EWM25366.1, cds5227 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM25366.1 vs. NCBI_GenBank
Match: gi|585107127|gb|EWM25366.1| (indole-3-glycerol phosphate synthase [Nannochloropsis gaditana]) HSP 1 Score: 756.518 bits (1952), Expect = 0.000e+0 Identity = 369/369 (100.00%), Postives = 369/369 (100.00%), Query Frame = 0 Query: 1 MHLAPGHYFLCLAFLAARLSVAFLMTHVQRSPPHFRTLKTDTHEAKAMPHKFKIVNKYQGGRAEHSKAHSLNWLEEVQRKNYEVQQLRETEEGSRLLARLRSVNLVGGYRVARALKRSTGEQVHVMSVIAEIKRRTPTGDTTPTELAAIADVGLVARQLADCGADVLMVTTDETCYGGSIMDLRSAREAFADIPDEKRPPIVAKDIYIHPLQISQAMEHGADGVLLMASLMGASLSGLLDACTCLGLEALVEVHTVAELEKALELGATNIVATNWDRIENALYKDQAKGLKGMIPDLIVAICAGDVGTVDDAAELADMGYDAVILGRGLATSADITRFISSIRSRESMPSLLTGAGMMAEDLRRGRREG 369 MHLAPGHYFLCLAFLAARLSVAFLMTHVQRSPPHFRTLKTDTHEAKAMPHKFKIVNKYQGGRAEHSKAHSLNWLEEVQRKNYEVQQLRETEEGSRLLARLRSVNLVGGYRVARALKRSTGEQVHVMSVIAEIKRRTPTGDTTPTELAAIADVGLVARQLADCGADVLMVTTDETCYGGSIMDLRSAREAFADIPDEKRPPIVAKDIYIHPLQISQAMEHGADGVLLMASLMGASLSGLLDACTCLGLEALVEVHTVAELEKALELGATNIVATNWDRIENALYKDQAKGLKGMIPDLIVAICAGDVGTVDDAAELADMGYDAVILGRGLATSADITRFISSIRSRESMPSLLTGAGMMAEDLRRGRREG Sbjct: 1 MHLAPGHYFLCLAFLAARLSVAFLMTHVQRSPPHFRTLKTDTHEAKAMPHKFKIVNKYQGGRAEHSKAHSLNWLEEVQRKNYEVQQLRETEEGSRLLARLRSVNLVGGYRVARALKRSTGEQVHVMSVIAEIKRRTPTGDTTPTELAAIADVGLVARQLADCGADVLMVTTDETCYGGSIMDLRSAREAFADIPDEKRPPIVAKDIYIHPLQISQAMEHGADGVLLMASLMGASLSGLLDACTCLGLEALVEVHTVAELEKALELGATNIVATNWDRIENALYKDQAKGLKGMIPDLIVAICAGDVGTVDDAAELADMGYDAVILGRGLATSADITRFISSIRSRESMPSLLTGAGMMAEDLRRGRREG 369
BLAST of EWM25366.1 vs. NCBI_GenBank
Match: gi|298712952|emb|CBJ26854.1| (Indole-3-glycerol-phosphate synthase (C-terminal region) Indole-3-glycerol-phosphate synthase (N-ter [Ectocarpus siliculosus]) HSP 1 Score: 224.172 bits (570), Expect = 2.300e-66 Identity = 127/295 (43.05%), Postives = 174/295 (58.98%), Query Frame = 0 Query: 77 VQRKNYEVQQL--RETEEGSRLLARLRSVNLVGGYRVARALKRSTG-EQVHVMSVIAEIKRRTPTGDTTPTELAAIADVGLVARQLADCGADVLMVTTDETCYGGSIMDLRSAREAFADIPDEKRPPIVAKDIYIHPLQISQAMEHGADGVLLMASLMGASLSGLLDACTCLGLEALVEVHTVAELEKALELGATNIVATNWDRIENALYKDQAKGLKGMIPDLIVAICAGDVGTVDDAAELADMGYDAVILGRGLATSADITRFISSIRSRESMPSLLTGAGMMAEDLRRGRRE 368 VQRK +E + L T RL RL Y + AL+R+ G EQ H V+A++KRR+PT P ++ A D A QL GA VLMV TD +GGS+ DL F + + PPIVAKD+ +HP+Q++QA+E GA G +L+A ++G +L +DA T +G E +VEVHT AE+EKALE GA+ I+ NWDRI LY QAK ++ +IPD ++ I +G + +V+ A L D GYDAV+LGR L + A I I R +P + G G+ AEDL RR+ Sbjct: 93 VQRKQHETKSLLAAHTASDDRLQMRLSYGASESCYALRSALRRNKGQEQDHQAVVVADMKRRSPTSAELPPDVNAFDDPAAWASQLHTAGASVLMVNTDGPAWGGSLSDLDKVVAHFKKL-GKTPPPIVAKDVIVHPMQMAQALEKGAAGTVLIACVLGPALCDFMDAATMMGTECIVEVHTPAEVEKALEHGASVIMVNNWDRITGKLYPKQAKAVRHLIPDQVLTIASGGIDSVEQAGRLTDEGYDAVVLGRSLVSGASGPELIRGIVDRVGVPRSMLGWGVKAEDLDYDRRK 386
BLAST of EWM25366.1 vs. NCBI_GenBank
Match: gi|510900132|ref|XP_004828797.1| (hypothetical protein BEWA_019770 [Theileria equi] >gi|429327371|gb|AFZ79131.1| hypothetical protein BEWA_019770 [Theileria equi strain WA]) HSP 1 Score: 192.971 bits (489), Expect = 1.343e-52 Identity = 100/250 (40.00%), Postives = 150/250 (60.00%), Query Frame = 0 Query: 95 RLLARLRSVNLVGGYRVARALKRSTGEQVHVMSVIAEIKRRTPTGD-TTPTELAAIADVGLVARQLADCGADVLMVTTDETCYGGSIMDLRSAREAFADIPDEKRPPIVAKDIYIHPLQISQAMEHGADGVLLMASLMGASLSGLLDACTCLGLEALVEVHTVAELEKALELGATNIVATNWDRIENALYKDQAKGLKGMIPDLIVAICAGDVGTVDDAAELADMGYDAVILGRGLATSADITRFISSIR 343 +L RL + ++++ L+R++ E H +SVIA++KRRTPT + ++ + D G VA +A G DV+ V TDE YGG + DL + + KRP IV KDI++HP+QI+QA E+ ADGVLL AS++G +L +L+AC +G EA+VEVH E +A ++GA ++ WDR++N L +A +K +IP+ + I G + T+ A ELA GYDAV GR L D+ FI ++ Sbjct: 101 KLQLRLNFLQCTQNHKLSEMLRRNSDESSHKLSVIADMKRRTPTHNPKCDDKVLSYIDAGEVALNMASAGFDVIFVNTDEIVYGGHVQDLHKSFLELRKLGRRKRPAIVMKDIFLHPIQIAQATEYRADGVLLNASILGNALENMLNACINMGTEAIVEVHDATEALRATDIGARILLVNQWDRVKNILKPTRALDIKDVIPEDVTTIACGGIMTIKQAHELALAGYDAVCFGRRL-IYPDVPEFIKQVK 349
BLAST of EWM25366.1 vs. NCBI_GenBank
Match: gi|697890077|ref|XP_009690280.1| (anthranilate synthase component II [Theileria orientalis strain Shintoku] >gi|403221847|dbj|BAM39979.1| anthranilate synthase component II [Theileria orientalis strain Shintoku]) HSP 1 Score: 192.586 bits (488), Expect = 1.899e-52 Identity = 103/264 (39.02%), Postives = 159/264 (60.23%), Query Frame = 0 Query: 83 EVQQLRE--TEEGSRLLARLRSVNLVGGYRVARALKRSTGEQVHVMSVIAEIKRRTPTGDTT-PTELAAIADVGLVARQLADCGADVLMVTTDETCYGGSIMDLRSAREAFADIPDEKRPPIVAKDIYIHPLQISQAMEHGADGVLLMASLMGASLSGLLDACTCLGLEALVEVHTVAELEKALELGATNIVATNWDRIENALYKDQAKGLKGMIPDLIVAICAGDVGTVDDAAELADMGYDAVILGRGLATSADITRFISSIR 343 EV +L E ++ L RL + +++ L+R++ ++ H +SVIA++KRRTPT + T + + ++ G V +A G D++ V TDE YGG I DL + +RP IV KDI +HP+QI+QA E ADGV+L A+++G L LL C +G+EA+ EVHTVAE K++++G T+I+ WDRI+N LY +A +K +P+ + AI AG + T+D +LA GYDA++LGR L D+ F+ ++ Sbjct: 90 EVDKLIEGHSDPNDNLQLRLNFLQCTSNLKLSDMLRRNSNQKHHKLSVIADMKRRTPTHNPTCDNNVLSYSNAGEVGLSMASVGFDIIFVNTDEVNYGGHINDLYKTFLELRKLGRRERPAIVMKDIILHPIQIAQAAELRADGVILNAAILGKVLGDLLGTCVTMGIEAIAEVHTVAEALKSIDMGFTHIMVNQWDRIKNVLYPTRALEVKEALPENVTAIAAGGIMTMDQVHQLALAGYDAIVLGRRL-IYPDVPDFMKQVK 352
BLAST of EWM25366.1 vs. NCBI_GenBank
Match: gi|1181628853|gb|ORM40827.1| (Indole-3-glycerol phosphate synthase [Babesia sp. Xinjiang]) HSP 1 Score: 184.496 bits (467), Expect = 6.710e-50 Identity = 107/271 (39.48%), Postives = 157/271 (57.93%), Query Frame = 0 Query: 96 LLARLRSVNLVGGYRVARALKRSTGEQVHVMSVIAEIKRRTPTG--DTTPTELAAIADVGLVARQLADCGADVLMVTTDETCYGGSIMDLRSAREAFADIPDEKRPPIVAKDIYIHPLQISQAMEHGADGVLLMASLMGASLSGLLDACTCLGLEALVEVHTVAELEKALELGATNIVATNWDRIENALYKDQAKGLKGMIPDLIVAICAGDVGTVDDAAELADMGYDAVILGRGLATSADITRFISSIRS-RESMPSLLTGAGMMAEDLR 363 L RL V +++ L+R++ H +SVIA++KRRTPT ++ T L I D VA+ +A G DV+ V TDET YGG I +L + RP IV KDI++HP+QI+QA E+ ADGVLL A+++G +L +L AC +G+EA+VEVHT E A+++GAT+++ WDR+ N L +A +K M+ D I AG + EL +GYDAV+LGR L + DI F+ +R R ++L + + D+R Sbjct: 46 LQLRLNFVECTANHKLGEMLRRNSNSNGHALSVIADLKRRTPTHHPNSDGTVLTYI-DAPEVAKNMASIGFDVIFVNTDETVYGGHISELHECFLELRKLGRRTRPAIVMKDIFLHPIQIAQAAEYRADGVLLSAAILGNALKEMLAACVTMGIEAIVEVHTGTEAMMAIDVGATHLLVNQWDRVANVLRPTRALEIKEMVGDDATLIAAGGIIKFSQIHELGLIGYDAVVLGRRLVYN-DIPEFVKQVRDWRAPCKAVLRMSKALFFDIR 314
BLAST of EWM25366.1 vs. NCBI_GenBank
Match: gi|84995456|ref|XP_952450.1| (anthranilate synthase component II, putative [Theileria annulata] >gi|65302611|emb|CAI74718.1| anthranilate synthase component II, putative [Theileria annulata]) HSP 1 Score: 184.111 bits (466), Expect = 3.555e-49 Identity = 101/265 (38.11%), Postives = 152/265 (57.36%), Query Frame = 0 Query: 83 EVQQLRE--TEEGSRLLARLRSVNLVGGYRVARALKRSTGEQVHVMSVIAEIKRRTPTGDT-TPTELAAIADVGLVARQLADCGADVLMVTTDETCYGGSIMDLRSAREAFADIPDEKRPPIVAKDIYIHPLQISQAMEHGADGVLLMASLMGASLSGLLDACTCLGLEALVEVHTVAELEKALELGATNIVATNWDRIENALYKDQAKGLKGMIPDLIVAICAGDVGTVDDAAELADMGYDAVILGRGLATSADITRFISSIRS 344 EV QL E ++ +L RL + +++ L R++ H + VIA++KRRTPT + + + D G VA +A G DV+ V D+ YGG I DL + +RP IV KDI +HP+QI+QA+E ADGV+L A+++G +L LL +C +G+EA+VEVHT A+ ++ E+G TN + WDRI+N LY +A +K ++P+ I AG + T++ LA G DAV GR L D+ FI+ ++S Sbjct: 110 EVDQLIEQHKDQNDKLQLRLNYLQCTSNLKLSDMLSRNSNNTHHKLCVIADMKRRTPTHNPRCDNNVLSYTDAGEVALNMASVGFDVIFVNVDQKNYGGHINDLNKVFLNLRKLGRTQRPAIVMKDIILHPIQIAQAVEMRADGVILNAAILGNALKDLLTSCITMGIEAIVEVHTTADALRSAEIGFTNFMINQWDRIKNILYPTRALEIKEVLPEYATTIAAGGIMTMEQVHMLALAGIDAVCFGRRLV-YPDVPDFINQVKS 373
BLAST of EWM25366.1 vs. NCBI_GenBank
Match: gi|833485378|ref|XP_012767546.1| (hypothetical protein, conserved [Babesia bigemina] >gi|656184739|emb|CDR95360.1| hypothetical protein, conserved [Babesia bigemina]) HSP 1 Score: 179.874 bits (455), Expect = 6.924e-48 Identity = 105/260 (40.38%), Postives = 146/260 (56.15%), Query Frame = 0 Query: 96 LLARLRSVNLVGGYRVARALKRSTGEQVHVMSVIAEIKRRTPTGD-TTPTELAAIADVGLVARQLA-------DCGADVLMVTTDETCYGGSIMDLRSAREAFADIPDEKRPPIVAKDIYIHPLQISQAMEHGADGVLLMASLMGASLSGLLDACTCLGLEALVEVHTVAELEKALELGATNIVATNWDRIENALYKDQAKGLKGMIPDLIVAICAGDVGTVDDAAELADMGYDAVILGRGLATSADITRFISSIRSRES 347 L RL+ V +++ L+R + EQ H +SVIA++KRRTPT T + + D VA+ +A DV+ V TDET YGG I +L + + RP IV KDI IHP+QI+QA E+ ADGVLL AS++G +L ++ AC +G+E +VE+HT E ALE GA N++ WDR+ N L +A +K +I D I AG + ELA MGYDAV+LGR L+ D F+ IR ++ Sbjct: 91 LQLRLKFVECTANHKLGEMLRRHSTEQGHGLSVIADMKRRTPTQHHTLDNSVLSFLDASDVAKSMASQIYFNVQHWFDVIFVNTDETVYGGHISELHACFLELRKLGRRIRPAIVMKDIVIHPIQIAQAAEYRADGVLLNASVLGNTLKEMIIACLNMGIEPIVEIHTKEEAMLALEFGANNLLVNQWDRVHNFLRPTRALEIKNIIGDEATLIAAGGIINFAQVHELALMGYDAVVLGRRLSYD-DTPEFVERIRQWQA 349
BLAST of EWM25366.1 vs. NCBI_GenBank
Match: gi|71030386|ref|XP_764835.1| (hypothetical protein [Theileria parva strain Muguga] >gi|68351791|gb|EAN32552.1| hypothetical protein, conserved [Theileria parva]) HSP 1 Score: 173.326 bits (438), Expect = 4.208e-46 Identity = 92/231 (39.83%), Postives = 136/231 (58.87%), Query Frame = 0 Query: 115 LKRSTGEQVHVMSVIAEIKRRTPTGD-TTPTELAAIADVGLVARQLADCGADVLMVTTDETCYGGSIMDLRSAREAFADIPDEKRPPIVAKDIYIHPLQISQAMEHGADGVLLMASLMGASLSGLLDACTCLGLEALVEVHTVAELEKALELGATNIVATNWDRIENALYKDQAKGLKGMIPDLIVAICAGDVGTVDDAAELADMGYDAVILGRGLATSADITRFISSIRS 344 L+R++ H + VIA++KRRTPT + + + D G VA +A G DV+ V D+ YGG I DL + KRP IV KDI +HP+QI+QA+E ADGV+L A+++G +L LL AC +G+EA+VEVHT A+ ++ ++G + + WDRI+N LY +A +K +PD + I AG + T++ LA G D V GR L D+ FI+ ++S Sbjct: 2 LRRNSNNTHHKLCVIADMKRRTPTHNPKCDNNVLSYTDAGEVAMNMASVGFDVIFVNVDQINYGGHINDLNKVFLNLRKLGRTKRPAIVMKDIILHPIQIAQAVEMRADGVILNAAILGNALQDLLTACVTMGIEAIVEVHTTADALRSADIGFNHFMINQWDRIKNKLYPTRALEIKEALPDNAITIAAGGIMTMEQVHMLALAGIDGVCFGRRLV-CPDVPDFINQVKS 231
BLAST of EWM25366.1 vs. NCBI_GenBank
Match: gi|156085044|ref|XP_001610005.1| (hypothetical protein [Babesia bovis T2Bo] >gi|154797257|gb|EDO06437.1| hypothetical protein BBOV_II004820 [Babesia bovis]) HSP 1 Score: 170.629 bits (431), Expect = 6.147e-45 Identity = 94/250 (37.60%), Postives = 143/250 (57.20%), Query Frame = 0 Query: 96 LLARLRSVNLVGGYRVARALKRSTGEQVHVMSVIAEIKRRTPTGD-TTPTELAAIADVGLVARQLADCGADVLMVTTDETCYGGSIMDLRSAREAFADIPDEKRPPIVAKDIYIHPLQISQAMEHGADGVLLMASLMGASLSGLLDACTCLGLEALVEVHTVAELEKALELGATNIVATNWDRIENALYKDQAKGLKGMIPDLIVAICAGDVGTVDDAAELADMGYDAVILGRGLATSADITRFISSIRS 344 L RL V +++ L++ + + H +SVIA++KRRTPT + + VA+ +A+ G DV+ + TDET YGG + ++ + RP IV KDI +HP+Q++QA E ADGVLL L+G +L +L+AC +G+EA+VEVHT A+ KA++ GA +++ WDR+ N L +A L+ ++ D I I AG + + EL +GYDAV+LGR L DI + I+S Sbjct: 23 LQLRLNFVECTSNHKLGEMLRKHSDSKKHALSVIADMKRRTPTHHPKCDNSVLSYVHAPEVAKNMAEVGFDVVFINTDETVYGGHVSEIYECFLELRKLGRRIRPAIVMKDIILHPIQVAQAAELRADGVLLNGPLLGYTLKSMLEACENMGIEAIVEVHTGADALKAVDAGAQHLMVNQWDRVSNQLRPTRALELREVVGDKITLIAAGGLINIQQIHELGLIGYDAVVLGRRLMYQ-DIPELVQQIKS 271
BLAST of EWM25366.1 vs. NCBI_GenBank
Match: gi|873232701|emb|CEM04600.1| (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 160.614 bits (405), Expect = 1.434e-42 Identity = 94/288 (32.64%), Postives = 165/288 (57.29%), Query Frame = 0 Query: 77 VQRKNYEVQQLRE--TEEGSRLLARLRSVNLVGGYRVARALK--RSTGEQVHVMSVIAEIKRRTPT-GDTTPTELAAIADVGLVARQLADCGADVLMVTTDETCYGGSIMDLRSAREAFA--DIPDEKRPPIVAKDIYIHPLQISQAMEHGADGVLLMASLMGASLSGLLDACTCLGLEALVEVHTVAELEKALELGATNIVATNWDRIENALYKDQAKGLKGMIPDLIVAICAGDVGTVDDAAELADMGYDAVILGRGLATSADITRFISSIRSRESMPSLLTGAGM 357 ++ K EV++L E + + L+ RL+ V +++ +L+ R+ + H +++IA++KR +PT D + + + +D +A L + G D + V TD++ +GGS D+R +E F + +RP I+AKD+ +HPLQ++ A+E GADGV+L + L+G + +++A +G E +VEVHT E + A++ GA I+ WDR++ L QA L+ I ++ I AG + +++ +GYD+V+LGR LA D+ + + +R+ E P L GM Sbjct: 33 IEAKKAEVKRLVEEHSSDMDPLMMRLQYVRSPVNIKISESLRPPRNDSDFCHKLTMIADLKRESPTHPDPSQRRVLSYSDASEMACALTNMGFDAIFVNTDQSFWGGSYDDIRKIKEEFRVRGVRFSERPAIIAKDLMLHPLQMAYAVEMGADGVVLNSLLLGQDMEHMMEAAIVMGCETVVEVHTQQEADDAVKQGANIIMVNQWDRVDGRLSPLQAGKLRDRIHPEVITIVAGGIQDYKQISDIGMLGYDSVVLGRKLADE-DVPQLVDRVRAWEGPPRLTLTMGM 319 The following BLAST results are available for this feature:
BLAST of EWM25366.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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