EWM25440.1, cds5236 (CDS) Nannochloropsis gaditana

Overview
NameEWM25440.1
Unique Namecds5236
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002465.1:531022..531199 -
Alignment locationCM002465.1:530549..530805 -
Alignment locationCM002465.1:529699..530451 -
Alignment locationCM002465.1:529407..529649 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM25440.1
Productddb1- and cul4-associated factor
Orig transcript idgnl|cribi|Naga_100005g36.6734.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002465.1supercontigCM002465.1:531022..531199 -
CM002465.1supercontigCM002465.1:530549..530805 -
CM002465.1supercontigCM002465.1:529699..530451 -
CM002465.1supercontigCM002465.1:529407..529649 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR017986WD40_repeat_dom
IPR015943WD40/YVTN_repeat-like_dom
IPR007287Sof1
IPR001680WD40_repeat
Homology
BLAST of EWM25440.1 vs. NCBI_GenBank
Match: gi|585107201|gb|EWM25440.1| (ddb1- and cul4-associated factor [Nannochloropsis gaditana])

HSP 1 Score: 993.801 bits (2568), Expect = 0.000e+0
Identity = 476/476 (100.00%), Postives = 476/476 (100.00%), Query Frame = 0
Query:    1 MKIKTLSRCEETFTRECKGDVVKVFRNLDPALHPFDKAREYTRALQATKLDKLFAKPFIGALDGHADGVFCSALSKRNLVQFLTGACDGEVRVWDLNVRKCVWRAYAHAGFVRGLSVAPGGGTFFSCGDKTVKQWTLCVADDSRQEPAALNTWLHSETLTSIDHHWRNAHFATAADTRVLVWDHARSNPVQSFSWGCDAISCVRYNPAERSLLASTGSDRAVTLFDTREGAAMRKAVLVMRSNALAWNPQEPLNFTVASEDHNLYTFDLRKLDQAKLIHKDHVGAVMDLAFSPTGQEFVTGSYDRTVRIFGHREGRSREVYHTKRMQRVFCVNFSGDGRFVLTGSDDTNLRIWKAEASQQLGVKVPRAEKKLEYEEALKKRYQHMPEVRRIAKHRHRANDAKLKIAGSMQEKIAKIVNLCQSANRRLWRRFHRCPRAATHVVYSLIFVKHYIELERGMSLHYIALEHIFFKFVPIC 476
            MKIKTLSRCEETFTRECKGDVVKVFRNLDPALHPFDKAREYTRALQATKLDKLFAKPFIGALDGHADGVFCSALSKRNLVQFLTGACDGEVRVWDLNVRKCVWRAYAHAGFVRGLSVAPGGGTFFSCGDKTVKQWTLCVADDSRQEPAALNTWLHSETLTSIDHHWRNAHFATAADTRVLVWDHARSNPVQSFSWGCDAISCVRYNPAERSLLASTGSDRAVTLFDTREGAAMRKAVLVMRSNALAWNPQEPLNFTVASEDHNLYTFDLRKLDQAKLIHKDHVGAVMDLAFSPTGQEFVTGSYDRTVRIFGHREGRSREVYHTKRMQRVFCVNFSGDGRFVLTGSDDTNLRIWKAEASQQLGVKVPRAEKKLEYEEALKKRYQHMPEVRRIAKHRHRANDAKLKIAGSMQEKIAKIVNLCQSANRRLWRRFHRCPRAATHVVYSLIFVKHYIELERGMSLHYIALEHIFFKFVPIC
Sbjct:    1 MKIKTLSRCEETFTRECKGDVVKVFRNLDPALHPFDKAREYTRALQATKLDKLFAKPFIGALDGHADGVFCSALSKRNLVQFLTGACDGEVRVWDLNVRKCVWRAYAHAGFVRGLSVAPGGGTFFSCGDKTVKQWTLCVADDSRQEPAALNTWLHSETLTSIDHHWRNAHFATAADTRVLVWDHARSNPVQSFSWGCDAISCVRYNPAERSLLASTGSDRAVTLFDTREGAAMRKAVLVMRSNALAWNPQEPLNFTVASEDHNLYTFDLRKLDQAKLIHKDHVGAVMDLAFSPTGQEFVTGSYDRTVRIFGHREGRSREVYHTKRMQRVFCVNFSGDGRFVLTGSDDTNLRIWKAEASQQLGVKVPRAEKKLEYEEALKKRYQHMPEVRRIAKHRHRANDAKLKIAGSMQEKIAKIVNLCQSANRRLWRRFHRCPRAATHVVYSLIFVKHYIELERGMSLHYIALEHIFFKFVPIC 476          
BLAST of EWM25440.1 vs. NCBI_GenBank
Match: gi|298705535|emb|CBJ28802.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 590.112 bits (1520), Expect = 0.000e+0
Identity = 275/398 (69.10%), Postives = 322/398 (80.90%), Query Frame = 0
Query:    1 MKIKTLSRCEETFTRECKGDVVKVFRNLDPALHPFDKAREYTRALQATKLDKLFAKPFIGALDGHADGVFCSALSKRNLVQFLTGACDGEVRVWDLNVRKCVWRAYAHAGFVRGLSVAPGGGTFFSCGDK-TVKQWTLCVADDSRQEPAALNTWL-HSETLTSIDHHWRNAHFATAADTRVLVWDHARSNPVQSFSWGCDAISCVRYNPAERSLLASTGSDRAVTLFDTREGAAMRKAVLVMRSNALAWNPQEPLNFTVASEDHNLYTFDLRKLDQAKLIHKDHVGAVMDLAFSPTGQEFVTGSYDRTVRIFGHREGRSREVYHTKRMQRVFCVNFSGDGRFVLTGSDDTNLRIWKAEASQQLGVKVPRAEKKLEYEEALKKRYQHMPEVRRIAKHRH 396
            MK+KT+SR EE++TR+CKGD ++V RN DP+LHPF+KAREYTRALQ+ KLDK+FAKP +GALDGH DGVFCSA S+RNLVQFL+GACDGE+R+WDL+ R CVWRA  H GFVRGLSV P G +F S GD   VKQW L VA D  + P    TW+  S    S+DHHW +A FATA D+ V +WDH+R+ P  S+ WG D+ +CVR+NPAER LLASTGS R V L+DTR    MRK VL MRSNA+AWNPQEP+NF  A+ED NLYTFDLR L+QA +IHKDHV AVMD++FSPTGQEF +GSYDRTVR+F HR GRSREVYHTKRMQRVFCVNFS D RFV+TGSDDTNLRIWKA AS++LG  VPR  +K EY ++LKKRY+HMPEVRRIAKHRH
Sbjct:    1 MKVKTISRVEESYTRDCKGDRLQVHRNRDPSLHPFEKAREYTRALQSVKLDKMFAKPLVGALDGHGDGVFCSASSRRNLVQFLSGACDGEIRLWDLSRRSCVWRAVGHQGFVRGLSVTPDGASFLSAGDDGMVKQWELGVASDLSETPEPTATWMGKSGGFKSLDHHWTDAKFATAGDS-VDLWDHSRAEPTLSYQWGADSNNCVRFNPAERCLLASTGSSREVCLYDTRATVPMRKVVLQMRSNAVAWNPQEPMNFVCANEDTNLYTFDLRNLNQALMIHKDHVSAVMDVSFSPTGQEFASGSYDRTVRVFPHRAGRSREVYHTKRMQRVFCVNFSADARFVMTGSDDTNLRIWKANASEKLGKVVPREARKQEYRDSLKKRYEHMPEVRRIAKHRH 397          
BLAST of EWM25440.1 vs. NCBI_GenBank
Match: gi|1173940682|gb|OQR90030.1| (glycoside hydrolase, partial [Thraustotheca clavata])

HSP 1 Score: 564.688 bits (1454), Expect = 0.000e+0
Identity = 259/397 (65.24%), Postives = 314/397 (79.09%), Query Frame = 0
Query:    1 MKIKTLSRCEETFTRECKGDVVKVFRNLDPALHPFDKAREYTRALQATKLDKLFAKPFIGALDGHADGVFCSALSKRNLVQFLTGACDGEVRVWDLNVRKCVWRAYAHAGFVRGLSVAPGGGTFFSCG-DKTVKQWTLCVADDSRQEPAALNTWLHSETLTSIDHHWRNAHFATAADTRVLVWDHARSNPVQSFSWGCDAISCVRYNPAERSLLASTGSDRAVTLFDTREGAAMRKAVLVMRSNALAWNPQEPLNFTVASEDHNLYTFDLRKLDQAKLIHKDHVGAVMDLAFSPTGQEFVTGSYDRTVRIFGHREGRSREVYHTKRMQRVFCVNFSGDGRFVLTGSDDTNLRIWKAEASQQLGVKVPRAEKKLEYEEALKKRYQHMPEVRRIAKHRH 396
            MK+KT+SR E  FT+E   D  K+ RN DPALHPF++ REYTRAL A KLDK+FAKPFIGALDGH D V C A S ++LV F++GACDGE+R+WDL  RKCVW  Y HAGFVRGL++AP G TFFSC  DKT+KQW + +A D   +  AL T+   E    IDHHW N+ FAT +   V VWDH R++P+  FSWG D+I+ V++NPAE SLLASTGSDRA+TL+DTR   +MRK +L MRSNALAWNP EP +FTVA+EDHNLYTFD+R LD+A +IHKDHV AVMD+A+SPTG+EFV+GSYDRT+RIF  R  +SREVYHTKRMQR+F V FS D +FVL+GSDDTN+RIWKAEAS+ +G   PR  KKLEY+E+LKKRYQH+ E+RRI+KHRH
Sbjct:   17 MKVKTISRVESQFTQELSTDKTKIHRNYDPALHPFERPREYTRALNAVKLDKVFAKPFIGALDGHCDSVSCFANSPKSLVAFVSGACDGEIRLWDLPRRKCVWSVYGHAGFVRGLTMAPDGNTFFSCSEDKTIKQWKMQIAIDDDDQHEALQTFHGKEPFMGIDHHWSNSTFATCSSV-VQVWDHDRTDPIHQFSWGADSITSVKFNPAEPSLLASTGSDRAITLYDTRVATSMRKVILEMRSNALAWNPMEPFHFTVANEDHNLYTFDMRNLDRALMIHKDHVSAVMDVAYSPTGREFVSGSYDRTIRIFNVRSAKSREVYHTKRMQRIFAVKFSADAKFVLSGSDDTNIRIWKAEASKSVGKLNPRERKKLEYQESLKKRYQHLTEIRRISKHRH 412          
BLAST of EWM25440.1 vs. NCBI_GenBank
Match: gi|1173931906|gb|OQR84073.1| (glycoside hydrolase [Achlya hypogyna])

HSP 1 Score: 562.762 bits (1449), Expect = 0.000e+0
Identity = 262/420 (62.38%), Postives = 325/420 (77.38%), Query Frame = 0
Query:    1 MKIKTLSRCEETFTRECKGDVVKVFRNLDPALHPFDKAREYTRALQATKLDKLFAKPFIGALDGHADGVFCSALSKRNLVQFLTGACDGEVRVWDLNVRKCVWRAYAHAGFVRGLSVAPGGGTFFSCG-DKTVKQWTLCVADDSRQEPAALNTWLHSETLTSIDHHWRNAHFATAADTRVLVWDHARSNPVQSFSWGCDAISCVRYNPAERSLLASTGSDRAVTLFDTREGAAMRKAVLVMRSNALAWNPQEPLNFTVASEDHNLYTFDLRKLDQAKLIHKDHVGAVMDLAFSPTGQEFVTGSYDRTVRIFGHREGRSREVYHTKRMQRVFCVNFSGDGRFVLTGSDDTNLRIWKAEASQQLGVKVPRAEKKLEYEEALKKRYQHMPEVRRIAKHRH------RANDAKLKIAGSMQEKI 413
            MK+KT+SR E  FT+E   D  K+ RN DP+LHPF++ REYTRAL A KLDK+FAKPFI +LDGH D V C A S ++LV F++GACDGE+R+WDL  RKCVW  Y HAGFVRGL+VAP G TFFSC  DKT+KQW L +A  + ++P AL T+   E    IDHHW N+ FAT +   V VWDH RS+P+Q FSWG D+I+ V++NPAE SLLASTGSDRA+ L+DTR   +MRK +L MRSNALAWNP EP +FTVA+EDHNLYTFD+R LD+A ++HKDHV AVMD+++SPTG+EFV+GSYDRT+RIF  R  +SREVYHTKRMQR+F V FS D +FVL+GSDDTN+R+WK+EAS++LG   PRA K LEY++ALKKR+QH+ EVRRIAKHRH      +A  AK + A    +K+
Sbjct:    1 MKVKTISRIESQFTQELSSDKTKIHRNYDPSLHPFERPREYTRALNAVKLDKIFAKPFIASLDGHCDSVSCFANSNKSLVAFVSGACDGEIRLWDLPRRKCVWSVYGHAGFVRGLTVAPDGNTFFSCSEDKTIKQWKLQIAIGADEQPEALQTFHGKEAFMGIDHHWSNSTFATCSSV-VQVWDHNRSDPLQQFSWGADSITSVKFNPAEPSLLASTGSDRAINLYDTRVATSMRKVILEMRSNALAWNPMEPYHFTVANEDHNLYTFDMRNLDRALMVHKDHVSAVMDVSYSPTGREFVSGSYDRTIRIFNVRSAKSREVYHTKRMQRIFAVKFSADAKFVLSGSDDTNIRVWKSEASKELGKLNPRARKTLEYKDALKKRFQHLTEVRRIAKHRHVPKAIMKATTAKRESAARENKKL 419          
BLAST of EWM25440.1 vs. NCBI_GenBank
Match: gi|813103202|ref|XP_012194058.1| (hypothetical protein SPRG_18842 [Saprolegnia parasitica CBS 223.65] >gi|641541938|gb|KDO35683.1| hypothetical protein SPRG_18842 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 562.762 bits (1449), Expect = 0.000e+0
Identity = 268/440 (60.91%), Postives = 329/440 (74.77%), Query Frame = 0
Query:    1 MKIKTLSRCEETFTRECKGDVVKVFRNLDPALHPFDKAREYTRALQATKLDKLFAKPFIGALDGHADGVFCSALSKRNLVQFLTGACDGEVRVWDLNVRKCVWRAYAHAGFVRGLSVAPGGGTFFSCG-DKTVKQWTLCVADDSRQEPAALNTWLHSETLTSIDHHWRNAHFATAADTRVLVWDHARSNPVQSFSWGCDAISCVRYNPAERSLLASTGSDRAVTLFDTREGAAMRKAVLVMRSNALAWNPQEPLNFTVASEDHNLYTFDLRKLDQAKLIHKDHVGAVMDLAFSPTGQEFVTGSYDRTVRIFGHREGRSREVYHTKRMQRVFCVNFSGDGRFVLTGSDDTNLRIWKAEASQQLGVKVPRAEKKLEYEEALKKRYQHMPEVRRIAKHRHRANDAKLKIAGSMQEKIAKIVNLCQSANRRLWRRFHRCPRAAT 439
            MK+KT+SR E  FT+E   D  K+ RN DP+LHPF++ REYTRAL ATKLDK+FAKPFI ALDGH D V C A S ++LV F++GACDGE+R+WDL  RKCVW  Y HAGFVRGL+ AP G TFFSC  DKT+KQW L +A    ++P AL T+   E    IDHHW N+ FAT +   V VWDH RS+P+  FSWG D+I+ V++NPAE SLLASTGSDRA+ L+DTR   +MRK VL MRSNALAWNP+EP +FTVA+EDHNLYTFD+R LD+A ++HKDHV AVMD+++SPTG+EFV+GSYDRT+RIF  R  +SREVYHTKRMQR+F V FS D +FVL+GSDDTN+RIWKAEAS+ LG   PR  K++EY++ALKKR+QH+ EVRRIAKHRH     K     SM ++ A   +  +  NRR   R  + P   T
Sbjct:    1 MKVKTISRVESQFTQELATDKTKIHRNYDPSLHPFERPREYTRALNATKLDKIFAKPFIAALDGHCDSVSCFASSPKSLVAFVSGACDGEIRLWDLPRRKCVWSVYGHAGFVRGLTTAPDGNTFFSCSEDKTIKQWKLAIAIGDDEQPEALQTFHGKEPFMGIDHHWSNSTFATCSSV-VQVWDHQRSDPLHEFSWGADSITSVKFNPAEPSLLASTGSDRAINLYDTRVATSMRKVVLEMRSNALAWNPREPYHFTVANEDHNLYTFDMRNLDRALMVHKDHVSAVMDVSYSPTGREFVSGSYDRTIRIFNVRSAKSREVYHTKRMQRIFAVKFSADSKFVLSGSDDTNIRIWKAEASKHLGKLAPRERKQVEYKDALKKRFQHLTEVRRIAKHRHVPKAIK---KASMAKQEANERDNKKLENRRKHSRPGKVPYVDT 436          
BLAST of EWM25440.1 vs. NCBI_GenBank
Match: gi|669143348|ref|XP_008607236.1| (hypothetical protein SDRG_03381 [Saprolegnia diclina VS20] >gi|530740933|gb|EQC39175.1| hypothetical protein SDRG_03381 [Saprolegnia diclina VS20])

HSP 1 Score: 560.836 bits (1444), Expect = 0.000e+0
Identity = 268/440 (60.91%), Postives = 328/440 (74.55%), Query Frame = 0
Query:    1 MKIKTLSRCEETFTRECKGDVVKVFRNLDPALHPFDKAREYTRALQATKLDKLFAKPFIGALDGHADGVFCSALSKRNLVQFLTGACDGEVRVWDLNVRKCVWRAYAHAGFVRGLSVAPGGGTFFSCG-DKTVKQWTLCVADDSRQEPAALNTWLHSETLTSIDHHWRNAHFATAADTRVLVWDHARSNPVQSFSWGCDAISCVRYNPAERSLLASTGSDRAVTLFDTREGAAMRKAVLVMRSNALAWNPQEPLNFTVASEDHNLYTFDLRKLDQAKLIHKDHVGAVMDLAFSPTGQEFVTGSYDRTVRIFGHREGRSREVYHTKRMQRVFCVNFSGDGRFVLTGSDDTNLRIWKAEASQQLGVKVPRAEKKLEYEEALKKRYQHMPEVRRIAKHRHRANDAKLKIAGSMQEKIAKIVNLCQSANRRLWRRFHRCPRAAT 439
            MK+KT+SR E  FT+E   D  K+ RN DP+LHPF++ REYTRAL ATKLDK+FAKPFI ALDGH D V C A S ++LV F++GACDGE+R+WDL  RKCVW  Y HAGFVRGL+ AP G TFFSC  DKT+KQW L +A    ++P AL T+   E    IDHHW N  FAT +   V VWDH RS+P+  FSWG D+I+ V++NPAE SLLASTGSDRA+ L+DTR   +MRK VL MRSNALAWNP+EP +FTVA+EDHNLYTFD+R LD+A ++HKDHV AVMD+++SPTG+EFV+GSYDRT+RIF  R  +SREVYHTKRMQR+F V FS D +FVL+GSDDTN+RIWKAEAS+ LG   PR  K++EY++ALKKR+QH+ EVRRIAKHRH     K     SM ++ A   +  +  NRR   R  + P   T
Sbjct:    1 MKVKTISRVESQFTQELATDKTKIHRNYDPSLHPFERPREYTRALNATKLDKIFAKPFIAALDGHCDSVSCFASSPKSLVAFVSGACDGEIRLWDLPRRKCVWSVYGHAGFVRGLTTAPDGNTFFSCSEDKTIKQWKLAIAIGDDEQPEALQTFHGKEPFMGIDHHWTNNTFATCSSV-VQVWDHHRSDPLHEFSWGADSITSVKFNPAEPSLLASTGSDRAINLYDTRVATSMRKVVLEMRSNALAWNPREPYHFTVANEDHNLYTFDMRNLDRALMVHKDHVSAVMDVSYSPTGREFVSGSYDRTIRIFNVRSAKSREVYHTKRMQRIFAVKFSADSKFVLSGSDDTNIRIWKAEASKHLGKLAPRERKQVEYKDALKKRFQHLTEVRRIAKHRHVPKAIK---KASMAKQEANERDNKKLENRRKHSRPGKVPYVDT 436          
BLAST of EWM25440.1 vs. NCBI_GenBank
Match: gi|698805738|ref|XP_009835898.1| (hypothetical protein H257_10875 [Aphanomyces astaci] >gi|574109307|gb|ETV74811.1| hypothetical protein H257_10875 [Aphanomyces astaci])

HSP 1 Score: 559.681 bits (1441), Expect = 0.000e+0
Identity = 257/397 (64.74%), Postives = 316/397 (79.60%), Query Frame = 0
Query:    1 MKIKTLSRCEETFTRECKGDVVKVFRNLDPALHPFDKAREYTRALQATKLDKLFAKPFIGALDGHADGVFCSALSKRNLVQFLTGACDGEVRVWDLNVRKCVWRAYAHAGFVRGLSVAPGGGTFFSCG-DKTVKQWTLCVADDSRQEPAALNTWLHSETLTSIDHHWRNAHFATAADTRVLVWDHARSNPVQSFSWGCDAISCVRYNPAERSLLASTGSDRAVTLFDTREGAAMRKAVLVMRSNALAWNPQEPLNFTVASEDHNLYTFDLRKLDQAKLIHKDHVGAVMDLAFSPTGQEFVTGSYDRTVRIFGHREGRSREVYHTKRMQRVFCVNFSGDGRFVLTGSDDTNLRIWKAEASQQLGVKVPRAEKKLEYEEALKKRYQHMPEVRRIAKHRH 396
            MK+KT+SR E+TFT+E   D  K+ RN DP LHPF++ REYTRAL A KLDKLFAKPF+GALDGH D V C   S ++LVQF++GACDGE+R+WDL  RKCVW  Y HAGFVRGL+VAP G +FFSC  DKT+KQW + +A++    P A+ T+   E+   IDHHW N+ FAT +   V VWDH RS+P+ ++SWG D+I+ V++NPAE SLLASTGSDRAV L+DTR   +MRK V+ MR+NALAWNP EP +FTVA+EDHNLYTFD+R LD+A +IHKDHV AVMD+A+SPTG+EFV+GSYDR++RIF  R  +SREVYHTKRMQR+F V FS D +FVL+GSDDTN+RIWKA+AS+ LG   PR  KKLEY +ALKKRYQH+ EV+RIAKHRH
Sbjct:    1 MKVKTISRVEQTFTQELATDRTKIHRNFDPKLHPFERPREYTRALNAVKLDKLFAKPFVGALDGHCDSVSCFGTSNKSLVQFVSGACDGEIRLWDLPRRKCVWSVYGHAGFVRGLTVAPDGNSFFSCSEDKTIKQWRMAIANED-DAPEAIQTFHGKESFMGIDHHWTNSTFATCSSV-VQVWDHNRSDPIHNYSWGADSITSVKFNPAEPSLLASTGSDRAVALYDTRLAQSMRKIVMDMRNNALAWNPMEPYHFTVANEDHNLYTFDMRNLDRALMIHKDHVSAVMDIAYSPTGKEFVSGSYDRSIRIFNVRSSKSREVYHTKRMQRIFAVKFSADAKFVLSGSDDTNIRIWKAQASRSLGKLNPRERKKLEYNDALKKRYQHLTEVKRIAKHRH 395          
BLAST of EWM25440.1 vs. NCBI_GenBank
Match: gi|673029286|ref|XP_008868604.1| (hypothetical protein, variant [Aphanomyces invadans] >gi|574476221|gb|ETW03220.1| hypothetical protein, variant [Aphanomyces invadans])

HSP 1 Score: 556.984 bits (1434), Expect = 0.000e+0
Identity = 256/397 (64.48%), Postives = 314/397 (79.09%), Query Frame = 0
Query:    1 MKIKTLSRCEETFTRECKGDVVKVFRNLDPALHPFDKAREYTRALQATKLDKLFAKPFIGALDGHADGVFCSALSKRNLVQFLTGACDGEVRVWDLNVRKCVWRAYAHAGFVRGLSVAPGGGTFFSCG-DKTVKQWTLCVADDSRQEPAALNTWLHSETLTSIDHHWRNAHFATAADTRVLVWDHARSNPVQSFSWGCDAISCVRYNPAERSLLASTGSDRAVTLFDTREGAAMRKAVLVMRSNALAWNPQEPLNFTVASEDHNLYTFDLRKLDQAKLIHKDHVGAVMDLAFSPTGQEFVTGSYDRTVRIFGHREGRSREVYHTKRMQRVFCVNFSGDGRFVLTGSDDTNLRIWKAEASQQLGVKVPRAEKKLEYEEALKKRYQHMPEVRRIAKHRH 396
            MK+KT+SR E+TFT+E   D  K+ RN DP LHPF++ REYTRAL A KLDKLFAKPF+GALDGH D V C A S ++LVQF++GACDGE+R+WDL  RKCVW  Y H GFVRGL+VAP G TFFSC  DK++KQW + +A++    P  + T+   E+   IDHHW N  FAT +   V VWDH RS+P+  +SWG D+I+ V++NPAE SLLASTGSDRAV+L+DTR   +MRK V+ MR+NALAWNP EP +FTVA+EDHNLYTFD+R LD+A +IHKDHV AVMD+A+SPTG+EFV+GSYDR++RIF  R  +SREVYHTKRMQR+F V FS D +FVL+GSDDTN+RIWKA+AS+ LG   PR  KKLEY +ALKKRYQH+ EV+RIAKHRH
Sbjct:    1 MKVKTISRVEQTFTQELATDRTKIHRNFDPKLHPFERPREYTRALNAVKLDKLFAKPFVGALDGHCDSVSCFATSNKSLVQFVSGACDGEIRLWDLPRRKCVWSVYGHGGFVRGLTVAPDGNTFFSCSEDKSIKQWRMAIANED-DSPEPVQTFHGKESFMGIDHHWSNTTFATCSSV-VQVWDHNRSDPIHHYSWGADSITSVKFNPAEASLLASTGSDRAVSLYDTRLAQSMRKIVMEMRNNALAWNPMEPYHFTVANEDHNLYTFDMRNLDRAVMIHKDHVSAVMDVAYSPTGKEFVSGSYDRSIRIFNVRSAKSREVYHTKRMQRIFAVKFSADAKFVLSGSDDTNIRIWKAQASRTLGKLNPRERKKLEYNDALKKRYQHLTEVKRIAKHRH 395          
BLAST of EWM25440.1 vs. NCBI_GenBank
Match: gi|570983267|gb|ETP43133.1| (hypothetical protein F442_10028 [Phytophthora parasitica P10297])

HSP 1 Score: 544.273 bits (1401), Expect = 0.000e+0
Identity = 250/397 (62.97%), Postives = 308/397 (77.58%), Query Frame = 0
Query:    1 MKIKTLSRCEETFTRECKGDVVKVFRNLDPALHPFDKAREYTRALQATKLDKLFAKPFIGALDGHADGVFCSALSKRNLVQFLTGACDGEVRVWDLNVRKCVWRAYAHAGFVRGLSVAPGGGTFFSCG-DKTVKQWTLCVADDSRQEPAALNTWLHSETLTSIDHHWRNAHFATAADTRVLVWDHARSNPVQSFSWGCDAISCVRYNPAERSLLASTGSDRAVTLFDTREGAAMRKAVLVMRSNALAWNPQEPLNFTVASEDHNLYTFDLRKLDQAKLIHKDHVGAVMDLAFSPTGQEFVTGSYDRTVRIFGHREGRSREVYHTKRMQRVFCVNFSGDGRFVLTGSDDTNLRIWKAEASQQLGVKVPRAEKKLEYEEALKKRYQHMPEVRRIAKHRH 396
            MK+KT+SR E+ FT+E + D +KVFRN DPALHPF++ REYTRAL A KL++LFAKPF+GALDGH DGV   A + ++LV F++GA DGEVRVWDL  RKCVW  Y H GFVRGL+V P G TF+SC  DKTVKQW L V D+    P AL T+   E    IDHHW    FAT   ++V VWD +RS P   F+WG D+I+ V +NPAE SLLASTGSDR +TL+D R  ++MRK V+ MRSNALAWNP EP+NFTVA+EDHNLYTFD+RK+++A  +HKDHV AVMD+A+SPTG+EFV+GSYDRT+RIF  R  +SREVYHT+RMQR+F V FS D  FVL+GSDDTN+RIWKAEAS++L    PR  +K+EY E+LK+RYQH+ E+ RI+KHRH
Sbjct:    1 MKVKTISRVEKDFTQEVQSDKLKVFRNYDPALHPFERPREYTRALNAAKLERLFAKPFVGALDGHCDGVTALATNPKSLVAFVSGAADGEVRVWDLPRRKCVWNVYGHRGFVRGLTVTPDGNTFYSCSEDKTVKQWALRVKDEDEDVPTALATFTSKEPFLGIDHHWSQNMFATCG-SKVQVWDPSRSTPTHEFAWGADSINSVHFNPAEASLLASTGSDRNITLYDIRVASSMRKIVMEMRSNALAWNPMEPMNFTVANEDHNLYTFDMRKMNRAMTVHKDHVSAVMDVAYSPTGREFVSGSYDRTIRIFKVRSAKSREVYHTQRMQRIFSVKFSADANFVLSGSDDTNIRIWKAEASKKLSKVNPRERRKMEYNESLKERYQHLREISRISKHRH 396          
BLAST of EWM25440.1 vs. NCBI_GenBank
Match: gi|675168655|ref|XP_008893212.1| (hypothetical protein PPTG_01596 [Phytophthora parasitica INRA-310] >gi|568106783|gb|ETN21413.1| hypothetical protein PPTG_01596 [Phytophthora parasitica INRA-310])

HSP 1 Score: 543.888 bits (1400), Expect = 0.000e+0
Identity = 250/397 (62.97%), Postives = 308/397 (77.58%), Query Frame = 0
Query:    1 MKIKTLSRCEETFTRECKGDVVKVFRNLDPALHPFDKAREYTRALQATKLDKLFAKPFIGALDGHADGVFCSALSKRNLVQFLTGACDGEVRVWDLNVRKCVWRAYAHAGFVRGLSVAPGGGTFFSCG-DKTVKQWTLCVADDSRQEPAALNTWLHSETLTSIDHHWRNAHFATAADTRVLVWDHARSNPVQSFSWGCDAISCVRYNPAERSLLASTGSDRAVTLFDTREGAAMRKAVLVMRSNALAWNPQEPLNFTVASEDHNLYTFDLRKLDQAKLIHKDHVGAVMDLAFSPTGQEFVTGSYDRTVRIFGHREGRSREVYHTKRMQRVFCVNFSGDGRFVLTGSDDTNLRIWKAEASQQLGVKVPRAEKKLEYEEALKKRYQHMPEVRRIAKHRH 396
            MK+KT+SR E+ FT+E + D +KVFRN DPALHPF++ REYTRAL A KL++LFAKPF+GALDGH DGV   A + ++LV F++GA DGEVRVWDL  RKCVW  Y H GFVRGL+V P G TF+SC  DKTVKQW L V D+    P AL T+   E    IDHHW    FAT   ++V VWD +RS P   F+WG D+I+ V +NPAE SLLASTGSDR +TL+D R  ++MRK V+ MRSNALAWNP EP+NFTVA+EDHNLYTFD+RK+++A  +HKDHV AVMD+A+SPTG+EFV+GSYDRT+RIF  R  +SREVYHT+RMQR+F V FS D  FVL+GSDDTN+RIWKAEAS++L    PR  +K+EY E+LK+RYQH+ E+ RI+KHRH
Sbjct:    1 MKVKTISRVEKDFTQEVQSDKLKVFRNYDPALHPFERPREYTRALNAAKLERLFAKPFVGALDGHCDGVTALATNPKSLVAFVSGAADGEVRVWDLPRRKCVWNVYGHRGFVRGLAVTPDGNTFYSCSEDKTVKQWALRVKDEDEDVPTALATFTSKEPFLGIDHHWSQNMFATCG-SKVQVWDPSRSTPTHEFAWGADSINSVHFNPAEASLLASTGSDRNITLYDIRVASSMRKIVMEMRSNALAWNPMEPMNFTVANEDHNLYTFDMRKMNRAMTVHKDHVSAVMDVAYSPTGREFVSGSYDRTIRIFKVRSAKSREVYHTQRMQRIFSVKFSADANFVLSGSDDTNIRIWKAEASKKLSKVNPRERRKMEYNESLKERYQHLREISRISKHRH 396          
The following BLAST results are available for this feature:
BLAST of EWM25440.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585107201|gb|EWM25440.1|0.000e+0100.00ddb1- and cul4-associated factor [Nannochloropsis ... [more]
gi|298705535|emb|CBJ28802.1|0.000e+069.10conserved unknown protein [Ectocarpus siliculosus][more]
gi|1173940682|gb|OQR90030.1|0.000e+065.24glycoside hydrolase, partial [Thraustotheca clavat... [more]
gi|1173931906|gb|OQR84073.1|0.000e+062.38glycoside hydrolase [Achlya hypogyna][more]
gi|813103202|ref|XP_012194058.1|0.000e+060.91hypothetical protein SPRG_18842 [Saprolegnia paras... [more]
gi|669143348|ref|XP_008607236.1|0.000e+060.91hypothetical protein SDRG_03381 [Saprolegnia dicli... [more]
gi|698805738|ref|XP_009835898.1|0.000e+064.74hypothetical protein H257_10875 [Aphanomyces astac... [more]
gi|673029286|ref|XP_008868604.1|0.000e+064.48hypothetical protein, variant [Aphanomyces invadan... [more]
gi|570983267|gb|ETP43133.1|0.000e+062.97hypothetical protein F442_10028 [Phytophthora para... [more]
gi|675168655|ref|XP_008893212.1|0.000e+062.97hypothetical protein PPTG_01596 [Phytophthora para... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna5249rna5249Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications