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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100005g79.6719.mrna |
| Orig protein id | gnl|cribi|Naga_100005g79.6719 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002465.1 | supercontig | CM002465.1:623156..626027 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna5286 ID=rna5286|Name=rna5286|organism=Nannochloropsis gaditana|type=mRNA|length=1706bp
CAATATCTTAAAACTTGTTGTTTACGAGGAAAGGATCATAAATGTATGAG
TACTTGCAATGGATGTCGGCTAAAGCATAAAATAAAATCTTGCCGTGAGC
TGATCGCCGTTTCATTTCAAATGGCAGCAACGGCCGAACACGACCCGGTC
GACCCTGCATACACATGGGGAGTTCTGCACCGAGGATTAATAACGGCAAA
ATATGAACGATAACTCCATCACGTCCATGAGTATCAGCATATTAGAAGTC
CATTGTCGTTTCCCACTCTAACCAGCCACAGTAGGGCCTTTCAAGCCATC
TTTCAGGTGGCTGACGAAGCAAGCGGGCTATGATCTCGTTTGTGTCGTTG
GCTTTCCTCATCTTCGCTCTGCACGGGTCCAGTAGCACGGCTTTCGACAT
GAGCTCTTCTGAAATGTCTGTTATCTACCGTTACGGAGAGCTGGCATTGC
GCGATCCGGCTTCTTACAGAAACGAAATTGTGATATCTCCTCGCCCTTAT
TCGTACCTCTTGGCTGACGAACTGCCAGCATCTTGGGACTGGCGCAATGT
CGATGGACTGTCATACACAACCCCGATCCAGAATCAACACATCCCGGTTT
ACTGCGGAAGTTGCTGGTCGTTCAGCGCCATGTCCTCGATTGGTGACCGG
CTCAACATTGCGTCCAACGGACAACATCCAGATATTTTGCCTGCGCCTCA
AGTCCTGATCAATTGCGGGACTGCGGGAGATTGCAATGGCGGCGACAGTG
GGGCTGCTTACGCATGGATCTACGAGGCCGGGGGGATCCCTGATACGAGC
TGCCAAGCGTACGAAGCTCAAAACCGTGCATGCACCGCAGAGAATACCTG
CCGGAACTGTAATGCGACATTCTCGCGGTTGCGGAAGGGACAGACATGTT
TTGCAGTAACGGAGTATCCGAAAATTTACGTGGAGGAGCATGGAAATGTG
ACCGGTGACGCTCAGATCATGGCAGAAATTTTCGCCAGAGGTCCTGTGGT
GTGTTACATTGATGCAGGACCACTCGAGGGTTACACGGGTGGGGTTAACA
TGTATGAGGGCGCAGGAAGGACGAACCACGCCATTGCCCTGGTAGGGTGG
GGTGAAACTGAGGACGGATTGAAGTATTATGTTGGCCGTAATAGTTGGGG
AACTTATTGGGGCGAGAATGGATGGTTCCGAATCGTACGAGGGGGACTCT
TTGATGCCGGAACGTGTTTTTGGGCCGTGCCATCATCAGATTTCAGCGAT
TATGGCGGTGTTGAGCATTCGGAGGAGCGAATGGGAATGAGGACGGATTT
CGGATCCCGCGATAGAATGAGCAAGTGGAGCACTGAGAAATAGTCATTCT
ATGTTAATCCATGTAAGATTAAGATGAGAGTCTTAGATTGAAATGAAAGA
TTGCAAGCATTTGTTTTTGGAAAGAAACGTTTTCGACTAGTGATAAGAAG
GGGTGTGTGCTTTGTAATTTGAGGAAAAAGTTGGTTTGCTCGGTAAGTTC
ATTAGGGAAAAAGAACAACGATAGATGTAATTACACGCAAGGTTTTTTAA
AAGGCGGAGGGCAATCATATTTGTGTGCCTCTGAAAAACGTGGCAGATGA
AGCTGGTAGCCAAGGAAATACACACAAAGAATGCAGCACCAATTAATTTG
CATGCCAAAAAATACCTGGAAACATGGCAATCGATCAACTTCTGCAAGGC
CAGTTG back to topprotein sequence of rna5286 >rna5286-protein ID=rna5286-protein|Name=rna5286|organism=Nannochloropsis gaditana|type=polypeptide|length=215bp
MANASTTEAGRRLRDMMQVFYKKAPRLRPNLVPKSCKPFMDVMAMCSTGS
QRDNVQRILEQQKSKLVRRAIGADGDEDRHLTLKANVNLDKGTCNIYAAT
YVSQVEADLYSTESILNMHSRGDNDELRIRLEYFLSVNGYDGGKADMIEA
QEVYSLAYAIIICLSAAPFRATVGPKGLALPLSGEVDAGAVILALFGDDA
HLIGYNERTDPPRAR back to topmRNA from alignment at CM002465.1:623156..626027- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna5286 ID=rna5286|Name=rna5286|organism=Nannochloropsis gaditana|type=mRNA|length=2872bp|location=Sequence derived from alignment at CM002465.1:623156..626027- (Nannochloropsis gaditana)
GAGACGGTGGTGGTCCTTACGGCTCGATACTCAGAGCGAAAGGGCAGCTC
TGATGATCTGGAGGGAAAAGCGTCTCATGCCTTTTTTGTGAAAACGATAG
AGCAAAGACAGCATGGCCAATGCTTCGACGACAGAGGCAGGGAGGCGGTT
GCGGGATATGATGCAAGTTTTTTACAAGGTGAGAAGGCGGGAGGTTGGAG
GTGAGGGAGGGAGGGCGTATAAGATAGGGTAAGGGAATAGAATGCAAACG
ACACAGGTAGTCATACGCTCGTAAACCCATTCGCATACACATACACCAAC
ACGTTTTATTATCTGGATTCTCTGTTTTCAGAAGGCCCCTCGTTTGCGTC
CCAATCTGGTTCCCAAAAGCTGTAAGCCTTTCATGGACGTCATGGCTATG
TGCAGCACCGGGTCCCAGCGTGACAACGTGCAGCGCATTTTAGAGCAGCA
GAAAAGCAAGTTGGTAGGTTAATACATCGTCAATAATATTTAAGATATAA
GTGCAATGATAATCGCTTGCCCATTATGCGCGCATATTTAGGTTAGAAGA
GCAATCGGGGCAGATGGGGACGAGGACAGGCACCTGACTCTCAAGGCAAA
CGTGAACCTTGACAAGGGCACTTGCAATATTTACGCCGCCACGGTAATAA
AGGAAATTTGGTGAATAGTATGGGGCATAAGCGGGGAATGGCCGCGCGCA
GCATCTTTACTTTCTGTTATTATCACACACGTTAAAATTTACAGTATGTG
AGCCAAGTTGAGGCGGACCTTTACAGCACAGAGAGTATCTTGAACATGCA
TAGTCGTGGAGATAATGATGAGGTGAGTTCAATCATTTCCTGGCCTAGAA
GAGATCCTTTCAGATAGGACCGCCAGTCTGTGGAAGCGCGGGTGAAATTG
TAACGGCGGCCGTGTTAATTATTAGGGCGCTTCACAAACGTTAGGGACGA
TTCCTCACTATCACATATGACATGCAATTGTAGTTGCGTATTCGTTTGGA
ATACTTTTTATCGGTCAATGGATATGACGGAGGCAAGGCTGATATGATTG
AAGCACAGGAAGTATACAGCCTAGCCTACGCGATCATCATTTGCCTGAGG
TTAGTGCATAAACGGGAAGTCATGTCTTTTGTGAGAAAGAGTTGCGCTGA
TTCGTTTAAAACCACCACCAAACATCAGTGCTGCACCATTCAGAGCCACG
GTAGGGCCTAAAGGCTTGGCACTGCCCCTTTCTGGCGAAGTGGATGCGGG
TGCGGTAATCTTGGCCTTATTCGGGGATGACGCACACCTTATTGGGTACA
ACGAGAGGACTGATCCGCCAAGAGCGAGATAATTCACATATCAAAGAGCA
TATTATAAGATAGATTGTCAAAAATCGTCAGCTAAATAACCGTTTAGCTT
CTTAATTACGACGGTGTCAGCAGGGTCATTCTTTTACATCATTGGAATAC
CAGACCATGCTGTGGTCAAAATTTGTCGAAAATGCTTTGAGGCCCTTTGT
ATGGTACAACTTTTTCATCGTCCGGGTAGGGGTCAATACTTGAGACGTCC
ATTGGATCGCGAATAGAGGGATGGAAGGGGGCAGAAATGGTCTTCCGACG
CAGTTGACTCCAATCCAGCCCTGAAAAGAAGGGATGCTCCATTATCTCTG
TTGGCCCTCCGAGGAGATTTCCAAGGCGAACGGCAGGGTTTGGGCTCATC
AGGCTCTTGATCAAGTCGATACAATCGTTGTCCAGCCCTCGCGGAAATGT
GAGGTTTGTGGAAGAATGTATTATTTTCTTGAAGATTTCGTCGTGTTGCT
CGTCTTGAAAGGGCGTTCGGCCGACCATAAGCTCATAGACGAGGCAACCG
AAAGCCCAGTAATCTACGCTCTTATCATGGCCGCGGCTCAAAACCAATTC
AGGTGCAAGATACTCGGGTGTGCCACACAATGTAAAAGTCTTGAGCTGCA
GGTTGCCGTTCTTCTGGAAAGGAACAGTCTTGGCGAAGCCGAAATCAATT
ATCTTGAGGTATCCTTGGGAGTCAAGCAATAGATTTTCGGGTTTAAGGTC
ACGGTATGCAACATCTCTCTTGTGGATGTAATCCAAAGCGGACAGCACAC
AGGCTGCATAGAACTGGGTGTGTACTTTCAGAAATCCTCCAAATTTTGTT
CTCGGAAGTGAATCAAAACGATCATATATGTACATCCAAAGTTCTCCTCC
TTGCACCAATTCCATAAGCATATAAATCTGATCGGCGTCCTTAAGCGTGC
CGAGAAGTTTGAGGATGAAGGGATGATTGCATGATGACAAGATGTTTTTC
TCGTTCATGATATTCCGTTCCTGATGGCAAGCGACAATATGGGCTTTTTG
CATGCACTTCAGTGCTCCCATCGCGTGCTGTATTTTTGGGTTCGAAACAT
CTGGACATGAGTCCTCGAATATCCTGCTCTCTTTGCGATCTCCTTCTAAT
TGTCATCGTCAAAATGAATGGAAACGCTAAGGCATCGAGGAGCTTCGCAT
CTTTCTCAGTGCTTATTCTTGAATTCAAAAAGACGCATGATACTCTAGGG
CAGAATAGAGCGCATATCTTATAGAATACCCTTACCGAGTTTACAAACTG
TACAAGCTTTACGCGCCCAAACGTCCCTGTCCCAAGCGTCCGCTGCTGCA
TGAAAAGGAGAAGAATGATTCTTACGTATATTGTTTTAGGTGACGCAATT
CAGTAACACGATATAAAAGTATAAATTGAATACACCTACCACATTCAGAT
CCTCCATCTTGAAGCTGCTCTGCGACACATCTTCACCAGCTGCGCTAGGT
GCGGCACTCTCAACATTATAAACGGGTTTCGTTTCAGATGCGATGCCGAC
AACCTCTTGTGACTGTCTTCGC back to topCoding sequence (CDS) from alignment at CM002465.1:623156..626027- >rna5286 ID=rna5286|Name=rna5286|organism=Nannochloropsis gaditana|type=CDS|length=3888bp|location=Sequence derived from alignment at CM002465.1:623156..626027- (Nannochloropsis gaditana)
TGCTGCACCATTCAGAGCCACGGTAGGGCCTAAAGGCTTGGCACTGCCCC
TTTCTGGCGAAGTGGATGCGGGTGCGGTAATCTTGGCCTTATTCGGGGAT
GACGCACACCTTATTGGGTACAACGAGAGGACTGATCCGCCAAGAGCGAG
ATAATTGCGTATTCGTTTGGAATACTTTTTATCGGTCAATGGATATGACG
GAGGCAAGGCTGATATGATTGAAGCACAGGAAGTATACAGCCTAGCCTAC
GCGATCATCATTTGCCTGAGTATGTGAGCCAAGTTGAGGCGGACCTTTAC
AGCACAGAGAGTATCTTGAACATGCATAGTCGTGGAGATAATGATGAGGT
TAGAAGAGCAATCGGGGCAGATGGGGACGAGGACAGGCACCTGACTCTCA
AGGCAAACGTGAACCTTGACAAGGGCACTTGCAATATTTACGCCGCCACG
AAGGCCCCTCGTTTGCGTCCCAATCTGGTTCCCAAAAGCTGTAAGCCTTT
CATGGACGTCATGGCTATGTGCAGCACCGGGTCCCAGCGTGACAACGTGC
AGCGCATTTTAGAGCAGCAGAAAAGCAAGTTGATGGCCAATGCTTCGACG
ACAGAGGCAGGGAGGCGGTTGCGGGATATGATGCAAGTTTTTTACAAGTG
CTGCACCATTCAGAGCCACGGTAGGGCCTAAAGGCTTGGCACTGCCCCTT
TCTGGCGAAGTGGATGCGGGTGCGGTAATCTTGGCCTTATTCGGGGATGA
CGCACACCTTATTGGGTACAACGAGAGGACTGATCCGCCAAGAGCGAGAT
AATTGCGTATTCGTTTGGAATACTTTTTATCGGTCAATGGATATGACGGA
GGCAAGGCTGATATGATTGAAGCACAGGAAGTATACAGCCTAGCCTACGC
GATCATCATTTGCCTGAGTATGTGAGCCAAGTTGAGGCGGACCTTTACAG
CACAGAGAGTATCTTGAACATGCATAGTCGTGGAGATAATGATGAGGTTA
GAAGAGCAATCGGGGCAGATGGGGACGAGGACAGGCACCTGACTCTCAAG
GCAAACGTGAACCTTGACAAGGGCACTTGCAATATTTACGCCGCCACGAA
GGCCCCTCGTTTGCGTCCCAATCTGGTTCCCAAAAGCTGTAAGCCTTTCA
TGGACGTCATGGCTATGTGCAGCACCGGGTCCCAGCGTGACAACGTGCAG
CGCATTTTAGAGCAGCAGAAAAGCAAGTTGATGGCCAATGCTTCGACGAC
AGAGGCAGGGAGGCGGTTGCGGGATATGATGCAAGTTTTTTACAAGTGCT
GCACCATTCAGAGCCACGGTAGGGCCTAAAGGCTTGGCACTGCCCCTTTC
TGGCGAAGTGGATGCGGGTGCGGTAATCTTGGCCTTATTCGGGGATGACG
CACACCTTATTGGGTACAACGAGAGGACTGATCCGCCAAGAGCGAGATAA
TTGCGTATTCGTTTGGAATACTTTTTATCGGTCAATGGATATGACGGAGG
CAAGGCTGATATGATTGAAGCACAGGAAGTATACAGCCTAGCCTACGCGA
TCATCATTTGCCTGAGTATGTGAGCCAAGTTGAGGCGGACCTTTACAGCA
CAGAGAGTATCTTGAACATGCATAGTCGTGGAGATAATGATGAGGTTAGA
AGAGCAATCGGGGCAGATGGGGACGAGGACAGGCACCTGACTCTCAAGGC
AAACGTGAACCTTGACAAGGGCACTTGCAATATTTACGCCGCCACGAAGG
CCCCTCGTTTGCGTCCCAATCTGGTTCCCAAAAGCTGTAAGCCTTTCATG
GACGTCATGGCTATGTGCAGCACCGGGTCCCAGCGTGACAACGTGCAGCG
CATTTTAGAGCAGCAGAAAAGCAAGTTGATGGCCAATGCTTCGACGACAG
AGGCAGGGAGGCGGTTGCGGGATATGATGCAAGTTTTTTACAAGTGCTGC
ACCATTCAGAGCCACGGTAGGGCCTAAAGGCTTGGCACTGCCCCTTTCTG
GCGAAGTGGATGCGGGTGCGGTAATCTTGGCCTTATTCGGGGATGACGCA
CACCTTATTGGGTACAACGAGAGGACTGATCCGCCAAGAGCGAGATAATT
GCGTATTCGTTTGGAATACTTTTTATCGGTCAATGGATATGACGGAGGCA
AGGCTGATATGATTGAAGCACAGGAAGTATACAGCCTAGCCTACGCGATC
ATCATTTGCCTGAGTATGTGAGCCAAGTTGAGGCGGACCTTTACAGCACA
GAGAGTATCTTGAACATGCATAGTCGTGGAGATAATGATGAGGTTAGAAG
AGCAATCGGGGCAGATGGGGACGAGGACAGGCACCTGACTCTCAAGGCAA
ACGTGAACCTTGACAAGGGCACTTGCAATATTTACGCCGCCACGAAGGCC
CCTCGTTTGCGTCCCAATCTGGTTCCCAAAAGCTGTAAGCCTTTCATGGA
CGTCATGGCTATGTGCAGCACCGGGTCCCAGCGTGACAACGTGCAGCGCA
TTTTAGAGCAGCAGAAAAGCAAGTTGATGGCCAATGCTTCGACGACAGAG
GCAGGGAGGCGGTTGCGGGATATGATGCAAGTTTTTTACAAGTGCTGCAC
CATTCAGAGCCACGGTAGGGCCTAAAGGCTTGGCACTGCCCCTTTCTGGC
GAAGTGGATGCGGGTGCGGTAATCTTGGCCTTATTCGGGGATGACGCACA
CCTTATTGGGTACAACGAGAGGACTGATCCGCCAAGAGCGAGATAATTGC
GTATTCGTTTGGAATACTTTTTATCGGTCAATGGATATGACGGAGGCAAG
GCTGATATGATTGAAGCACAGGAAGTATACAGCCTAGCCTACGCGATCAT
CATTTGCCTGAGTATGTGAGCCAAGTTGAGGCGGACCTTTACAGCACAGA
GAGTATCTTGAACATGCATAGTCGTGGAGATAATGATGAGGTTAGAAGAG
CAATCGGGGCAGATGGGGACGAGGACAGGCACCTGACTCTCAAGGCAAAC
GTGAACCTTGACAAGGGCACTTGCAATATTTACGCCGCCACGAAGGCCCC
TCGTTTGCGTCCCAATCTGGTTCCCAAAAGCTGTAAGCCTTTCATGGACG
TCATGGCTATGTGCAGCACCGGGTCCCAGCGTGACAACGTGCAGCGCATT
TTAGAGCAGCAGAAAAGCAAGTTGATGGCCAATGCTTCGACGACAGAGGC
AGGGAGGCGGTTGCGGGATATGATGCAAGTTTTTTACAAGTGCTGCACCA
TTCAGAGCCACGGTAGGGCCTAAAGGCTTGGCACTGCCCCTTTCTGGCGA
AGTGGATGCGGGTGCGGTAATCTTGGCCTTATTCGGGGATGACGCACACC
TTATTGGGTACAACGAGAGGACTGATCCGCCAAGAGCGAGATAATTGCGT
ATTCGTTTGGAATACTTTTTATCGGTCAATGGATATGACGGAGGCAAGGC
TGATATGATTGAAGCACAGGAAGTATACAGCCTAGCCTACGCGATCATCA
TTTGCCTGAGTATGTGAGCCAAGTTGAGGCGGACCTTTACAGCACAGAGA
GTATCTTGAACATGCATAGTCGTGGAGATAATGATGAGGTTAGAAGAGCA
ATCGGGGCAGATGGGGACGAGGACAGGCACCTGACTCTCAAGGCAAACGT
GAACCTTGACAAGGGCACTTGCAATATTTACGCCGCCACGAAGGCCCCTC
GTTTGCGTCCCAATCTGGTTCCCAAAAGCTGTAAGCCTTTCATGGACGTC
ATGGCTATGTGCAGCACCGGGTCCCAGCGTGACAACGTGCAGCGCATTTT
AGAGCAGCAGAAAAGCAAGTTGATGGCCAATGCTTCGACGACAGAGGCAG
GGAGGCGGTTGCGGGATATGATGCAAGTTTTTTACAAG back to top
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