EWM25370.1, cds5237 (CDS) Nannochloropsis gaditana

Overview
NameEWM25370.1
Unique Namecds5237
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002465.1:533287..533342 +
Alignment locationCM002465.1:533419..533758 +
Alignment locationCM002465.1:534060..534719 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM25370.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100005g37.6664.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002465.1supercontigCM002465.1:533287..533342 +
CM002465.1supercontigCM002465.1:533419..533758 +
CM002465.1supercontigCM002465.1:534060..534719 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
BLAST of EWM25370.1 vs. NCBI_GenBank
Match: gi|585107131|gb|EWM25370.1| (hypothetical protein Naga_100005g37 [Nannochloropsis gaditana])

HSP 1 Score: 739.184 bits (1907), Expect = 0.000e+0
Identity = 351/351 (100.00%), Postives = 351/351 (100.00%), Query Frame = 0
Query:    1 MEAMFWLLEEMTMVVNGFRSFSHEVFRRVIFDEFLGTNEAYIRQHDLMARYFQKMPTCSRNFECLAYHLKAAGLWTKLKEALVDIENFRMWWTPAHKSEFISLWASLTCRKTFAKYFATARTKSTSDLNHYQGVRAYFDVVDEYVRSLEYYREKQNPRDEDLADVVLRIAEFLLEYAMLGHEDSADVPTFLHPTISHDDLRSIGVPVLAIDANGEARLTEPRFQGNTEAIMSQTANAPLSPSALAEIANDRKAVSTYFYNRWMWIQFPLVAIANCGERYSLGIRSVRHFEGQDQPSSDVCIAESADTLMGVDENKAVKSETERKMYLRTGDEESVQKVCRISDKLPQYDNI 351
            MEAMFWLLEEMTMVVNGFRSFSHEVFRRVIFDEFLGTNEAYIRQHDLMARYFQKMPTCSRNFECLAYHLKAAGLWTKLKEALVDIENFRMWWTPAHKSEFISLWASLTCRKTFAKYFATARTKSTSDLNHYQGVRAYFDVVDEYVRSLEYYREKQNPRDEDLADVVLRIAEFLLEYAMLGHEDSADVPTFLHPTISHDDLRSIGVPVLAIDANGEARLTEPRFQGNTEAIMSQTANAPLSPSALAEIANDRKAVSTYFYNRWMWIQFPLVAIANCGERYSLGIRSVRHFEGQDQPSSDVCIAESADTLMGVDENKAVKSETERKMYLRTGDEESVQKVCRISDKLPQYDNI
Sbjct:    1 MEAMFWLLEEMTMVVNGFRSFSHEVFRRVIFDEFLGTNEAYIRQHDLMARYFQKMPTCSRNFECLAYHLKAAGLWTKLKEALVDIENFRMWWTPAHKSEFISLWASLTCRKTFAKYFATARTKSTSDLNHYQGVRAYFDVVDEYVRSLEYYREKQNPRDEDLADVVLRIAEFLLEYAMLGHEDSADVPTFLHPTISHDDLRSIGVPVLAIDANGEARLTEPRFQGNTEAIMSQTANAPLSPSALAEIANDRKAVSTYFYNRWMWIQFPLVAIANCGERYSLGIRSVRHFEGQDQPSSDVCIAESADTLMGVDENKAVKSETERKMYLRTGDEESVQKVCRISDKLPQYDNI 351          
BLAST of EWM25370.1 vs. NCBI_GenBank
Match: gi|676393737|ref|XP_009040146.1| (hypothetical protein AURANDRAFT_66563 [Aureococcus anophagefferens] >gi|323449356|gb|EGB05245.1| hypothetical protein AURANDRAFT_66563 [Aureococcus anophagefferens])

HSP 1 Score: 267.314 bits (682), Expect = 9.499e-77
Identity = 132/322 (40.99%), Postives = 202/322 (62.73%), Query Frame = 0
Query:    2 EAMFWLLEEMTMVVNGFRSFSHEVFRRVIFDEFLGTNEAYIRQHDLMARYFQKMPTCSRNFECLAYHLKAAGLWTKLKEALVDIENFRMWWTPAHKSEFISLWASLT-CRKTFAKYFATARTKSTSDLNHYQGVRAYFDVVDEYVRSLEYYREKQNPRDEDLADVVLRIAEFLLEYAMLGHEDSADVPTFLHPTISHDDLRSIGVPVLAIDANGEARLTEPRFQGNTEAIMSQTANAPLSPSALAEIANDRKAVSTYFYNRWMWIQFPLVAIANCGERYSLGIRSVRHFEGQDQPSSDVCIAESADTLMGVDENKAVKSETE 322
            E +  +L + T  VNG R+FSHE +  V+++E++ + E ++R H LMARYF K+P C R  + L YHL+ +G W++L+ ALVD++ FR+WWT AHK+EF++LWASLT C  T A        +    +   Q  R   DVVDEYVRS++ Y+   +P D++LA V+L IA+F+LE+A L  E++ADVP F+HPTI ++DL S+GVP L+ D +G + L  P  + +T+         P +     ++  +    STYFY+RWMWIQFP V++ANCGER+   ++ V H   Q+Q  +     +S +  + V ++K   +E++
Sbjct:  408 ECIRRVLRDYTFSVNGLRNFSHEDYAVVVYNEYIRSPEVHVRAHQLMARYFGKLPPCDRKLDALPYHLEVSGSWSRLRAALVDVQMFRLWWTAAHKTEFLNLWASLTACSNTGAPIRKLVTGEFDDTMRCAQPPRPCLDVVDEYVRSVDDYKFVHSPSDDELASVILHIADFMLEFATLSLEEAADVPQFVHPTIPNEDLASLGVPFLSRDKDGNSVLNTPHVEASTDK--GSLGAKPTAMDTPMKVNEEIPLCSTYFYHRWMWIQFPWVSLANCGERF---LQGVAHQTRQEQ--NGAAPGKSIEGRLSVVDSKVKPAESQ 722          
BLAST of EWM25370.1 vs. NCBI_GenBank
Match: gi|676399619|ref|XP_009043087.1| (hypothetical protein AURANDRAFT_69090, partial [Aureococcus anophagefferens] >gi|323445760|gb|EGB02214.1| hypothetical protein AURANDRAFT_69090, partial [Aureococcus anophagefferens])

HSP 1 Score: 204.142 bits (518), Expect = 8.922e-56
Identity = 92/200 (46.00%), Postives = 135/200 (67.50%), Query Frame = 0
Query:    2 EAMFWLLEEMTMVVNGFRSFSHEVFRRVIFDEFLGTNEAYIRQHDLMARYFQKMPTCSRNFECLAYHLKAAGLWTKLKEALVDIENFRMWWTPAHKSEFISLWASLT-CRKTFAKYFATARTKSTSDLNHYQGVRAYFDVVDEYVRSLEYYREKQNPRDEDLADVVLRIAEFLLEYAMLGHEDSADVPTFLHPTISHDDL 200
            E +  +L + T  VNG R+FSHE +  V+++E++   E ++R H LMARYF K+P C R  + L YHL+ +G W +L+ ALVD++ FR+WWTPAHK+EF++LWASLT C    A        +    +   Q  R   D+V+EYVRS++ Y+   +P D++LA V+LRIA+F+LE+A L  E++ADVP F+HP+I +DDL
Sbjct:  289 ECIRRVLRDFTFSVNGLRNFSHEDYAAVVYNEYIRVPEVHVRAHQLMARYFGKLPPCDRKLDALPYHLEVSGSWPRLRAALVDVQMFRLWWTPAHKTEFLNLWASLTACSNPGAPIRKLVTGEFDDTMRCTQPPRPCLDIVEEYVRSVDEYKFTHSPSDDELATVILRIADFMLEFATLSLEEAADVPQFIHPSIPNDDL 488          
BLAST of EWM25370.1 vs. NCBI_GenBank
Match: gi|298705991|emb|CBJ29112.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 129.028 bits (323), Expect = 3.272e-29
Identity = 55/105 (52.38%), Postives = 73/105 (69.52%), Query Frame = 0
Query:    4 MFWLLEEMTMVVNGFRSFSHEVFRRVIFDEFLGTNEAYIRQHDLMARYFQKMPTCSRNFECLAYHLKAAGLWTKLKEALVDIENFRMWWTPAHKSEFISLWASLT 108
            +  +L + TM+V G RSFSHE FR V++ +++ + E  +R H  MARYF ++P   R  EC  YHL+AAG W KLK  LVDI+ F +WWTP HK EF++LWASLT
Sbjct:  292 LLLVLTDNTMLVQGQRSFSHEEFRGVVYSKYIQSPETMVRLHIQMARYFARLPASDRKVECQPYHLEAAGCWNKLKNCLVDIDMFGIWWTPNHKKEFVALWASLT 396          

HSP 2 Score: 76.2554 bits (186), Expect = 1.670e-11
Identity = 37/88 (42.05%), Postives = 51/88 (57.95%), Query Frame = 0
Query:  196 SHDDLRSIGVPVLAIDANGEARLTEPRFQGNTEAIMSQTANAPLSPSALAEIANDRKAVSTYFYNRWMWIQFPLVAIANCGERYSLGI 283
            ++ DL S+GVP L++D +G + L +P      E       + P  P+       D    +TYFY+RWMWIQFP VA+ANCGE+Y  GI
Sbjct:  399 NNKDLGSLGVPFLSVDEDGRSVLNKPLLTETKEDDKPAGVDQPPKPN------EDFPDCTTYFYHRWMWIQFPWVALANCGEKYLNGI 480          
BLAST of EWM25370.1 vs. NCBI_GenBank
Match: gi|325179841|emb|CCA14244.1| (conserved hypothetical protein [Albugo laibachii Nc14])

HSP 1 Score: 97.8265 bits (242), Expect = 1.437e-18
Identity = 74/269 (27.51%), Postives = 120/269 (44.61%), Query Frame = 0
Query:   24 EVFRRVIFDEFLGTNEAYIRQHDLMARYFQKMPTCSRNFECLAYHLKAAGLWTKLKEALVDIENFRMWWTPAHKSEFISLWASLTCRKTFAKYFATARTKSTSDLNHYQGVRA-YFDVVDEYVRSLEYYREKQNPRDEDLADVVLRIAEFLLEYAMLGHEDSADVPTFL-HPTISHDDLRSIGVPVLAIDANGEARLTEPRFQGNTEAIMSQTANAPLSPSALA--------------EIANDRKAVST----YFYNRWMWIQFPLVAI 272
            E  R +I++ ++G+ E     HD++ R+FQ  P   R  E L +HLK    W +L+  LV + NF++ +TP +K E  SLW  L      +     ++ +          V A + D+V EY R LE +R+   P    ++ +V  +A F+ +++   H   + +P F  HPT+   DL+ + +  +    +    L   R   N        AN+P  PS  A              +      AVS     Y Y RW+WI FP +A+
Sbjct:  655 ETLRGIIWERYMGSEEKECYYHDILIRHFQTQPVTFRKVEELPWHLKRCRQWEQLRATLVSLPNFQLLYTPEYKYELFSLWQLLIEGPLSSTVSGASQGQDQVFCKTSPSVGANHMDIVKEYTRHLEEWRKSAKPSTRMISRIVAFLANFMFDFSKYYH--GSLLPEFTSHPTL---DLKRLYLDGMHFVDD----LPHARNLSNETISKYDFANSPSHPSGSAVDKLLPNLIMEQFFKPQCSGTAVSHTNSFYHYQRWVWIHFPWLAL 914          
BLAST of EWM25370.1 vs. NCBI_GenBank
Match: gi|673033740|ref|XP_008870831.1| (hypothetical protein H310_07254 [Aphanomyces invadans] >gi|574473693|gb|ETW00696.1| hypothetical protein H310_07254 [Aphanomyces invadans])

HSP 1 Score: 95.5153 bits (236), Expect = 8.404e-18
Identity = 67/256 (26.17%), Postives = 112/256 (43.75%), Query Frame = 0
Query:   21 FSHEVFRRVIFDEFLGTNEAYIRQHDLMARYFQKMPTCSRNFECLAYHLKAAGLWTKLKEALVDIENFRMWWTPAHKSEFISLWASLTCRKTFAKYFATARTKSTSDLNHYQGVRAYFDVVDEYVRSLEYYREKQNPRDEDLADVVLRIAEFLLEYAMLGHEDSADVPTFLH---PTISHDDLRSIGVPVLAIDANGEARLTEPRFQGNTEAIMSQTANAPLSPSALAEIANDRKAVSTYFYNRWMWIQFPLVAIA 273
             SH   R ++   FL  +      H  +A Y +KMPTC R  + L   L+  G+W++L+  LV+++ F++WW   ++ +F++ W      KT   YF+T                   D VD+Y+RSL+ Y E + P  E L  + L I EFL  +     +   D+   +H   P    + + S G   L+   + E++    + QG  + +     +                    YF  RW+W QFPL+A++
Sbjct:  486 ISHNQLRLLVRYGFLHDDGLRHGYHKAIASYCEKMPTCQRRIDELPVQLECCGMWSQLQSCLVEMKMFQLWWHERNRQDFLAYW------KTLRSYFST------------------HDPVDDYIRSLDEYIEVEGPSTEQLLSLFLTITEFLRSWQRSDVKVKPDI--HMHRPDPPQLKEFINSQGTFSLSHLTDVESK----QIQGIVDYLCPHPDDG-------------------YFVRRWLWTQFPLIAVS 692          
BLAST of EWM25370.1 vs. NCBI_GenBank
Match: gi|698786452|ref|XP_009826258.1| (hypothetical protein, variant [Aphanomyces astaci] >gi|574119086|gb|ETV84566.1| hypothetical protein, variant [Aphanomyces astaci])

HSP 1 Score: 95.5153 bits (236), Expect = 9.239e-18
Identity = 72/255 (28.24%), Postives = 110/255 (43.14%), Query Frame = 0
Query:   21 FSHEVFRRVIFDEFLGTNEAYIRQHDLMARYFQKMPTCSRNFECLAYHLKAAGLWTKLKEALVDIENFRMWWTPAHKSEFISLWASLTCRKTFAKYFATARTKSTSDLNHYQGVRAYFDVVDEYVRSLEYYREKQNPRDEDLADVVLRIAEFLLEYAMLGHEDSADVPTFLHPTISHDDLRSIGVPVLA--IDANGEARLTEPRFQGNTEAIMSQTANAPLSPSALAEIANDRKAVSTYFYNRWMWIQFPLVAIA 273
             SH   R +    FL  +      H  +A Y +KMPTC R  + L   L+  GLW++L+  LVDI+ F++WW   ++ +F++ W      KT   YF+T                   D VD+Y+RSL+ Y E + P  E L  + L I EFL  +      +   V   +H       +     P L   I++ G   L+      + E+   Q     L P       +D      Y+  RW+W QFPL+A++
Sbjct:  355 ISHNQLRLLARYGFLKDDGLRHGYHKAIASYCEKMPTCQRRIDELPVQLECCGLWSQLQSCLVDIKMFQLWWHERNRQDFLAYW------KTLRSYFST------------------HDPVDDYIRSLDEYIEVEGPSTEQLLSLFLTITEFLRSW----QRNDVKVKPEIH-------MHRPDPPQLKEFINSQGNFSLS---HLTDVESKQIQGIVDYLCPH------HD----DGYYVRRWLWTQFPLIAVS 561          
BLAST of EWM25370.1 vs. NCBI_GenBank
Match: gi|698786450|ref|XP_009826257.1| (hypothetical protein H257_03737 [Aphanomyces astaci] >gi|574119085|gb|ETV84565.1| hypothetical protein H257_03737 [Aphanomyces astaci])

HSP 1 Score: 95.1301 bits (235), Expect = 1.120e-17
Identity = 72/255 (28.24%), Postives = 110/255 (43.14%), Query Frame = 0
Query:   21 FSHEVFRRVIFDEFLGTNEAYIRQHDLMARYFQKMPTCSRNFECLAYHLKAAGLWTKLKEALVDIENFRMWWTPAHKSEFISLWASLTCRKTFAKYFATARTKSTSDLNHYQGVRAYFDVVDEYVRSLEYYREKQNPRDEDLADVVLRIAEFLLEYAMLGHEDSADVPTFLHPTISHDDLRSIGVPVLA--IDANGEARLTEPRFQGNTEAIMSQTANAPLSPSALAEIANDRKAVSTYFYNRWMWIQFPLVAIA 273
             SH   R +    FL  +      H  +A Y +KMPTC R  + L   L+  GLW++L+  LVDI+ F++WW   ++ +F++ W      KT   YF+T                   D VD+Y+RSL+ Y E + P  E L  + L I EFL  +      +   V   +H       +     P L   I++ G   L+      + E+   Q     L P       +D      Y+  RW+W QFPL+A++
Sbjct:  488 ISHNQLRLLARYGFLKDDGLRHGYHKAIASYCEKMPTCQRRIDELPVQLECCGLWSQLQSCLVDIKMFQLWWHERNRQDFLAYW------KTLRSYFST------------------HDPVDDYIRSLDEYIEVEGPSTEQLLSLFLTITEFLRSW----QRNDVKVKPEIH-------MHRPDPPQLKEFINSQGNFSLSH---LTDVESKQIQGIVDYLCPH------HD----DGYYVRRWLWTQFPLIAVS 694          
BLAST of EWM25370.1 vs. NCBI_GenBank
Match: gi|635371063|emb|CCI40719.1| (unnamed protein product [Albugo candida])

HSP 1 Score: 95.1301 bits (235), Expect = 1.280e-17
Identity = 73/272 (26.84%), Postives = 120/272 (44.12%), Query Frame = 0
Query:   23 HEVFRRVIFDEFLGTNEAYIRQHDLMARYFQKMPTCSRNFECLAYHLKAAGLWTKLKEALVDIENFRMWWTPAHKSEFISLWASLTCRKTFAKYFATARTKSTSDL--NHYQGVRAYFDVVDEYVRSLEYYREKQNPRDEDLADVVLRIAEFLLEYAMLGHEDSADVPTF-LHPTISHDDLRSI---------------GVPVLAIDA----NGEARLTEPRFQGNTEAIMSQTANAPLSPSALAEIANDRKAVSTYFYNRWMWIQFPLVAI 272
            ++  R +I+  +LG+ E     H+L+ R+FQ  P   R  E L +HL     W +L+  LV + NF++ +T  +K E  SLW  L    +       A      D   N   G   Y D+V EY R +E +R+   P  + ++ +V  +A+F+ E++   H  S  +P F  HPT+   DL+ +                +P   I +    N  ++L+EP        ++ +    P     L    N       Y+Y RW+WI FP +A+
Sbjct:  681 NDTLRGIIWKRYLGSEEQECYYHNLLIRHFQHQPVTFRKIEELPWHLTQCRQWEELRATLVFLPNFQLLYTKEYKIELFSLWQMLIEGPSL---ICGANQIQNQDFCKNPPSGGAIYMDIVKEYARHIEEWRKSTKPSAQMISRIVSFLADFMFEFSAYYHGSS--LPEFSSHPTL---DLKRLYLDGMHFVNDLPHARNLPNENISSYCLTNEFSQLSEPDADKLLPNLIMERFLKPQCSGTLVPQTN-----PFYYYQRWVWIYFPWLAL 939          
BLAST of EWM25370.1 vs. NCBI_GenBank
Match: gi|1173949457|gb|OQR97490.1| (hypothetical protein ACHHYP_11003 [Achlya hypogyna])

HSP 1 Score: 90.8929 bits (224), Expect = 2.823e-16
Identity = 67/254 (26.38%), Postives = 113/254 (44.49%), Query Frame = 0
Query:   23 HEVFRRVIFDEFLGTNEAYIRQHDLMARYFQKMPTCSRNFECLAYHLKAAGLWTKLKEALVDIENFRMWWTPAHKSEFISLWASLTCRKTFAKYFATARTKSTSDL---NHYQGVRAYFDVVDEYVRSLEYYREKQNPRDEDLADVVLRIAEFLLEYAMLGHEDSADVPTFLHPTISHDDLRSIGVPVLAIDANGEARLTEPRFQGNTEAIMSQTANAPLSPSALAEIANDRKAVSTYFYNRWMWIQFPLVAIA 273
            ++  R +++  ++G+ +A    H+ + R+F   P   R  E L +HL     W  LKE LV++  F++ +T  +K+E  S W +L+     +   A A T   +++   +  +     FDVV EY +SL+ +     P  + L  V+  + +FL EY++       D+PTF HP     +L S G                          + Q       P +LA+ + D      Y Y RW+WIQFP +A+ 
Sbjct:  608 YDALRDLVYWRYIGSPKAEQAYHNWLVRFFICHPPTFRRVEELPWHLTFCRRWHALKEVLVNLPMFQLLFTANYKTELFSYWKTLSEGSVVSG--AVAPTTEAAEMCADDKRKANIVTFDVVREYNKSLDDWYHSARPSTKQLLPVLQTMTKFLFEYSVFSQ---MDLPTFNHPIFDLKELASSGF-----------------------HFVQQL------PHSLAQQSLDPTVHHFYLYQRWIWIQFPWLALG 827          
The following BLAST results are available for this feature:
BLAST of EWM25370.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585107131|gb|EWM25370.1|0.000e+0100.00hypothetical protein Naga_100005g37 [Nannochlorops... [more]
gi|676393737|ref|XP_009040146.1|9.499e-7740.99hypothetical protein AURANDRAFT_66563 [Aureococcus... [more]
gi|676399619|ref|XP_009043087.1|8.922e-5646.00hypothetical protein AURANDRAFT_69090, partial [Au... [more]
gi|298705991|emb|CBJ29112.1|3.272e-2952.38conserved unknown protein [Ectocarpus siliculosus][more]
gi|325179841|emb|CCA14244.1|1.437e-1827.51conserved hypothetical protein [Albugo laibachii N... [more]
gi|673033740|ref|XP_008870831.1|8.404e-1826.17hypothetical protein H310_07254 [Aphanomyces invad... [more]
gi|698786452|ref|XP_009826258.1|9.239e-1828.24hypothetical protein, variant [Aphanomyces astaci]... [more]
gi|698786450|ref|XP_009826257.1|1.120e-1728.24hypothetical protein H257_03737 [Aphanomyces astac... [more]
gi|635371063|emb|CCI40719.1|1.280e-1726.84unnamed protein product [Albugo candida][more]
gi|1173949457|gb|OQR97490.1|2.823e-1626.38hypothetical protein ACHHYP_11003 [Achlya hypogyna... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna5250rna5250Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications