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Properties
| Property Name | Value |
|---|
| Product | indole-3-glycerol phosphate synthase |
| Orig transcript id | gnl|cribi|Naga_100005g27.6660.mrna |
| Orig protein id | gnl|cribi|Naga_100005g27.6660 |
| Gene | IGPS |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002465.1 | supercontig | CM002465.1:510106..511483 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna5240 ID=rna5240|Name=rna5240|organism=Nannochloropsis gaditana|type=mRNA|length=3904bp
CAGGATACTTCCTTGGTGGCCCAAATCATGTTGGGTCCGGGGGACATGTC
AAGTACACCCGCTGGTCCTGTATGTGATCAATATCCTGAGTGTAATATAA
CGCGGTGCGGGACTGCATTTCAACATGGCCTCGACGCTCTCTGTAGGTCC
TGCAGGTGGCTGGGAACATTAGAAAAGCGATTGACATGGATATCAGAGTC
CTCATGCCAGTGCATCATGCGGCTTCAAGCCTTGTTTTAAAGTTTTAACA
AGAATTACACACGGTACCCACACAGAGATTCTACTTCAGCCATGGTTGAA
GCAAACGAGACACCTTGCCCTGTGGAAGGCTTGCTGTGTCCTACCAAGGG
TCCTAGCTTTATGTCGCTCGTCGAGCGCGTGCTGATAGTCTACAGAGTAA
AACCTTTAATGGGGATCACTGTAGAATCACCCAAGGCTTACACCCTTCGA
TTGGGATGCAGTAGCACTCTCGAAGCAGTTCACACAAGGATTCGTGAGGC
GTTTAAGCCGGAACTGGCTGGCGTGGAGTCATTCCTGGCCCCACACCGAG
TTTGTTCTCAAAGAACTATGCGGATTTGCGGCCATTTATTTGCTCTGCGC
ATCTTCGGCTCATGCATGAGCATGGGCCAATTTTTCGCATGACTCTTCCT
CCAAACACTGACGCGGTAGTCATTTGTGACCCGGAGTTGACGGCTCAGGT
AATTGAAAATCCAAGTGTCTGGCAAAAGACGCATTTTAAGCACAGCCAAG
TGGTGCGGGGGTTCGTCGGCAGAGGTGTCTTCACGGCTGACGACGACGAG
GAGATCTGGGGCATTGCGCATCGCATTCTCTTACCTGCTTTCAGTAATCA
GGGCATGAAACTATATTTTCACTTAGTTCTGGAATGCGTAGATCGCCTTT
TCAAGGAGTGGGACCGTTTAGTTTCTACGAGCCAGCCCATAAACCTAACT
AGGAGCACAGAGCGCTTCACCTTCGACGTTATCGGCAGAGTTGGATTTGG
TTATGACTTCAAGGCCCTTGAAACGGGTACACATCCTTACTTGGAGCAAA
TTCATTTGTCAAGCGAATACAGCGACGCTCGTTGGCAGCAGAGTTTTTTC
CAAAGTGTACTGACAGAGTCTTCTTTTTTGAGGAATTGGTGTGCCTTGAA
CGAGCCTAATATCAAGTTTGTGGAGCGGATCGTGGCCGAACGACTAGCCG
AGCTGGAAAAAGGCATTCGAGTGCAAGAGAAGGATATCTTGACCCTTATG
CTCACAACCAAGGATCCGCAGACAGGCGAGAAATTGCCGCCGGACAATGT
GCGTGACCAGATATTGACTTTCCTATTGGCGGGGCACGACTCCACGTCCA
CAGCCCTCACCGTCCTTTTCATGCTTCTGAGCCAGCACGGTGATGTGGAA
CGTAAAGTGCTGGAGGAGGTGGAGCGTGTAGTAGGAAGTGAACCTTTAAC
TTTTGAAAAACTTGGCCGCCTGCAGTACTGCACCTGCGTTATCAACGAGT
CGCTGCGCCTTTTCCCGCCCGCTCAAGCCACTCGCAAAGATGCTGCGGAA
GATACCATGCTCGGACCTTATAAAATTTCAAAGGGAACGGCCAGCATCGT
GTCGTTGTGGGGTTTAGCGCACAATCCAGAATACTGGCCCGATCCGTGGC
GATTCGATCCAGATCGTTGGCTTCCGGAAAAGGCCAAAGGCCGGAATTCC
TACGCCTCCATCCCATTTTCAGTAGGCCACCGAGGTTGCCTGGGTCGACA
GCTCTCCATAATGGAACAACGCTGCATGCTGGCCATGACAGTGCAGCGCT
ACCATTTGCGGTTGCACAGTCTTTCCAAGCCAAGCTTCACAACTCCTTTG
TTCCTGAAGCCACACAATATCTTCCTTTCCCTTGAACGCCGAGCCTGTTC
TCGCCTGCAGACTCAGGAAGCAAAGTCGCCATTGACATCCGCAGTAGGGG
ACGAAAATGCTCGTCTCAATAGCGGTGCGCGGGCGAAAAGACAAATAAGC
ACCGATAAAGCTTCCGTTCCTTTCAATACTCGGTTGGTAATATTATACGG
GAGTAATATGGGCACTTGCGAGACATTCGCGGGAGAGCTGGCACTACACG
CTGTTAATCTTGGTATGACATCCGACCTGATGAGTTTGGACTCATTTTTG
GATAAGACGGACGTGGTGAATGGCTGTGCTGCTGTGATAGTTATCTGTGC
GACCTACAATGGGACGCCGCCAGATAATGCGGCAAAATTCATTAGTTTAT
TAGAAAAAGAGCCTGACAAAGTTGCAGAGATATTCACAGACACACCCTTC
ACGGTTTTCGGGTGCGGTAACTCCCAGTGGGTACGTACGTACCAAAGCAT
TCCCCGCTTCATAGACAAGACGTTGACAGCTGCGCAGGGAAAGCGTTTGA
CAGCCAACTTTTTGTACGGTGATGCAGACTCCACATTAGACGATGATTTT
CAGGCCTGGAAGTTCGCAATGTGGGAGGGGTTGTCAGATTCCTTGGGGAT
GTCTGGCGCCAGCATGAAGCCGGATGATGGAGCAGCTGGATTAGAGCCAG
CTTATGTCGTCACACCTTGCCAAGCACAGGAGAAATTGGAAGCTGAAAAA
CGTATAGGGGAGATCAGGAGCAAGTGGGCGATCCAAAATGGACTTTTCCT
GGGAAAGGTCTTGAAAAATAAGGAATTACAAAGCGCCAACTCCGATCGCT
CGACGCATCATGTCGAGATAGAATTAGCGGGAGCACAGAAATATTCAGCG
GGAGACCACCTTGCTGTGCAAGGGGGCAATCCACTGGAAGTAGTGAGGCA
AGCTGCCAAGGTACTTGGCCTGGAGTTGAGCGACATGTTTCACATTCGAA
AGGCCAGCTTGGAAGCCGTAAGCTCTTCTATTATACCTGAAGGGGCGAAG
CTATCTGTTGAAATGATCCTCATGTGGTGCGTCGAACTTCAGCAGACGAT
GTCAAAGGCACAACTAGCGATCTTAATGGATCGTGCCTCATGCCCTTATG
AAAAGAAGGCGCTGGAGGCCATGAGGAATGCCTACAATGTGGAAGTCGTC
AAAAGCAAGCGGACTTTGATCGAAGTGCTTGACACATACAACTCTGTCCA
AGTAACTCTGGCCGAGCTCTTGACTCTACTCCCCCCGCTTCGACCACGCT
ATTACTCAATCTCCTCCTCCCCGCTTGCGACGGCTGGGCATGTATCGGTG
ACAGTGGGTGTTGTCCGTGGCGACTCCCCCGCGGGTCGCCTGCACTTAGG
TGTAGCATCAAATTTTCTGGCGAGTAGGAAGGTTGGCCAGCTTGTAGGAT
GTTTTGTGAAGGACACCAAGAGCAACTTCCGCTTGCCGGCTGCAGGAGAC
GTTCCCATAATTTTGGTAGGTCCCGGAACCGGCGTGGCACCTTTTCGGGG
ATTCTTGTACGATAGGGAGGCGTCAAAAGCCACGGGCACTGCCGTTCTCT
TTTTTGGTTGCCGTAATGACGATGATTTTATTTACAGAGAGGAGCTTGAA
GGCTTCAAGGAGCGCGGCGTGCTAAAAGATATGCATGTTGCGTTTTCGCG
GAAACTTTCTGGGCGTAAAGTCTACGTGCAACACCTCATCGAGCAACAAT
CCGAAGAAATGCTCAAAATGCTAGAGGCAGGCGCCTACATCTATGTATGC
GGAGATGCCAAACACATGGCCCCCGATGTCCGCAAGGCCTTTGCTAAAAT
TTTGGCGGAAGGGAAAGGGCTACCCTTATCGGAAGGCGATGCGTTGATTG
ACGAGTTAACAATCCAAAAGCGATACATCGAAGACGTATGGGCATCTGGT
TGAGGAACAACTCGAGGATGTAGACGAACGGATTAAAAAAATTTAGTGGA
CTGCACAAAATAGTTGAATTGACAAAAAGCAAAAGGAGCAAACCTGTGTG
GACA back to topprotein sequence of rna5240 >rna5240-protein ID=rna5240-protein|Name=rna5240|organism=Nannochloropsis gaditana|type=polypeptide|length=369bp
MHLAPGHYFLCLAFLAARLSVAFLMTHVQRSPPHFRTLKTDTHEAKAMPH
KFKIVNKYQGGRAEHSKAHSLNWLEEVQRKNYEVQQLRETEEGSRLLARL
RSVNLVGGYRVARALKRSTGEQVHVMSVIAEIKRRTPTGDTTPTELAAIA
DVGLVARQLADCGADVLMVTTDETCYGGSIMDLRSAREAFADIPDEKRPP
IVAKDIYIHPLQISQAMEHGADGVLLMASLMGASLSGLLDACTCLGLEAL
VEVHTVAELEKALELGATNIVATNWDRIENALYKDQAKGLKGMIPDLIVA
ICAGDVGTVDDAAELADMGYDAVILGRGLATSADITRFISSIRSRESMPS
LLTGAGMMAEDLRRGRREG back to topmRNA from alignment at CM002465.1:510106..511483+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna5240 ID=rna5240|Name=rna5240|organism=Nannochloropsis gaditana|type=mRNA|length=1378bp|location=Sequence derived from alignment at CM002465.1:510106..511483+ (Nannochloropsis gaditana)
ATGCACCTCGCTCCCGGCCACTATTTTCTGTGCTTGGCATTTCTAGCTGC
CCGCCTGAGCGTCGCTTTTCTCATGACTCATGTTCAACGTTCGCCACCAC
ACTTCCGAACATTGAAAACTGATACACACGAGGCAAAAGCGATGCCTCAC
AAATTCAAAATTGTAAACAAGTATCAGGGTGGCAGGGCAGAACATAGCAA
GGCGCATTCCTTGAATTGGCTTGAAGAGGTCCAGCGAAAAAACTACGAAG
TGCAGCAGCTGCGAGAAACAGAGGAAGGGTCTCGCCTCTTGGCCCGATTG
CGTAGCGTTAATTTGGTGGGTGGATATCGCGTGGCACGCGCCTTGAAGCG
CAGCACGGGGGAGCAAGTCCATGTGATGAGCGTGATTGCTGAGATCAAGA
GACGCACACCCACGGGGGACACCACCCCAACCGAGCTGGCTGCCATAGCT
GACGTGGGACTGGTGGCGAGACAGGTGGGCGACAGAGCgggttgaggagg
aaagcataTCAAACGAAATGTCCTCAGCACCAATTATGTACACTGACAGT
TGGCGGACTGCGGCGCAGACGTGCTGATGGTGACAACAGACGAGACGTGC
TACGGAGGATCAATCATGGATCTCCGATCAGCGCGGGAGGCCTTCGCGGA
TATACCGGATGAGAAGCGACCGCCCATCGTTGCGAAGGACATCTACattc
atcctcttcaaatTTCCCAGGCCATGGAACATGGTGCAGACGGTGTTTTA
CTCATGGCGAGCCTGGTGAGTATTTAATTTTTACTTGTGAACGTTAATTC
TTCGTTTCCACCGCAAATGTCCTGTCGAAGCCTTTCGAGGAACGATACAG
CCTTAACTCTGGCACACGATTTAAGAAGAAAGGATATCTCGATCGCTTCT
TGTGACACGACGAGCCAGTCTCAGTATCTTCTCTTATCTATCCCTGCGCA
CGGACCAGATGGGTGCATCTCTGAGTGGACTTCTGGACGCCTGCACTTGC
CTGGGATTGGAGGCTCTGGTTGAGGTGCATACGGTCGCCGAGCTTGAAAA
GGCCTTAGAGCTTGGAGCCACCAATATTGTTGCCACGAACTGGGACAGGA
TCGAAAATGCTTTGTATAAAGACCAAGCCAAGGGACTTAAAGGGATGATT
CCCGACCTGATCGTGGCCATATGCGCGGGTGACGTCGGCACAGTCGACGA
CGCAGCTGAATTAGCGGACATGGGGTACGATGCTGTAATTTTGGGGAGGG
GACTGGCCACATCGGCTGATATAACACGTTTCATATCATCGATTCGGTCG
CGGGAGTCTATGCCAAGCTTGCTCACTGGTGCAGGCATGATGGCCGAAGA
CCTGAGGcgcggaaggcgggagggttga back to topCoding sequence (CDS) from alignment at CM002465.1:510106..511483+ >rna5240 ID=rna5240|Name=rna5240|organism=Nannochloropsis gaditana|type=CDS|length=3330bp|location=Sequence derived from alignment at CM002465.1:510106..511483+ (Nannochloropsis gaditana)
ATGCACCTCGCTCCCGGCCACTATTTTCTGTGCTTGGCATTTCTAGCTGC
CCGCCTGAGCGTCGCTTTTCTCATGACTCATGTTCAACGTTCGCCACCAC
ACTTCCGAACATTGAAAACTGATACACACGAGGCAAAAGCGATGCCTCAC
AAATTCAAAATTGTAAACAAGTATCAGGGTGGCAGGGCAGAACATAGCAA
GGCGCATTCCTTGAATTGGCTTGAAGAGGTCCAGCGAAAAAACTACGAAG
TGCAGCAGCTGCGAGAAACAGAGGAAGGGTCTCGCCTCTTGGCCCGATTG
CGTAGCGTTAATTTGGTGGGTGGATATCGCGTGGCACGCGCCTTGAAGCG
CAGCACGGGGGAGCAAGTCCATGTGATGAGCGTGATTGCTGAGATCAAGA
GACGCACACCCACGGGGGACACCACCCCAACCGAGCTGGCTGCCATAGCT
GACGTGGGACTGGTGGCGAGACAGTTGGCGGACTGCGGCGCAGACGTGCT
GATGGTGACAACAGACGAGACGTGCTACGGAGGATCAATCATGGATCTCC
GATCAGCGCGGGAGGCCTTCGCGGATATACCGGATGAGAAGCGACCGCCC
ATCGTTGCGAAGGACATCTACattcatcctcttcaaatTTCCCAGGCCAT
GGAACATGGTGCAGACGGTGTTTTACTCATGGCGAGCCTGATGGGTGCAT
CTCTGAGTGGACTTCTGGACGCCTGCACTTGCCTGGGATTGGAGGCTCTG
GTTGAGGTGCATACGGTCGCCGAGCTTGAAAAGGCCTTAGAGCTTGGAGC
CACCAATATTGTTGCCACGAACTGGGACAGGATCGAAAATGCTTTGTATA
AAGACCAAGCCAAGGGACTTAAAGGGATGATTCCCGACCTGATCGTGGCC
ATATGCGCGGGTGACGTCGGCACAGTCGACGACGCAGCTGAATTAGCGGA
CATGGGGTACGATGCTGTAATTTTGGGGAGGGGACTGGCCACATCGGCTG
ATATAACACGTTTCATATCATCGATTCGGTCGCGGGAGTCTATGCCAAGC
TTGCTCACTGGTGCAGGCATGATGGCCGAAGACCTGAGGcgcggaaggcg
ggagggttgaATGCACCTCGCTCCCGGCCACTATTTTCTGTGCTTGGCAT
TTCTAGCTGCCCGCCTGAGCGTCGCTTTTCTCATGACTCATGTTCAACGT
TCGCCACCACACTTCCGAACATTGAAAACTGATACACACGAGGCAAAAGC
GATGCCTCACAAATTCAAAATTGTAAACAAGTATCAGGGTGGCAGGGCAG
AACATAGCAAGGCGCATTCCTTGAATTGGCTTGAAGAGGTCCAGCGAAAA
AACTACGAAGTGCAGCAGCTGCGAGAAACAGAGGAAGGGTCTCGCCTCTT
GGCCCGATTGCGTAGCGTTAATTTGGTGGGTGGATATCGCGTGGCACGCG
CCTTGAAGCGCAGCACGGGGGAGCAAGTCCATGTGATGAGCGTGATTGCT
GAGATCAAGAGACGCACACCCACGGGGGACACCACCCCAACCGAGCTGGC
TGCCATAGCTGACGTGGGACTGGTGGCGAGACAGTTGGCGGACTGCGGCG
CAGACGTGCTGATGGTGACAACAGACGAGACGTGCTACGGAGGATCAATC
ATGGATCTCCGATCAGCGCGGGAGGCCTTCGCGGATATACCGGATGAGAA
GCGACCGCCCATCGTTGCGAAGGACATCTACattcatcctcttcaaatTT
CCCAGGCCATGGAACATGGTGCAGACGGTGTTTTACTCATGGCGAGCCTG
ATGGGTGCATCTCTGAGTGGACTTCTGGACGCCTGCACTTGCCTGGGATT
GGAGGCTCTGGTTGAGGTGCATACGGTCGCCGAGCTTGAAAAGGCCTTAG
AGCTTGGAGCCACCAATATTGTTGCCACGAACTGGGACAGGATCGAAAAT
GCTTTGTATAAAGACCAAGCCAAGGGACTTAAAGGGATGATTCCCGACCT
GATCGTGGCCATATGCGCGGGTGACGTCGGCACAGTCGACGACGCAGCTG
AATTAGCGGACATGGGGTACGATGCTGTAATTTTGGGGAGGGGACTGGCC
ACATCGGCTGATATAACACGTTTCATATCATCGATTCGGTCGCGGGAGTC
TATGCCAAGCTTGCTCACTGGTGCAGGCATGATGGCCGAAGACCTGAGGc
gcggaaggcgggagggttgaATGCACCTCGCTCCCGGCCACTATTTTCTG
TGCTTGGCATTTCTAGCTGCCCGCCTGAGCGTCGCTTTTCTCATGACTCA
TGTTCAACGTTCGCCACCACACTTCCGAACATTGAAAACTGATACACACG
AGGCAAAAGCGATGCCTCACAAATTCAAAATTGTAAACAAGTATCAGGGT
GGCAGGGCAGAACATAGCAAGGCGCATTCCTTGAATTGGCTTGAAGAGGT
CCAGCGAAAAAACTACGAAGTGCAGCAGCTGCGAGAAACAGAGGAAGGGT
CTCGCCTCTTGGCCCGATTGCGTAGCGTTAATTTGGTGGGTGGATATCGC
GTGGCACGCGCCTTGAAGCGCAGCACGGGGGAGCAAGTCCATGTGATGAG
CGTGATTGCTGAGATCAAGAGACGCACACCCACGGGGGACACCACCCCAA
CCGAGCTGGCTGCCATAGCTGACGTGGGACTGGTGGCGAGACAGTTGGCG
GACTGCGGCGCAGACGTGCTGATGGTGACAACAGACGAGACGTGCTACGG
AGGATCAATCATGGATCTCCGATCAGCGCGGGAGGCCTTCGCGGATATAC
CGGATGAGAAGCGACCGCCCATCGTTGCGAAGGACATCTACattcatcct
cttcaaatTTCCCAGGCCATGGAACATGGTGCAGACGGTGTTTTACTCAT
GGCGAGCCTGATGGGTGCATCTCTGAGTGGACTTCTGGACGCCTGCACTT
GCCTGGGATTGGAGGCTCTGGTTGAGGTGCATACGGTCGCCGAGCTTGAA
AAGGCCTTAGAGCTTGGAGCCACCAATATTGTTGCCACGAACTGGGACAG
GATCGAAAATGCTTTGTATAAAGACCAAGCCAAGGGACTTAAAGGGATGA
TTCCCGACCTGATCGTGGCCATATGCGCGGGTGACGTCGGCACAGTCGAC
GACGCAGCTGAATTAGCGGACATGGGGTACGATGCTGTAATTTTGGGGAG
GGGACTGGCCACATCGGCTGATATAACACGTTTCATATCATCGATTCGGT
CGCGGGAGTCTATGCCAAGCTTGCTCACTGGTGCAGGCATGATGGCCGAA
GACCTGAGGcgcggaaggcgggagggttga back to top
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