|
|
Properties
| Property Name | Value |
|---|
| Product | mitochondrial import inner membrane translocase subunit tim23 |
| Orig transcript id | gnl|cribi|Naga_100005g34.6650.mrna |
| Orig protein id | gnl|cribi|Naga_100005g34.6650 |
| Gene | TIM23 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002465.1 | supercontig | CM002465.1:525429..526391 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna5247 ID=rna5247|Name=rna5247|organism=Nannochloropsis gaditana|type=mRNA|length=2164bp
CTTAGTCTGCGTGCTGAATGGTGATCGCGTACTGTGAGCGGCGATGGCGC
CCGAGCGACTGCTGAGCCGTGCTGGATGTGGTTCCCGTGCTGGTCCTGGG
GCGAGACCCCTCTACCCGTAAGACCTGCTTGACGTTTTTTTTTAAACGGT
ATCTTATCAGCTCACGAAAAACATCTCACGTGCTTTGTCAGGCTGTGGCC
CCTTTTATTCTCGAAGCTGCGAAGCAACGTTGGGGGAGGGTTGCTACTCC
TCAGCTCTAAGACAAGCCGTCTCTCTGTGAAGGAAGTTATTTGGGCAGAA
ATATCTGCTCGCTGCGATCATCCTTTCAATAATCTCATGGCGGCAACCGC
TCGCACACGTTATTGCTCTACCCGGGGGTGTGTAAAAAATGCCACTTTCG
AAGACGTGGTTCTGGGTGGACTTGCCCCAGACCGTGGATTATATGTTCCA
GAGGTGCTTCCCACGCTCACCCCTGTCGAGCTGCAAGCTATGCGATGCCT
GACCTTTCCAAATCTGGCCTATGCTATAGTTTCTCGCTTCGTTGGAGAAG
AAGATATTCCAGCAAAGGACTTAAAGGATATAATAGATCGGAGCTACTCG
ACTTTCAGGTCTCCCGACGTCTCGCCAGTAAAGCAACTGGGCTCAGCCTG
GATCCTCGAGCTCTTCCACGGGCCCACTTTCGCTTTCAAAGACGTGGCTT
TGCAGTTGCTGGGCAATCTTTTCGAGTATTTTCTGTCCAAGAGGTCGGGA
GCCGAGGCTTTCTTGACCATTTTGGGAGCCACGTCCGGCGACACGGGGTC
AGCAGCCATCTACGGGCTGCGCGGAAAAGCGAATGTCCGTTGCTTTATCC
TTTACCCCAAGGGCCGAACGTCTGCCATTCAAGAGAGGCAAATGACAACT
GTACCAGATAAGAACGTCCAATGCATTGCCGTGGAGGGAACGTTCGATGA
TTGCCAAAATATAGTCAAGGCCGCGTTTCAAGATGCCAGCTTCCGCGAGG
AGGTCCGCCTGGGCGCTGTCAATTCTATCAATTGGGCGCGCGTCCTTGCA
CAGATAACCTACTACTTCTGGGCATATTTCCGTATCACAGATTTCGACCC
CTCCATAGAACAGTTGAGCTTCTCCGTTCCGACGGGTAACTTTGGTGACG
TGTTGGCTGGTTACTACGCCAAACGAATGGGGCTGCCGGTGGAGCAGTTG
CTCGTGGCCACGAACGTGAACGACATCCTGCACCGATTCTTCGTGACGGG
AGAGTATCACAAAGCCGAAGTGACGCAGACCCATTCACCATCCATGGATA
TATCAATTTCAAGCAACTTTGAGCGCTACTTATATGAGCTGGCAGATCGC
GATCACACCTTGCTCAAGAAATGGATGACCAACTTCGAAGCCACAGGCGA
GCTCACCCTTTCCGGACAGCTGCTCAAGAGGGCCCGGCAGGATTTTATTT
CGGGCCGAGGGGACGAGGAACAGACGCTCGCCACAATAAGGAAATGGCAC
GAAGACCACGGCTACCTCCTCTGCCCTCACTCTGCTGTGGGCGTGCATGC
GGCGGATTCGCTGGGTATGCTCAGGGATGGGCGGACAGTATGCCTTGCCA
CTGCTCATCCAGCCAAGTTTCCGGAGGCCACAGAGCGCCTGGGCATCGAA
AGCGATTTGCCCGCGGAGCTGGCGGCATTGGCGGACATGCCCATGCGCTC
TATCCTCTTGCACAACGATTTAGTTGAGGTACAGTCTTACGTGAAATCGC
GCATTCAATCGATGGACGAACAATGAGTCAAAAAAAATACAGGATCCGGA
AGGAGGCACGACTTTGAAATTCTGGGTAATTAGGTGTGTTCTTCTGGTAA
ATAACGACATGAACAGCGGAACGTAAAGACCGCGATCTTAAAAGAATGCT
AGGAAGCACAAGGATACCTTGAAGGGCTTCAAATTCTGAATGGATTTTGA
AGTGCATATGACTGCTTGGGATCCACAGTACCGAAGTTCAAAATGGAGTC
AATTTGAAGTTGACCTACGCAATACTCGTAGATATGAACGTTCCACATTT
TTTGCATGAGATGTTCCGCTTCATCGAAAATCGGTCCGCTGTGTACACGA
TTCATGGTTTACGTTCATTGAACTCTTCCACCCCATGCTCTGAAGTCGCA
TACCGAAATCACAG back to topprotein sequence of rna5247 >rna5247-protein ID=rna5247-protein|Name=rna5247|organism=Nannochloropsis gaditana|type=polypeptide|length=259bp
MWGSLPLRRVFFASGFTCTLKHDKTTYNKWTLKNCQDQAVALAIQLCPSL
SRKISHLFLLSQSSPGMVDNNTSSSYSASDDNLPKIDLFGGGNVDLRTVA
PLYGVASEEEPDYLDYDIKGRGTVERMFLYSGSSYLTGILTGGILGGRRG
WKTAPSPRFWLRLNSVMNGAGKLGSKWGNNAGVFALMYSLSESLLDHFET
DKVLGGHQAVNPVLSGAISGLLYKSTAAPRTAALASVLGGFGAGMFYVIR
GQLDRFFYR back to topmRNA from alignment at CM002465.1:525429..526391+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna5247 ID=rna5247|Name=rna5247|organism=Nannochloropsis gaditana|type=mRNA|length=963bp|location=Sequence derived from alignment at CM002465.1:525429..526391+ (Nannochloropsis gaditana)
GCTTGGCGCTTTGCCGGCACATATTGCTTCCTACTGGCCACCTATCATGG
TTTCGCTTGTCAAACCTCCCGTcgacgcctcctccgagtcgGAGGAGCGA
AAGGCGACTGAAACAGAAAATGTGGGGCTCTCTGCCTTTACGGAGAGTTT
TTTTTGCGAGTGGATTTACTTGTACATTGAAGCACGACAAGACTACTTAC
AACAAATGGACCTTGAAAAATTGTCAGGATCAAGCCGTTGCTCTGGCTAT
TCAATTATGCCCCTCTTTGTCGAGAAAGATATCTCACCTTTTCTTACTCT
CGCAATCCTCTCCAGGAATGGTCGACAACAACACATCTTCCTCGTACAGC
GCATCAGATGACAACCTGCCCAAAATTGATCTTTTTGGAGGTGGAAACGT
GGATCTGCGAACAGTTGCCCCTCTGTACGGCGTggcaagcgaggaggaac
CTGACTACCTGGACTACGATATTAAAGGCAGGGGCACGGTGGAACGCATG
TTTTTGTATTCGGGTTCTTCTTATCTGACAGGAATCTTAACCGGTGGTAT
TCTGGGTGGGCGTAGGGGGTGGAAGACAGCGCCCAGTCCACGATTCTGGC
TTCGACTGAACAGCGTCATGAACGGGGCAGGAAAGTTAGGCTCGAAGTGG
GGCAACAACGCCGGCGTTTTCGCTCTTATGTACTCGCTAAGTGAATCGTT
GCTCGATCACTTCGAAACGGACAAAGTTCTAGGTGGACATCAAGCCGTAA
ATCCTGTGCTCTCGGGCGCCATCAGCGGTCTTCTGTACAAGTCCACCGCG
GCGCCACGGACGGCAGCTCTAGCTTCAGTGTTGGGCGGGTTTGGGGCTGG
TATGTTTTATGTGATTCGAGGACAGCTTGACCGCTTCTTTTATCGTTGAA
GCTTATGCAAGGGGTCCAATATAAAGCtttggagggaaaagcataAAAAT
ACATGTACAAAGA back to topCoding sequence (CDS) from alignment at CM002465.1:525429..526391+ >rna5247 ID=rna5247|Name=rna5247|organism=Nannochloropsis gaditana|type=CDS|length=780bp|location=Sequence derived from alignment at CM002465.1:525429..526391+ (Nannochloropsis gaditana)
ATGTGGGGCTCTCTGCCTTTACGGAGAGTTTTTTTTGCGAGTGGATTTAC
TTGTACATTGAAGCACGACAAGACTACTTACAACAAATGGACCTTGAAAA
ATTGTCAGGATCAAGCCGTTGCTCTGGCTATTCAATTATGCCCCTCTTTG
TCGAGAAAGATATCTCACCTTTTCTTACTCTCGCAATCCTCTCCAGGAAT
GGTCGACAACAACACATCTTCCTCGTACAGCGCATCAGATGACAACCTGC
CCAAAATTGATCTTTTTGGAGGTGGAAACGTGGATCTGCGAACAGTTGCC
CCTCTGTACGGCGTggcaagcgaggaggaacCTGACTACCTGGACTACGA
TATTAAAGGCAGGGGCACGGTGGAACGCATGTTTTTGTATTCGGGTTCTT
CTTATCTGACAGGAATCTTAACCGGTGGTATTCTGGGTGGGCGTAGGGGG
TGGAAGACAGCGCCCAGTCCACGATTCTGGCTTCGACTGAACAGCGTCAT
GAACGGGGCAGGAAAGTTAGGCTCGAAGTGGGGCAACAACGCCGGCGTTT
TCGCTCTTATGTACTCGCTAAGTGAATCGTTGCTCGATCACTTCGAAACG
GACAAAGTTCTAGGTGGACATCAAGCCGTAAATCCTGTGCTCTCGGGCGC
CATCAGCGGTCTTCTGTACAAGTCCACCGCGGCGCCACGGACGGCAGCTC
TAGCTTCAGTGTTGGGCGGGTTTGGGGCTGGTATGTTTTATGTGATTCGA
GGACAGCTTGACCGCTTCTTTTATCGTTGA back to top
|