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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100005g37.6664.mrna |
| Orig protein id | gnl|cribi|Naga_100005g37.6664 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002465.1 | supercontig | CM002465.1:533287..534719 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna5250 ID=rna5250|Name=rna5250|organism=Nannochloropsis gaditana|type=mRNA|length=1431bp
ATGAAGATCAAGACACTCAGTCGATGTGAAGAGACTTTCACAAGGGAGTG
CAAAGGAGATGTCGTCAAGGTTTTTCGAAATCTGGATCCCGCCCTACATC
CTTTTGACAAAGCCCGGGAATATACTCGCGCCCTTCAAGCGACTAAGCTG
GATAAGCTGTTTGCCAAACCATTTATCGGTGCATTGGATGGCCACGCAGA
TGGTGTATTTTGCTCTGCTCTTAGCAAACGAAATTTGGTTCAGTTCTTAA
CAGGAGCTTGTGACGGTGAGGTGCGAGTATGGGATTTAAATGTGCGCAAA
TGTGTGTGGCGTGCGTATGCACACGCAGGTTTCGTCAGAGGTCTTTCTGT
AGCACCCGGTGGGGGAACTTTTTTCTCTTGCGGAGACAAGACAGTCAAGC
AATGGACATTATGCGTCGCAGACGACTCCAGACAGGAACCCGCGGCTCTC
AATACGTGGCTCCACAGTGAGACACTGACATCCATTGATCATCACTGGCG
CAACGCACATTTCGCCACGGCGGCTGACACCCGCGTTTTGGTGTGGGACC
ATGCACGTTCGAATCCCGTTCAATCATTTTCGTGGGGATGCGATGCCATC
TCCTGCGTGCGATACAATCCCGCTGAGCGCTCGCTTCTGGCCAGCACGGG
ATCGGACCGGGCGGTCACGCTCTTCGACACGCGCGAGGGTGCGGCTATGC
GGAAGGCCGTGCTTGTCATGCGCTCGAACGCACTGGCCTGGAATCCGCAA
GAACCCTTGAATTTCACAGTTGCCAGCGAGGACCACAATCTCTATACTTT
CGATCTCCGAAAGCTTGACCAAGCCAAGCTCATCCACAAGGATCACGTGG
GCGCCGTCATGGACCTCGCCTTCTCACCTACAGGTCAAGAATTCGTCACC
GGCTCATACGATCGCACCGTGCGTATTTTTGGTCACAGAGAAGGCCGGAG
CCGTGAGGTTTATCACACCAAACGTATGCAGCGCGTCTTCTGCGTCAATT
TTTCGGGGGACGGCCGCTTCGTGCTCACGGGCTCTGACGACACCAACCTC
CGAATATGGAAGGCAGAAGCCTCACAGCAACTTGGAGTGAAAGTTCCTCG
GGCAGAGAAGAAGTTGGAGTACGAGGAAGCGTTGAAAAAGCGCTATCAAC
ACATGCCTGAGGTGCGGCGCATCGCTAAACACCGGCACAGAGCCAACGAC
GCAAAGCTCAAAATCGCAGGAAGCATGCAAGAAAAGATAGCGAAGATAGT
AAATTTGTGCCAGAGCGCAAACAGAAGGTTGTGGCGGAGATTTCATAGAT
GTCCACGCGCTGCAACGCATGTCGTGTACAGCTTGATTTTTGTAAAACAT
TACATTGAATTAGAACGAGGCATGTCACTTCATTATATCGCATTGGAACA
TATATTTTTTAAATTCGTGCCGATATGTTGA back to topprotein sequence of rna5250 >rna5250-protein ID=rna5250-protein|Name=rna5250|organism=Nannochloropsis gaditana|type=polypeptide|length=351bp
MEAMFWLLEEMTMVVNGFRSFSHEVFRRVIFDEFLGTNEAYIRQHDLMAR
YFQKMPTCSRNFECLAYHLKAAGLWTKLKEALVDIENFRMWWTPAHKSEF
ISLWASLTCRKTFAKYFATARTKSTSDLNHYQGVRAYFDVVDEYVRSLEY
YREKQNPRDEDLADVVLRIAEFLLEYAMLGHEDSADVPTFLHPTISHDDL
RSIGVPVLAIDANGEARLTEPRFQGNTEAIMSQTANAPLSPSALAEIAND
RKAVSTYFYNRWMWIQFPLVAIANCGERYSLGIRSVRHFEGQDQPSSDVC
IAESADTLMGVDENKAVKSETERKMYLRTGDEESVQKVCRISDKLPQYDN
I back to topmRNA from alignment at CM002465.1:533287..534719+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna5250 ID=rna5250|Name=rna5250|organism=Nannochloropsis gaditana|type=mRNA|length=1433bp|location=Sequence derived from alignment at CM002465.1:533287..534719+ (Nannochloropsis gaditana)
ATGGAGGCCATGTTTTGGTTGCTTGAAGAGATGACCATGGTTGTGAATGG
CTTCCGGTAAGACAACGTCTAGTAAGGGGAAATAATAAAAATATCTTTCT
TCTCAGGAAATTTTCATTTCTTAATGCAACAGAAGCTTTTCTCATGAGGT
TTTTCGAAGGGTAATTTTCGATGAATTTCTGGGGACAAATGAAGCCTATA
TTCGCCAGCACGACCTCATGGCACGGTACTTTCAAAAAATGCCTACGTGC
TCACGCAATTTTGAATGTCTTGCGTACCATCTCAAGGCCGCGGGATTGTG
GACGAAATTGAAAGAAGCCCTTGTGGACATTGAAAATTTCAGGATGTGGT
GGACGCCGGCGCACAAAAGCGAGTTTATTTCGTTGTGGGCGTCCCTGACA
TGTCGTAAAACTTTTGCGAAGTATTTTGCAACCGCGAGAACGAAGTCTAC
CAGCGATTTAAATCACTATCAGGTATGATTAGACCCTCCTTTACAATGCC
TGTATCATAACACAGTGAAGAGTTTCTTTACAGCTGTCTTGTACATATCA
TCCATTTTCTAAAAAAATAGTGTTTCGAACTAAACGATTGAATGTCGTGC
GTGTGTATGTCTTTCAGGATGCACGCAAGCCCCGCTGGCTCTTCACCAAT
TATTATAATATATATTATGTATTCCACATTCAATACCTTTCCGAAAAAGA
TCTATGATTTTTTGTGAAAAGCTATGCGAATTAGAGCCCTTAATTCGCCT
TGCTGACAATCGCAACATATTAGGGTGTTCGGGCGTATTTCGATGTGGTG
GATGAGTATGTTCGCAGCTTAGAATACTACAGAGAGAAACAGAACCCCAG
AGATGAAGACTTGGCCGACGTAGTCTTACGCATAGCAGAATTTCTACTAG
AATATGCAATGTTAGGACATGAAGATTCGGCAGATGTGCCGACATTCCTC
CATCCGACAATTTCCCATGATGATTTGAGGTCTATCGGGGTACCTGTTTT
GGCCATCGATGCCAATGGAGAGGCGCGCCTCACCGAACCACGTTTTCAAG
GTAATACAGAGGCCATTATGAGTCAAACGGCTAATGCGCCATTATCTCCC
AGCGCCCTTGCCGAAATAGCAAATGACAGGAAGGCCGTTTCGACATATTT
TTATAATCGATGGATGTGGATTCAATTTCCTTTGGTGGCTATTGCAAATT
GCGGAGAGCGCTACAGCTTAGGTATTCGTAGCGTACGACACTTCGAAGGA
CAGGATCAGCCCTCTTCTGATGTTTGCATAGCCGAATCCGCGGATACTTT
GATGGGTGTCGATGAAAACAAAGCTGTCAAGTCAGAGACCGAGCGAAAAA
TGTACTTACGTACTGGTGACGAGGAAAGCGTCCAAAAGGTATGTAGGATC
TCGGATAAGCTGCCTCAATACGACAACATATGA back to topCoding sequence (CDS) from alignment at CM002465.1:533287..534719+ >rna5250 ID=rna5250|Name=rna5250|organism=Nannochloropsis gaditana|type=CDS|length=3168bp|location=Sequence derived from alignment at CM002465.1:533287..534719+ (Nannochloropsis gaditana)
ATGGAGGCCATGTTTTGGTTGCTTGAAGAGATGACCATGGTTGTGAATGG
CTTCCGAAGCTTTTCTCATGAGGTTTTTCGAAGGGTAATTTTCGATGAAT
TTCTGGGGACAAATGAAGCCTATATTCGCCAGCACGACCTCATGGCACGG
TACTTTCAAAAAATGCCTACGTGCTCACGCAATTTTGAATGTCTTGCGTA
CCATCTCAAGGCCGCGGGATTGTGGACGAAATTGAAAGAAGCCCTTGTGG
ACATTGAAAATTTCAGGATGTGGTGGACGCCGGCGCACAAAAGCGAGTTT
ATTTCGTTGTGGGCGTCCCTGACATGTCGTAAAACTTTTGCGAAGTATTT
TGCAACCGCGAGAACGAAGTCTACCAGCGATTTAAATCACTATCAGGGTG
TTCGGGCGTATTTCGATGTGGTGGATGAGTATGTTCGCAGCTTAGAATAC
TACAGAGAGAAACAGAACCCCAGAGATGAAGACTTGGCCGACGTAGTCTT
ACGCATAGCAGAATTTCTACTAGAATATGCAATGTTAGGACATGAAGATT
CGGCAGATGTGCCGACATTCCTCCATCCGACAATTTCCCATGATGATTTG
AGGTCTATCGGGGTACCTGTTTTGGCCATCGATGCCAATGGAGAGGCGCG
CCTCACCGAACCACGTTTTCAAGGTAATACAGAGGCCATTATGAGTCAAA
CGGCTAATGCGCCATTATCTCCCAGCGCCCTTGCCGAAATAGCAAATGAC
AGGAAGGCCGTTTCGACATATTTTTATAATCGATGGATGTGGATTCAATT
TCCTTTGGTGGCTATTGCAAATTGCGGAGAGCGCTACAGCTTAGGTATTC
GTAGCGTACGACACTTCGAAGGACAGGATCAGCCCTCTTCTGATGTTTGC
ATAGCCGAATCCGCGGATACTTTGATGGGTGTCGATGAAAACAAAGCTGT
CAAGTCAGAGACCGAGCGAAAAATGTACTTACGTACTGGTGACGAGGAAA
GCGTCCAAAAGGTATGTAGGATCTCGGATAAGCTGCCTCAATACGACAAC
ATATGAATGGAGGCCATGTTTTGGTTGCTTGAAGAGATGACCATGGTTGT
GAATGGCTTCCGAAGCTTTTCTCATGAGGTTTTTCGAAGGGTAATTTTCG
ATGAATTTCTGGGGACAAATGAAGCCTATATTCGCCAGCACGACCTCATG
GCACGGTACTTTCAAAAAATGCCTACGTGCTCACGCAATTTTGAATGTCT
TGCGTACCATCTCAAGGCCGCGGGATTGTGGACGAAATTGAAAGAAGCCC
TTGTGGACATTGAAAATTTCAGGATGTGGTGGACGCCGGCGCACAAAAGC
GAGTTTATTTCGTTGTGGGCGTCCCTGACATGTCGTAAAACTTTTGCGAA
GTATTTTGCAACCGCGAGAACGAAGTCTACCAGCGATTTAAATCACTATC
AGGGTGTTCGGGCGTATTTCGATGTGGTGGATGAGTATGTTCGCAGCTTA
GAATACTACAGAGAGAAACAGAACCCCAGAGATGAAGACTTGGCCGACGT
AGTCTTACGCATAGCAGAATTTCTACTAGAATATGCAATGTTAGGACATG
AAGATTCGGCAGATGTGCCGACATTCCTCCATCCGACAATTTCCCATGAT
GATTTGAGGTCTATCGGGGTACCTGTTTTGGCCATCGATGCCAATGGAGA
GGCGCGCCTCACCGAACCACGTTTTCAAGGTAATACAGAGGCCATTATGA
GTCAAACGGCTAATGCGCCATTATCTCCCAGCGCCCTTGCCGAAATAGCA
AATGACAGGAAGGCCGTTTCGACATATTTTTATAATCGATGGATGTGGAT
TCAATTTCCTTTGGTGGCTATTGCAAATTGCGGAGAGCGCTACAGCTTAG
GTATTCGTAGCGTACGACACTTCGAAGGACAGGATCAGCCCTCTTCTGAT
GTTTGCATAGCCGAATCCGCGGATACTTTGATGGGTGTCGATGAAAACAA
AGCTGTCAAGTCAGAGACCGAGCGAAAAATGTACTTACGTACTGGTGACG
AGGAAAGCGTCCAAAAGGTATGTAGGATCTCGGATAAGCTGCCTCAATAC
GACAACATATGAATGGAGGCCATGTTTTGGTTGCTTGAAGAGATGACCAT
GGTTGTGAATGGCTTCCGAAGCTTTTCTCATGAGGTTTTTCGAAGGGTAA
TTTTCGATGAATTTCTGGGGACAAATGAAGCCTATATTCGCCAGCACGAC
CTCATGGCACGGTACTTTCAAAAAATGCCTACGTGCTCACGCAATTTTGA
ATGTCTTGCGTACCATCTCAAGGCCGCGGGATTGTGGACGAAATTGAAAG
AAGCCCTTGTGGACATTGAAAATTTCAGGATGTGGTGGACGCCGGCGCAC
AAAAGCGAGTTTATTTCGTTGTGGGCGTCCCTGACATGTCGTAAAACTTT
TGCGAAGTATTTTGCAACCGCGAGAACGAAGTCTACCAGCGATTTAAATC
ACTATCAGGGTGTTCGGGCGTATTTCGATGTGGTGGATGAGTATGTTCGC
AGCTTAGAATACTACAGAGAGAAACAGAACCCCAGAGATGAAGACTTGGC
CGACGTAGTCTTACGCATAGCAGAATTTCTACTAGAATATGCAATGTTAG
GACATGAAGATTCGGCAGATGTGCCGACATTCCTCCATCCGACAATTTCC
CATGATGATTTGAGGTCTATCGGGGTACCTGTTTTGGCCATCGATGCCAA
TGGAGAGGCGCGCCTCACCGAACCACGTTTTCAAGGTAATACAGAGGCCA
TTATGAGTCAAACGGCTAATGCGCCATTATCTCCCAGCGCCCTTGCCGAA
ATAGCAAATGACAGGAAGGCCGTTTCGACATATTTTTATAATCGATGGAT
GTGGATTCAATTTCCTTTGGTGGCTATTGCAAATTGCGGAGAGCGCTACA
GCTTAGGTATTCGTAGCGTACGACACTTCGAAGGACAGGATCAGCCCTCT
TCTGATGTTTGCATAGCCGAATCCGCGGATACTTTGATGGGTGTCGATGA
AAACAAAGCTGTCAAGTCAGAGACCGAGCGAAAAATGTACTTACGTACTG
GTGACGAGGAAAGCGTCCAAAAGGTATGTAGGATCTCGGATAAGCTGCCT
CAATACGACAACATATGA back to top
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