EWM25425.1, cds5273 (CDS) Nannochloropsis gaditana

Overview
NameEWM25425.1
Unique Namecds5273
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002465.1:625850..625915 -
Alignment locationCM002465.1:625565..625696 -
Alignment locationCM002465.1:625385..625486 -
Alignment locationCM002465.1:625206..625283 -
Alignment locationCM002465.1:624929..625044 -
Alignment locationCM002465.1:624696..624849 -

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Properties
Property NameValue
Protein idEWM25425.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100005g79.6719.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002465.1supercontigCM002465.1:625850..625915 -
CM002465.1supercontigCM002465.1:625565..625696 -
CM002465.1supercontigCM002465.1:625385..625486 -
CM002465.1supercontigCM002465.1:625206..625283 -
CM002465.1supercontigCM002465.1:624929..625044 -
CM002465.1supercontigCM002465.1:624696..624849 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM25425.1 vs. NCBI_GenBank
Match: gi|585107186|gb|EWM25425.1| (hypothetical protein Naga_100005g79 [Nannochloropsis gaditana])

HSP 1 Score: 444.891 bits (1143), Expect = 3.543e-158
Identity = 215/215 (100.00%), Postives = 215/215 (100.00%), Query Frame = 0 
Query:    1 MANASTTEAGRRLRDMMQVFYKKAPRLRPNLVPKSCKPFMDVMAMCSTGSQRDNVQRILEQQKSKLVRRAIGADGDEDRHLTLKANVNLDKGTCNIYAATYVSQVEADLYSTESILNMHSRGDNDELRIRLEYFLSVNGYDGGKADMIEAQEVYSLAYAIIICLSAAPFRATVGPKGLALPLSGEVDAGAVILALFGDDAHLIGYNERTDPPRAR 215
            MANASTTEAGRRLRDMMQVFYKKAPRLRPNLVPKSCKPFMDVMAMCSTGSQRDNVQRILEQQKSKLVRRAIGADGDEDRHLTLKANVNLDKGTCNIYAATYVSQVEADLYSTESILNMHSRGDNDELRIRLEYFLSVNGYDGGKADMIEAQEVYSLAYAIIICLSAAPFRATVGPKGLALPLSGEVDAGAVILALFGDDAHLIGYNERTDPPRAR
Sbjct:    1 MANASTTEAGRRLRDMMQVFYKKAPRLRPNLVPKSCKPFMDVMAMCSTGSQRDNVQRILEQQKSKLVRRAIGADGDEDRHLTLKANVNLDKGTCNIYAATYVSQVEADLYSTESILNMHSRGDNDELRIRLEYFLSVNGYDGGKADMIEAQEVYSLAYAIIICLSAAPFRATVGPKGLALPLSGEVDAGAVILALFGDDAHLIGYNERTDPPRAR 215
The following BLAST results are available for this feature:
BLAST of EWM25425.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585107186|gb|EWM25425.1|3.543e-158100.00hypothetical protein Naga_100005g79 [Nannochlorops... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna5286rna5286Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications