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Properties
| Property Name | Value |
| Product | ddb1- and cul4-associated factor |
| Orig transcript id | gnl|cribi|Naga_100005g36.6734.mrna |
| Orig protein id | gnl|cribi|Naga_100005g36.6734 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
| CM002465.1 | supercontig | CM002465.1:529407..531199 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna5249 ID=rna5249|Name=rna5249|organism=Nannochloropsis gaditana|type=mRNA|length=2625bp ATGCATGATTTGAGACCACCACGTTTGAAAAGTGCTGTGTTAGCACTATC AGTATTAATTTTTCTACATATCCAATTGGGAGTTCACGCTGGCCCAACCT GCCGCTCAAGAAGAGCAAGCGGCTCCCTCAGATCACCATCCGCGCCCTTG TCTTTCCACGGCCCCTGCTCTTCCTCGTACTCTCATCTAAGGAGTTGGAC CGACCGCTCTTTCGAAGACCCTTTAAGCATACAGCATCGTTGCTGGAAAA GTGGTGAGAATGAGAGAATAAGAGGCAGTTGCGAGTTCAAGCGCGGCCGC AAGGGAGACCTGTCGATGACGATGATGGAGGGTGAGGAGGGTCGGCTTTC TCTTGGGGCACCTCGGTACAGACCGCTTTCGGGCAGATTCATAACGAAAG GGGGTGTCCAAGTGACATGTCAAGTCGAGGACGTGTCAGACACTGGCAAG GAGGTCGACGCCTTGCTAGAGGGCCTCGACTCTCATGAGGGGGTGCTGCT GGCATCCTCTTATGAATTCCCCGGCCGATATGCGCGATGGACCATTGGCT TCATCGATCCTCCCCTTAAAATTGAAAGCCGGGGTCTAAACTTTAAGGTG AAGGCATTGAATGCACGTGGAGAGGTGCTGTTGGAGGTTATTCAAGACGC GCTCGAGCGGCCGGACTCGTCATTGGCTCTGGCCAGCTTGGAACGCACCG GTCACCCAGCTGGTGAAGATGGCGGGACGGTTCTTTCTGGGCAAGTGCCC AAGTCAGACGAATACTTCCCCGAAGAAGAGCGTTCGCGGCAGCCAAGCAT CTTTAGCGTAATCCGCACCTTGGTGGACTTTTTTCAGAGCGACGGGGACC CACAGTTGGGCTTGTACGGGACCTTCGGGTACGACTTGACTTTCCAGTTT GAACCCATCAAACTGCGCATGCCGCGGTCAGACAATCAACGAGACGTGGT ACTGTACTTGCCCGACCGAGTCTTGGTGGTCGACCAGGACAAGCGCGCGG CCTGGCGGGTGGAGTATGACTTCAGCTGGAACGGCCGGAGCACGCAAGGG CTTGCCCGGACGGGTAGGGTCTTGGAGTACCGAGCTGCGCCTGCGGAGGC CCTGAAGCGGGACCGTGATAGCCCGGTTGGGGAATACGCGCGGCGGGTGG CGATGGCGAAGGACCAGTTCAAGGTAGGGAACTTGTTCGAGGTGGTGCTC AGCCAGACCTTCTTCAAGGAGTGTCCCTCTGCACCTTCGCGAGTCTTTTC CCGCCTGCGCACCACTAATCCCTCTCCTTACGGCTTTCTCATCAACTTGG GGGACGGTGAGTACCTGATCGGGGCCTCGCCTGAGATGTTCGTGCGCTGT GAGCAAACGAAGGCCGGCCTTCGGGTTGAGACTTGTCCCATCTCCGGGAC AATAGCTCGAGGCAGCGACGCCCTGGAGGACGCGGCCAGGATCAAGGCGA TTCTAACCAACCCGAAGGAGGAGTCGGAGCTGACCATGTGCACGGACGTG GACCGGAATGACAAGAGTCGTATTTGTGAGCCCGGCTCGGTGCGCGTGCT CGGGCGGCGGCAAATTGAGATGTACTCGCGGCTGATCCATACCGTAGACC ACGTCGAGGGCTATTTGCGCAGGGGCTTCGACGCGCTGGACGCTTTCCTG TGTCATACTTGGGCCGTCACGGTCACGGGCGCGCCCAAGACCTGGGCCAT CCAGTTCATCGAGGACCAGGAGGCATCGCCCCGGGCCTGGTACGGCGGGG CCGTAGGGCTCGTAGCCTTCGACGGCTCCCTGAACACCGGCCTCACCCTG CGGACGATCCGTCTCTTAAATGGCATTGCCGAGGTGCGGGCGGGAGCCAC GCTCTTGTATGACAGCGACCCACCTGCGGAAGAGGCTGAGACAGAGCTGA AAGCCTCGGCGCTGATAGACGCCTTGGCCTGCGAAAGCTCTGAGACCGCG GGTGTCACTGGAGAAGAGGCGGCTCAGGCCGCCGATGAGGCTCGACGGGT GCTGTTAGTCGACCATCAGGATTCCTTCGTGCACACTCTTGCCAATTATC TTCGACAAACGGGCGCGGATGTTAGCACGGTTCGTAGTGGGCCAAATGCC CTTAGGCTAATACGAAACACCAAGCCCGACCTCCTGGTTCTGTCCCCCGG TCCTGGATGCCCGGCCGACTTTCACCTTTCCGATACAATCGACGCCGCCT TGGCTTCGCGTGTGCCTGTTTTTGGCGTCTGCCTTGGGTTACAGGGCATG GTCGAGCATTTCGGCGGACAACTAGACGTGCTGGCTTACCCCATGCACGG TAAGCCTTCTACGGTAAAGCTGACCCCTGCTGCTGCCACGGGAGGGGACG TTCTAGGCCATAGATACAAGATATTTGAGGGTTTGCCTCGTTGCTTTGAC GTCGCACGCTATCACTCGCTACACGGAAAGAAAGCGGGCTTTCCGCAAGA CTTGCGTGTGACAGCCATGAGCGAGGACGGAGTTATCATGGGCATCGAGC ACCGAGAGCTGCCTTTCGCCGCTGTTCAGTTTCATCCCGAGTCAATCTTG ACTAATCCCAAGCATGGATTGCGCATGCTTGCCAATGCTGTAAAATACTT GGTGTTTGAGGATCCGAAAGAATAA back to topprotein sequence of rna5249 >rna5249-protein ID=rna5249-protein|Name=rna5249|organism=Nannochloropsis gaditana|type=polypeptide|length=476bp MKIKTLSRCEETFTRECKGDVVKVFRNLDPALHPFDKAREYTRALQATKL DKLFAKPFIGALDGHADGVFCSALSKRNLVQFLTGACDGEVRVWDLNVRK CVWRAYAHAGFVRGLSVAPGGGTFFSCGDKTVKQWTLCVADDSRQEPAAL NTWLHSETLTSIDHHWRNAHFATAADTRVLVWDHARSNPVQSFSWGCDAI SCVRYNPAERSLLASTGSDRAVTLFDTREGAAMRKAVLVMRSNALAWNPQ EPLNFTVASEDHNLYTFDLRKLDQAKLIHKDHVGAVMDLAFSPTGQEFVT GSYDRTVRIFGHREGRSREVYHTKRMQRVFCVNFSGDGRFVLTGSDDTNL RIWKAEASQQLGVKVPRAEKKLEYEEALKKRYQHMPEVRRIAKHRHRAND AKLKIAGSMQEKIAKIVNLCQSANRRLWRRFHRCPRAATHVVYSLIFVKH YIELERGMSLHYIALEHIFFKFVPIC back to topmRNA from alignment at CM002465.1:529407..531199- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna5249 ID=rna5249|Name=rna5249|organism=Nannochloropsis gaditana|type=mRNA|length=1793bp|location=Sequence derived from alignment at CM002465.1:529407..531199- (Nannochloropsis gaditana) ATGAAGATCAAGACACTCAGTCGATGTGAAGAGACTTTCACAAGGGAGTG
CAAAGGAGATGTCGTCAAGGTTTTTCGAAATCTGGATCCCGCCCTACATC
CTTTTGACAAAGCCCGGGAATATACTCGCGCCCTTCAAGCGACTAAGCTG
GATAAGCTGTTTGCCAAACCATTTATCGGTACGTTGACGGACCATGAAAT
GTCTTTGGTGAGATATTTAGGAGCATAGTTTCAATGGCACATTTTGATTG
CTCCTGATCCTTAATTTTTAGCACCTTAGCTGGTGCAGCATGTAGTGTCC
GCTAGTTTAACGTGTTAGCTGCATATGTGTAAAATGTCATACCTCCTTCC
GCAAGTTAGAAATTGTTTTTTTTACATCTTTGAATTTTTTACAGGTGCAT
TGGATGGCCACGCAGATGGTGTATTTTGCTCTGCTCTTAGCAAACGAAAT
TTGGTTCAGTTCTTAACAGGAGCTTGTGACGGTGAGGTGCGAGTATGGGA
TTTAAATGTGCGCAAATGTGTGTGGCGTGCGTATGCACACGCAGGTTTCG
TCAGAGGTCTTTCTGTAGCACCCGGTGGGGGAACTTTTTTCTCTTGCGGA
GACAAGACAGTCAAGCAATGGACATTATGCGTCGCAGACGACTCCAGACA
GGTCTGTGCTTTAGATTTCGACGCATCCGCCATTTCAATTCAAATAGTCA
ATTTACCAATTTCCTTGGTACTCGATGATATGCCGATCGACACGACAGGA
ACCCGCGGCTCTCAATACGTGGCTCCACAGTGAGACACTGACATCCATTG
ATCATCACTGGCGCAACGCACATTTCGCCACGGCGGCTGACACCCGCGTT
TTGGTGTGGGACCATGCACGTTCGAATCCCGTTCAATCATTTTCGTGGGG
ATGCGATGCCATCTCCTGCGTGCGATACAATCCCGCTGAGCGCTCGCTTC
TGGCCAGCACGGGATCGGACCGGGCGGTCACGCTCTTCGACACGCGCGAG
GGTGCGGCTATGCGGAAGGCCGTGCTTGTCATGCGCTCGAACGCACTGGC
CTGGAATCCGCAAGAACCCTTGAATTTCACAGTTGCCAGCGAGGACCACA
ATCTCTATACTTTCGATCTCCGAAAGCTTGACCAAGCCAAGCTCATCCAC
AAGGATCACGTGGGCGCCGTCATGGACCTCGCCTTCTCACCTACAGGTCA
AGAATTCGTCACCGGCTCATACGATCGCACCGTGCGTATTTTTGGTCACA
GAGAAGGCCGGAGCCGTGAGGTTTATCACACCAAACGTATGCAGCGCGTC
TTCTGCGTCAATTTTTCGGGGGACGGCCGCTTCGTGCTCACGGGCTCTGA
CGACACCAACCTCCGAATATGGAAGGCAGAAGCCTCACAGCAACTTGGAG
TGAAAGTTCCTCGGGCAGAGAAGAAGTTGGAGTACGAGGAAGCGTTGAAA
AAGCGCTATCAACACATGCCTGAGGTGCGGCGCATCGCTAAACACCGGCA
CGTGCCGAAGGCCATTATGAAGGCCCGCGAGACGCTTCACATGCAACAAG
AGAGCCAACGACGCAAAGCTCAAAATCGCAGGAAGCATGCAAGAAAAGAT
AGCGAAGATAGTAAATTTGTGCCAGAGCGCAAACAGAAGGTTGTGGCGGA
GATTTCATAGATGTCCACGCGCTGCAACGCATGTCGTGTACAGCTTGATT
TTTGTAAAACATTACATTGAATTAGAACGAGGCATGTCACTTCATTATAT
CGCATTGGAACATATATTTTTTAAATTCGTGCCGATATGTTGA back to topCoding sequence (CDS) from alignment at CM002465.1:529407..531199- >rna5249 ID=rna5249|Name=rna5249|organism=Nannochloropsis gaditana|type=CDS|length=5724bp|location=Sequence derived from alignment at CM002465.1:529407..531199- (Nannochloropsis gaditana) AGAGCCAACGACGCAAAGCTCAAAATCGCAGGAAGCATGCAAGAAAAGAT AGCGAAGATAGTAAATTTGTGCCAGAGCGCAAACAGAAGGTTGTGGCGGA GATTTCATAGATGTCCACGCGCTGCAACGCATGTCGTGTACAGCTTGATT TTTGTAAAACATTACATTGAATTAGAACGAGGCATGTCACTTCATTATAT CGCATTGGAACATATATTTTTTAAATTCGTGCCGATATGTTGAGAACCCG CGGCTCTCAATACGTGGCTCCACAGTGAGACACTGACATCCATTGATCAT CACTGGCGCAACGCACATTTCGCCACGGCGGCTGACACCCGCGTTTTGGT GTGGGACCATGCACGTTCGAATCCCGTTCAATCATTTTCGTGGGGATGCG ATGCCATCTCCTGCGTGCGATACAATCCCGCTGAGCGCTCGCTTCTGGCC AGCACGGGATCGGACCGGGCGGTCACGCTCTTCGACACGCGCGAGGGTGC GGCTATGCGGAAGGCCGTGCTTGTCATGCGCTCGAACGCACTGGCCTGGA ATCCGCAAGAACCCTTGAATTTCACAGTTGCCAGCGAGGACCACAATCTC TATACTTTCGATCTCCGAAAGCTTGACCAAGCCAAGCTCATCCACAAGGA TCACGTGGGCGCCGTCATGGACCTCGCCTTCTCACCTACAGGTCAAGAAT TCGTCACCGGCTCATACGATCGCACCGTGCGTATTTTTGGTCACAGAGAA GGCCGGAGCCGTGAGGTTTATCACACCAAACGTATGCAGCGCGTCTTCTG CGTCAATTTTTCGGGGGACGGCCGCTTCGTGCTCACGGGCTCTGACGACA CCAACCTCCGAATATGGAAGGCAGAAGCCTCACAGCAACTTGGAGTGAAA GTTCCTCGGGCAGAGAAGAAGTTGGAGTACGAGGAAGCGTTGAAAAAGCG CTATCAACACATGCCTGAGGTGCGGCGCATCGCTAAACACCGGCACGTGC ATTGGATGGCCACGCAGATGGTGTATTTTGCTCTGCTCTTAGCAAACGAA ATTTGGTTCAGTTCTTAACAGGAGCTTGTGACGGTGAGGTGCGAGTATGG GATTTAAATGTGCGCAAATGTGTGTGGCGTGCGTATGCACACGCAGGTTT CGTCAGAGGTCTTTCTGTAGCACCCGGTGGGGGAACTTTTTTCTCTTGCG GAGACAAGACAGTCAAGCAATGGACATTATGCGTCGCAGACGACTCCAGA CAGATGAAGATCAAGACACTCAGTCGATGTGAAGAGACTTTCACAAGGGA GTGCAAAGGAGATGTCGTCAAGGTTTTTCGAAATCTGGATCCCGCCCTAC ATCCTTTTGACAAAGCCCGGGAATATACTCGCGCCCTTCAAGCGACTAAG CTGGATAAGCTGTTTGCCAAACCATTTATCGAGAGCCAACGACGCAAAGC TCAAAATCGCAGGAAGCATGCAAGAAAAGATAGCGAAGATAGTAAATTTG TGCCAGAGCGCAAACAGAAGGTTGTGGCGGAGATTTCATAGATGTCCACG CGCTGCAACGCATGTCGTGTACAGCTTGATTTTTGTAAAACATTACATTG AATTAGAACGAGGCATGTCACTTCATTATATCGCATTGGAACATATATTT TTTAAATTCGTGCCGATATGTTGAGAACCCGCGGCTCTCAATACGTGGCT CCACAGTGAGACACTGACATCCATTGATCATCACTGGCGCAACGCACATT TCGCCACGGCGGCTGACACCCGCGTTTTGGTGTGGGACCATGCACGTTCG AATCCCGTTCAATCATTTTCGTGGGGATGCGATGCCATCTCCTGCGTGCG ATACAATCCCGCTGAGCGCTCGCTTCTGGCCAGCACGGGATCGGACCGGG CGGTCACGCTCTTCGACACGCGCGAGGGTGCGGCTATGCGGAAGGCCGTG CTTGTCATGCGCTCGAACGCACTGGCCTGGAATCCGCAAGAACCCTTGAA TTTCACAGTTGCCAGCGAGGACCACAATCTCTATACTTTCGATCTCCGAA AGCTTGACCAAGCCAAGCTCATCCACAAGGATCACGTGGGCGCCGTCATG GACCTCGCCTTCTCACCTACAGGTCAAGAATTCGTCACCGGCTCATACGA TCGCACCGTGCGTATTTTTGGTCACAGAGAAGGCCGGAGCCGTGAGGTTT ATCACACCAAACGTATGCAGCGCGTCTTCTGCGTCAATTTTTCGGGGGAC GGCCGCTTCGTGCTCACGGGCTCTGACGACACCAACCTCCGAATATGGAA GGCAGAAGCCTCACAGCAACTTGGAGTGAAAGTTCCTCGGGCAGAGAAGA AGTTGGAGTACGAGGAAGCGTTGAAAAAGCGCTATCAACACATGCCTGAG GTGCGGCGCATCGCTAAACACCGGCACGTGCATTGGATGGCCACGCAGAT GGTGTATTTTGCTCTGCTCTTAGCAAACGAAATTTGGTTCAGTTCTTAAC AGGAGCTTGTGACGGTGAGGTGCGAGTATGGGATTTAAATGTGCGCAAAT GTGTGTGGCGTGCGTATGCACACGCAGGTTTCGTCAGAGGTCTTTCTGTA GCACCCGGTGGGGGAACTTTTTTCTCTTGCGGAGACAAGACAGTCAAGCA ATGGACATTATGCGTCGCAGACGACTCCAGACAGATGAAGATCAAGACAC TCAGTCGATGTGAAGAGACTTTCACAAGGGAGTGCAAAGGAGATGTCGTC AAGGTTTTTCGAAATCTGGATCCCGCCCTACATCCTTTTGACAAAGCCCG GGAATATACTCGCGCCCTTCAAGCGACTAAGCTGGATAAGCTGTTTGCCA AACCATTTATCGAGAGCCAACGACGCAAAGCTCAAAATCGCAGGAAGCAT GCAAGAAAAGATAGCGAAGATAGTAAATTTGTGCCAGAGCGCAAACAGAA GGTTGTGGCGGAGATTTCATAGATGTCCACGCGCTGCAACGCATGTCGTG TACAGCTTGATTTTTGTAAAACATTACATTGAATTAGAACGAGGCATGTC ACTTCATTATATCGCATTGGAACATATATTTTTTAAATTCGTGCCGATAT GTTGAGAACCCGCGGCTCTCAATACGTGGCTCCACAGTGAGACACTGACA TCCATTGATCATCACTGGCGCAACGCACATTTCGCCACGGCGGCTGACAC CCGCGTTTTGGTGTGGGACCATGCACGTTCGAATCCCGTTCAATCATTTT CGTGGGGATGCGATGCCATCTCCTGCGTGCGATACAATCCCGCTGAGCGC TCGCTTCTGGCCAGCACGGGATCGGACCGGGCGGTCACGCTCTTCGACAC GCGCGAGGGTGCGGCTATGCGGAAGGCCGTGCTTGTCATGCGCTCGAACG CACTGGCCTGGAATCCGCAAGAACCCTTGAATTTCACAGTTGCCAGCGAG GACCACAATCTCTATACTTTCGATCTCCGAAAGCTTGACCAAGCCAAGCT CATCCACAAGGATCACGTGGGCGCCGTCATGGACCTCGCCTTCTCACCTA CAGGTCAAGAATTCGTCACCGGCTCATACGATCGCACCGTGCGTATTTTT GGTCACAGAGAAGGCCGGAGCCGTGAGGTTTATCACACCAAACGTATGCA GCGCGTCTTCTGCGTCAATTTTTCGGGGGACGGCCGCTTCGTGCTCACGG GCTCTGACGACACCAACCTCCGAATATGGAAGGCAGAAGCCTCACAGCAA CTTGGAGTGAAAGTTCCTCGGGCAGAGAAGAAGTTGGAGTACGAGGAAGC GTTGAAAAAGCGCTATCAACACATGCCTGAGGTGCGGCGCATCGCTAAAC ACCGGCACGTGCATTGGATGGCCACGCAGATGGTGTATTTTGCTCTGCTC TTAGCAAACGAAATTTGGTTCAGTTCTTAACAGGAGCTTGTGACGGTGAG GTGCGAGTATGGGATTTAAATGTGCGCAAATGTGTGTGGCGTGCGTATGC ACACGCAGGTTTCGTCAGAGGTCTTTCTGTAGCACCCGGTGGGGGAACTT TTTTCTCTTGCGGAGACAAGACAGTCAAGCAATGGACATTATGCGTCGCA GACGACTCCAGACAGATGAAGATCAAGACACTCAGTCGATGTGAAGAGAC TTTCACAAGGGAGTGCAAAGGAGATGTCGTCAAGGTTTTTCGAAATCTGG ATCCCGCCCTACATCCTTTTGACAAAGCCCGGGAATATACTCGCGCCCTT CAAGCGACTAAGCTGGATAAGCTGTTTGCCAAACCATTTATCGAGAGCCA ACGACGCAAAGCTCAAAATCGCAGGAAGCATGCAAGAAAAGATAGCGAAG ATAGTAAATTTGTGCCAGAGCGCAAACAGAAGGTTGTGGCGGAGATTTCA TAGATGTCCACGCGCTGCAACGCATGTCGTGTACAGCTTGATTTTTGTAA AACATTACATTGAATTAGAACGAGGCATGTCACTTCATTATATCGCATTG GAACATATATTTTTTAAATTCGTGCCGATATGTTGAGAACCCGCGGCTCT CAATACGTGGCTCCACAGTGAGACACTGACATCCATTGATCATCACTGGC GCAACGCACATTTCGCCACGGCGGCTGACACCCGCGTTTTGGTGTGGGAC CATGCACGTTCGAATCCCGTTCAATCATTTTCGTGGGGATGCGATGCCAT CTCCTGCGTGCGATACAATCCCGCTGAGCGCTCGCTTCTGGCCAGCACGG GATCGGACCGGGCGGTCACGCTCTTCGACACGCGCGAGGGTGCGGCTATG CGGAAGGCCGTGCTTGTCATGCGCTCGAACGCACTGGCCTGGAATCCGCA AGAACCCTTGAATTTCACAGTTGCCAGCGAGGACCACAATCTCTATACTT TCGATCTCCGAAAGCTTGACCAAGCCAAGCTCATCCACAAGGATCACGTG GGCGCCGTCATGGACCTCGCCTTCTCACCTACAGGTCAAGAATTCGTCAC CGGCTCATACGATCGCACCGTGCGTATTTTTGGTCACAGAGAAGGCCGGA GCCGTGAGGTTTATCACACCAAACGTATGCAGCGCGTCTTCTGCGTCAAT TTTTCGGGGGACGGCCGCTTCGTGCTCACGGGCTCTGACGACACCAACCT CCGAATATGGAAGGCAGAAGCCTCACAGCAACTTGGAGTGAAAGTTCCTC GGGCAGAGAAGAAGTTGGAGTACGAGGAAGCGTTGAAAAAGCGCTATCAA CACATGCCTGAGGTGCGGCGCATCGCTAAACACCGGCACGTGCATTGGAT GGCCACGCAGATGGTGTATTTTGCTCTGCTCTTAGCAAACGAAATTTGGT TCAGTTCTTAACAGGAGCTTGTGACGGTGAGGTGCGAGTATGGGATTTAA ATGTGCGCAAATGTGTGTGGCGTGCGTATGCACACGCAGGTTTCGTCAGA GGTCTTTCTGTAGCACCCGGTGGGGGAACTTTTTTCTCTTGCGGAGACAA GACAGTCAAGCAATGGACATTATGCGTCGCAGACGACTCCAGACAGATGA AGATCAAGACACTCAGTCGATGTGAAGAGACTTTCACAAGGGAGTGCAAA GGAGATGTCGTCAAGGTTTTTCGAAATCTGGATCCCGCCCTACATCCTTT TGACAAAGCCCGGGAATATACTCGCGCCCTTCAAGCGACTAAGCTGGATA AGCTGTTTGCCAAACCATTTATCG back to top
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