EWM25370.1, cds5237 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM25370.1 vs. NCBI_GenBank
Match: gi|585107131|gb|EWM25370.1| (hypothetical protein Naga_100005g37 [Nannochloropsis gaditana]) HSP 1 Score: 739.184 bits (1907), Expect = 0.000e+0 Identity = 351/351 (100.00%), Postives = 351/351 (100.00%), Query Frame = 0
Query: 1 MEAMFWLLEEMTMVVNGFRSFSHEVFRRVIFDEFLGTNEAYIRQHDLMARYFQKMPTCSRNFECLAYHLKAAGLWTKLKEALVDIENFRMWWTPAHKSEFISLWASLTCRKTFAKYFATARTKSTSDLNHYQGVRAYFDVVDEYVRSLEYYREKQNPRDEDLADVVLRIAEFLLEYAMLGHEDSADVPTFLHPTISHDDLRSIGVPVLAIDANGEARLTEPRFQGNTEAIMSQTANAPLSPSALAEIANDRKAVSTYFYNRWMWIQFPLVAIANCGERYSLGIRSVRHFEGQDQPSSDVCIAESADTLMGVDENKAVKSETERKMYLRTGDEESVQKVCRISDKLPQYDNI 351
MEAMFWLLEEMTMVVNGFRSFSHEVFRRVIFDEFLGTNEAYIRQHDLMARYFQKMPTCSRNFECLAYHLKAAGLWTKLKEALVDIENFRMWWTPAHKSEFISLWASLTCRKTFAKYFATARTKSTSDLNHYQGVRAYFDVVDEYVRSLEYYREKQNPRDEDLADVVLRIAEFLLEYAMLGHEDSADVPTFLHPTISHDDLRSIGVPVLAIDANGEARLTEPRFQGNTEAIMSQTANAPLSPSALAEIANDRKAVSTYFYNRWMWIQFPLVAIANCGERYSLGIRSVRHFEGQDQPSSDVCIAESADTLMGVDENKAVKSETERKMYLRTGDEESVQKVCRISDKLPQYDNI
Sbjct: 1 MEAMFWLLEEMTMVVNGFRSFSHEVFRRVIFDEFLGTNEAYIRQHDLMARYFQKMPTCSRNFECLAYHLKAAGLWTKLKEALVDIENFRMWWTPAHKSEFISLWASLTCRKTFAKYFATARTKSTSDLNHYQGVRAYFDVVDEYVRSLEYYREKQNPRDEDLADVVLRIAEFLLEYAMLGHEDSADVPTFLHPTISHDDLRSIGVPVLAIDANGEARLTEPRFQGNTEAIMSQTANAPLSPSALAEIANDRKAVSTYFYNRWMWIQFPLVAIANCGERYSLGIRSVRHFEGQDQPSSDVCIAESADTLMGVDENKAVKSETERKMYLRTGDEESVQKVCRISDKLPQYDNI 351
BLAST of EWM25370.1 vs. NCBI_GenBank
Match: gi|676393737|ref|XP_009040146.1| (hypothetical protein AURANDRAFT_66563 [Aureococcus anophagefferens] >gi|323449356|gb|EGB05245.1| hypothetical protein AURANDRAFT_66563 [Aureococcus anophagefferens]) HSP 1 Score: 267.314 bits (682), Expect = 9.499e-77 Identity = 132/322 (40.99%), Postives = 202/322 (62.73%), Query Frame = 0
Query: 2 EAMFWLLEEMTMVVNGFRSFSHEVFRRVIFDEFLGTNEAYIRQHDLMARYFQKMPTCSRNFECLAYHLKAAGLWTKLKEALVDIENFRMWWTPAHKSEFISLWASLT-CRKTFAKYFATARTKSTSDLNHYQGVRAYFDVVDEYVRSLEYYREKQNPRDEDLADVVLRIAEFLLEYAMLGHEDSADVPTFLHPTISHDDLRSIGVPVLAIDANGEARLTEPRFQGNTEAIMSQTANAPLSPSALAEIANDRKAVSTYFYNRWMWIQFPLVAIANCGERYSLGIRSVRHFEGQDQPSSDVCIAESADTLMGVDENKAVKSETE 322
E + +L + T VNG R+FSHE + V+++E++ + E ++R H LMARYF K+P C R + L YHL+ +G W++L+ ALVD++ FR+WWT AHK+EF++LWASLT C T A + + Q R DVVDEYVRS++ Y+ +P D++LA V+L IA+F+LE+A L E++ADVP F+HPTI ++DL S+GVP L+ D +G + L P + +T+ P + ++ + STYFY+RWMWIQFP V++ANCGER+ ++ V H Q+Q + +S + + V ++K +E++
Sbjct: 408 ECIRRVLRDYTFSVNGLRNFSHEDYAVVVYNEYIRSPEVHVRAHQLMARYFGKLPPCDRKLDALPYHLEVSGSWSRLRAALVDVQMFRLWWTAAHKTEFLNLWASLTACSNTGAPIRKLVTGEFDDTMRCAQPPRPCLDVVDEYVRSVDDYKFVHSPSDDELASVILHIADFMLEFATLSLEEAADVPQFVHPTIPNEDLASLGVPFLSRDKDGNSVLNTPHVEASTDK--GSLGAKPTAMDTPMKVNEEIPLCSTYFYHRWMWIQFPWVSLANCGERF---LQGVAHQTRQEQ--NGAAPGKSIEGRLSVVDSKVKPAESQ 722
BLAST of EWM25370.1 vs. NCBI_GenBank
Match: gi|676399619|ref|XP_009043087.1| (hypothetical protein AURANDRAFT_69090, partial [Aureococcus anophagefferens] >gi|323445760|gb|EGB02214.1| hypothetical protein AURANDRAFT_69090, partial [Aureococcus anophagefferens]) HSP 1 Score: 204.142 bits (518), Expect = 8.922e-56 Identity = 92/200 (46.00%), Postives = 135/200 (67.50%), Query Frame = 0
Query: 2 EAMFWLLEEMTMVVNGFRSFSHEVFRRVIFDEFLGTNEAYIRQHDLMARYFQKMPTCSRNFECLAYHLKAAGLWTKLKEALVDIENFRMWWTPAHKSEFISLWASLT-CRKTFAKYFATARTKSTSDLNHYQGVRAYFDVVDEYVRSLEYYREKQNPRDEDLADVVLRIAEFLLEYAMLGHEDSADVPTFLHPTISHDDL 200
E + +L + T VNG R+FSHE + V+++E++ E ++R H LMARYF K+P C R + L YHL+ +G W +L+ ALVD++ FR+WWTPAHK+EF++LWASLT C A + + Q R D+V+EYVRS++ Y+ +P D++LA V+LRIA+F+LE+A L E++ADVP F+HP+I +DDL
Sbjct: 289 ECIRRVLRDFTFSVNGLRNFSHEDYAAVVYNEYIRVPEVHVRAHQLMARYFGKLPPCDRKLDALPYHLEVSGSWPRLRAALVDVQMFRLWWTPAHKTEFLNLWASLTACSNPGAPIRKLVTGEFDDTMRCTQPPRPCLDIVEEYVRSVDEYKFTHSPSDDELATVILRIADFMLEFATLSLEEAADVPQFIHPSIPNDDL 488
BLAST of EWM25370.1 vs. NCBI_GenBank
Match: gi|298705991|emb|CBJ29112.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 129.028 bits (323), Expect = 3.272e-29 Identity = 55/105 (52.38%), Postives = 73/105 (69.52%), Query Frame = 0
Query: 4 MFWLLEEMTMVVNGFRSFSHEVFRRVIFDEFLGTNEAYIRQHDLMARYFQKMPTCSRNFECLAYHLKAAGLWTKLKEALVDIENFRMWWTPAHKSEFISLWASLT 108
+ +L + TM+V G RSFSHE FR V++ +++ + E +R H MARYF ++P R EC YHL+AAG W KLK LVDI+ F +WWTP HK EF++LWASLT
Sbjct: 292 LLLVLTDNTMLVQGQRSFSHEEFRGVVYSKYIQSPETMVRLHIQMARYFARLPASDRKVECQPYHLEAAGCWNKLKNCLVDIDMFGIWWTPNHKKEFVALWASLT 396 HSP 2 Score: 76.2554 bits (186), Expect = 1.670e-11 Identity = 37/88 (42.05%), Postives = 51/88 (57.95%), Query Frame = 0
Query: 196 SHDDLRSIGVPVLAIDANGEARLTEPRFQGNTEAIMSQTANAPLSPSALAEIANDRKAVSTYFYNRWMWIQFPLVAIANCGERYSLGI 283
++ DL S+GVP L++D +G + L +P E + P P+ D +TYFY+RWMWIQFP VA+ANCGE+Y GI
Sbjct: 399 NNKDLGSLGVPFLSVDEDGRSVLNKPLLTETKEDDKPAGVDQPPKPN------EDFPDCTTYFYHRWMWIQFPWVALANCGEKYLNGI 480
BLAST of EWM25370.1 vs. NCBI_GenBank
Match: gi|325179841|emb|CCA14244.1| (conserved hypothetical protein [Albugo laibachii Nc14]) HSP 1 Score: 97.8265 bits (242), Expect = 1.437e-18 Identity = 74/269 (27.51%), Postives = 120/269 (44.61%), Query Frame = 0
Query: 24 EVFRRVIFDEFLGTNEAYIRQHDLMARYFQKMPTCSRNFECLAYHLKAAGLWTKLKEALVDIENFRMWWTPAHKSEFISLWASLTCRKTFAKYFATARTKSTSDLNHYQGVRA-YFDVVDEYVRSLEYYREKQNPRDEDLADVVLRIAEFLLEYAMLGHEDSADVPTFL-HPTISHDDLRSIGVPVLAIDANGEARLTEPRFQGNTEAIMSQTANAPLSPSALA--------------EIANDRKAVST----YFYNRWMWIQFPLVAI 272
E R +I++ ++G+ E HD++ R+FQ P R E L +HLK W +L+ LV + NF++ +TP +K E SLW L + ++ + V A + D+V EY R LE +R+ P ++ +V +A F+ +++ H + +P F HPT+ DL+ + + + + L R N AN+P PS A + AVS Y Y RW+WI FP +A+
Sbjct: 655 ETLRGIIWERYMGSEEKECYYHDILIRHFQTQPVTFRKVEELPWHLKRCRQWEQLRATLVSLPNFQLLYTPEYKYELFSLWQLLIEGPLSSTVSGASQGQDQVFCKTSPSVGANHMDIVKEYTRHLEEWRKSAKPSTRMISRIVAFLANFMFDFSKYYH--GSLLPEFTSHPTL---DLKRLYLDGMHFVDD----LPHARNLSNETISKYDFANSPSHPSGSAVDKLLPNLIMEQFFKPQCSGTAVSHTNSFYHYQRWVWIHFPWLAL 914
BLAST of EWM25370.1 vs. NCBI_GenBank
Match: gi|673033740|ref|XP_008870831.1| (hypothetical protein H310_07254 [Aphanomyces invadans] >gi|574473693|gb|ETW00696.1| hypothetical protein H310_07254 [Aphanomyces invadans]) HSP 1 Score: 95.5153 bits (236), Expect = 8.404e-18 Identity = 67/256 (26.17%), Postives = 112/256 (43.75%), Query Frame = 0
Query: 21 FSHEVFRRVIFDEFLGTNEAYIRQHDLMARYFQKMPTCSRNFECLAYHLKAAGLWTKLKEALVDIENFRMWWTPAHKSEFISLWASLTCRKTFAKYFATARTKSTSDLNHYQGVRAYFDVVDEYVRSLEYYREKQNPRDEDLADVVLRIAEFLLEYAMLGHEDSADVPTFLH---PTISHDDLRSIGVPVLAIDANGEARLTEPRFQGNTEAIMSQTANAPLSPSALAEIANDRKAVSTYFYNRWMWIQFPLVAIA 273
SH R ++ FL + H +A Y +KMPTC R + L L+ G+W++L+ LV+++ F++WW ++ +F++ W KT YF+T D VD+Y+RSL+ Y E + P E L + L I EFL + + D+ +H P + + S G L+ + E++ + QG + + + YF RW+W QFPL+A++
Sbjct: 486 ISHNQLRLLVRYGFLHDDGLRHGYHKAIASYCEKMPTCQRRIDELPVQLECCGMWSQLQSCLVEMKMFQLWWHERNRQDFLAYW------KTLRSYFST------------------HDPVDDYIRSLDEYIEVEGPSTEQLLSLFLTITEFLRSWQRSDVKVKPDI--HMHRPDPPQLKEFINSQGTFSLSHLTDVESK----QIQGIVDYLCPHPDDG-------------------YFVRRWLWTQFPLIAVS 692
BLAST of EWM25370.1 vs. NCBI_GenBank
Match: gi|698786452|ref|XP_009826258.1| (hypothetical protein, variant [Aphanomyces astaci] >gi|574119086|gb|ETV84566.1| hypothetical protein, variant [Aphanomyces astaci]) HSP 1 Score: 95.5153 bits (236), Expect = 9.239e-18 Identity = 72/255 (28.24%), Postives = 110/255 (43.14%), Query Frame = 0
Query: 21 FSHEVFRRVIFDEFLGTNEAYIRQHDLMARYFQKMPTCSRNFECLAYHLKAAGLWTKLKEALVDIENFRMWWTPAHKSEFISLWASLTCRKTFAKYFATARTKSTSDLNHYQGVRAYFDVVDEYVRSLEYYREKQNPRDEDLADVVLRIAEFLLEYAMLGHEDSADVPTFLHPTISHDDLRSIGVPVLA--IDANGEARLTEPRFQGNTEAIMSQTANAPLSPSALAEIANDRKAVSTYFYNRWMWIQFPLVAIA 273
SH R + FL + H +A Y +KMPTC R + L L+ GLW++L+ LVDI+ F++WW ++ +F++ W KT YF+T D VD+Y+RSL+ Y E + P E L + L I EFL + + V +H + P L I++ G L+ + E+ Q L P +D Y+ RW+W QFPL+A++
Sbjct: 355 ISHNQLRLLARYGFLKDDGLRHGYHKAIASYCEKMPTCQRRIDELPVQLECCGLWSQLQSCLVDIKMFQLWWHERNRQDFLAYW------KTLRSYFST------------------HDPVDDYIRSLDEYIEVEGPSTEQLLSLFLTITEFLRSW----QRNDVKVKPEIH-------MHRPDPPQLKEFINSQGNFSLS---HLTDVESKQIQGIVDYLCPH------HD----DGYYVRRWLWTQFPLIAVS 561
BLAST of EWM25370.1 vs. NCBI_GenBank
Match: gi|698786450|ref|XP_009826257.1| (hypothetical protein H257_03737 [Aphanomyces astaci] >gi|574119085|gb|ETV84565.1| hypothetical protein H257_03737 [Aphanomyces astaci]) HSP 1 Score: 95.1301 bits (235), Expect = 1.120e-17 Identity = 72/255 (28.24%), Postives = 110/255 (43.14%), Query Frame = 0
Query: 21 FSHEVFRRVIFDEFLGTNEAYIRQHDLMARYFQKMPTCSRNFECLAYHLKAAGLWTKLKEALVDIENFRMWWTPAHKSEFISLWASLTCRKTFAKYFATARTKSTSDLNHYQGVRAYFDVVDEYVRSLEYYREKQNPRDEDLADVVLRIAEFLLEYAMLGHEDSADVPTFLHPTISHDDLRSIGVPVLA--IDANGEARLTEPRFQGNTEAIMSQTANAPLSPSALAEIANDRKAVSTYFYNRWMWIQFPLVAIA 273
SH R + FL + H +A Y +KMPTC R + L L+ GLW++L+ LVDI+ F++WW ++ +F++ W KT YF+T D VD+Y+RSL+ Y E + P E L + L I EFL + + V +H + P L I++ G L+ + E+ Q L P +D Y+ RW+W QFPL+A++
Sbjct: 488 ISHNQLRLLARYGFLKDDGLRHGYHKAIASYCEKMPTCQRRIDELPVQLECCGLWSQLQSCLVDIKMFQLWWHERNRQDFLAYW------KTLRSYFST------------------HDPVDDYIRSLDEYIEVEGPSTEQLLSLFLTITEFLRSW----QRNDVKVKPEIH-------MHRPDPPQLKEFINSQGNFSLSH---LTDVESKQIQGIVDYLCPH------HD----DGYYVRRWLWTQFPLIAVS 694
BLAST of EWM25370.1 vs. NCBI_GenBank
Match: gi|635371063|emb|CCI40719.1| (unnamed protein product [Albugo candida]) HSP 1 Score: 95.1301 bits (235), Expect = 1.280e-17 Identity = 73/272 (26.84%), Postives = 120/272 (44.12%), Query Frame = 0
Query: 23 HEVFRRVIFDEFLGTNEAYIRQHDLMARYFQKMPTCSRNFECLAYHLKAAGLWTKLKEALVDIENFRMWWTPAHKSEFISLWASLTCRKTFAKYFATARTKSTSDL--NHYQGVRAYFDVVDEYVRSLEYYREKQNPRDEDLADVVLRIAEFLLEYAMLGHEDSADVPTF-LHPTISHDDLRSI---------------GVPVLAIDA----NGEARLTEPRFQGNTEAIMSQTANAPLSPSALAEIANDRKAVSTYFYNRWMWIQFPLVAI 272
++ R +I+ +LG+ E H+L+ R+FQ P R E L +HL W +L+ LV + NF++ +T +K E SLW L + A D N G Y D+V EY R +E +R+ P + ++ +V +A+F+ E++ H S +P F HPT+ DL+ + +P I + N ++L+EP ++ + P L N Y+Y RW+WI FP +A+
Sbjct: 681 NDTLRGIIWKRYLGSEEQECYYHNLLIRHFQHQPVTFRKIEELPWHLTQCRQWEELRATLVFLPNFQLLYTKEYKIELFSLWQMLIEGPSL---ICGANQIQNQDFCKNPPSGGAIYMDIVKEYARHIEEWRKSTKPSAQMISRIVSFLADFMFEFSAYYHGSS--LPEFSSHPTL---DLKRLYLDGMHFVNDLPHARNLPNENISSYCLTNEFSQLSEPDADKLLPNLIMERFLKPQCSGTLVPQTN-----PFYYYQRWVWIYFPWLAL 939
BLAST of EWM25370.1 vs. NCBI_GenBank
Match: gi|1173949457|gb|OQR97490.1| (hypothetical protein ACHHYP_11003 [Achlya hypogyna]) HSP 1 Score: 90.8929 bits (224), Expect = 2.823e-16 Identity = 67/254 (26.38%), Postives = 113/254 (44.49%), Query Frame = 0
Query: 23 HEVFRRVIFDEFLGTNEAYIRQHDLMARYFQKMPTCSRNFECLAYHLKAAGLWTKLKEALVDIENFRMWWTPAHKSEFISLWASLTCRKTFAKYFATARTKSTSDL---NHYQGVRAYFDVVDEYVRSLEYYREKQNPRDEDLADVVLRIAEFLLEYAMLGHEDSADVPTFLHPTISHDDLRSIGVPVLAIDANGEARLTEPRFQGNTEAIMSQTANAPLSPSALAEIANDRKAVSTYFYNRWMWIQFPLVAIA 273
++ R +++ ++G+ +A H+ + R+F P R E L +HL W LKE LV++ F++ +T +K+E S W +L+ + A A T +++ + + FDVV EY +SL+ + P + L V+ + +FL EY++ D+PTF HP +L S G + Q P +LA+ + D Y Y RW+WIQFP +A+
Sbjct: 608 YDALRDLVYWRYIGSPKAEQAYHNWLVRFFICHPPTFRRVEELPWHLTFCRRWHALKEVLVNLPMFQLLFTANYKTELFSYWKTLSEGSVVSG--AVAPTTEAAEMCADDKRKANIVTFDVVREYNKSLDDWYHSARPSTKQLLPVLQTMTKFLFEYSVFSQ---MDLPTFNHPIFDLKELASSGF-----------------------HFVQQL------PHSLAQQSLDPTVHHFYLYQRWIWIQFPWLALG 827 The following BLAST results are available for this feature:
BLAST of EWM25370.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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