDPLELFTRGVKSKAFQAVLKNVEIQHRILKEMPLLAAFDGFRQITGRRLSARETMEGFAIGVQNVIDFAKVAFIKVKDPQQTAATIAKMAADPNPAIQSLFRRAQEGDPAAVEELQDVFNDLHFPGVDMRVLREVRRNHTFEKLLSMPEIMRFID 289
+P+ ++ +Q K +D ++LF S +A+L +VE QH+I++ +PLLAAFDGF++ITGRRL T GF G+ +++ +KDP + ++++ A+ I F A GD A++ + + N +PGV+ VL+ V + K+ EIMR I+
Sbjct: 52 KPDGELTMMQDTWKNGLDIMKLFETSFASPGMKAILDDVETQHKIMENLPLLAAFDGFKEITGRRLDDAGTTAGFTAGLNSILKTLPDMLKTMKDPSISTRALSELLAEDANNISEAFAAASAGDGGAMDTVNEALNKKLYPGVNTDVLKTVSASDPLSKVTGNNEIMRLIN 223
BLAST of EWM25436.1 vs. NCBI_GenBank
Match: gi|553185360|ref|XP_005854240.1| (hypothetical protein NGA_0024302 [Nannochloropsis gaditana CCMP526] >gi|422294820|gb|EKU22120.1| hypothetical protein NGA_0024302 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 94.7449 bits (234), Expect = 9.055e-20 Identity = 45/106 (42.45%), Postives = 70/106 (66.04%), Query Frame = 0
Query: 101 KRKRRLQQAASGFDQPLRPNDKVAFLQKIAKGNVDPLELFTRGVKSKAFQAVLKNVEIQHRILKEMPLLAAFDGFRQITGRRLSARETMEGFAIGVQNVIDFAKVA 206
+R ++ + G P+ K AF QK+ K +D +ELF KSKAF+++L+NVEIQHRI++ +P+L A GFR+ GRRL+ +ET GF+ GV+N+++ K +
Sbjct: 56 ERTEEVKSSLQGLFDPVGSPGKSAFFQKVKKDGIDSVELFETLFKSKAFESILENVEIQHRIIEGVPILGAVSGFREARGRRLTDQETTAGFSKGVRNLLEMFKTS 161
BLAST of EWM25436.1 vs. NCBI_GenBank
Match: gi|585105441|gb|EWM24107.1| (hypothetical protein Naga_100286g4 [Nannochloropsis gaditana]) HSP 1 Score: 97.4413 bits (241), Expect = 5.674e-19 Identity = 56/172 (32.56%), Postives = 94/172 (54.65%), Query Frame = 0
Query: 118 RPNDKVAFLQKIAKGNVDPLELFTRGVKSKAFQAVLKNVEIQHRILKEMPLLAAFDGFRQITGRRLSARETMEGFAIGVQNVIDFAKVAFIKVKDPQQTAATIAKMAADPNPAIQSLFRRAQEGDPAAVEELQDVFNDLHFPGVDMRVLREVRRNHTFEKLLSMPEIMRFID 289
+P+ ++ +Q K +D ++LF S +A+L +VE QH+I++ +PLLAAFDGF++ITGRRL T GF G+ +++ +KDP + ++++ A+ I F A GD A++ + + N +PGV+ VL+ V + K+ EIMR I+
Sbjct: 52 KPDAELTMMQDTWKNGLDIMKLFETSFASPGMKAILDDVETQHKIMENLPLLAAFDGFKEITGRRLDDAGTTAGFTAGLNSILKTLPDMLKTMKDPSISTRALSELLAEDANNISEAFAAASAGDGGAMDTVNEALNKKLYPGVNTDVLKTVSASDPLSKVTGNNEIMRLIN 223 The following BLAST results are available for this feature:
BLAST of EWM25436.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 8
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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