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Properties
| Property Name | Value |
|---|
| Product | s-adenosylmethionine carrier 1 |
| Orig transcript id | gnl|cribi|Naga_100005g15.6662.mrna |
| Orig protein id | gnl|cribi|Naga_100005g15.6662 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002465.1 | supercontig | CM002465.1:477862..479435 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna5228 ID=rna5228|Name=rna5228|organism=Nannochloropsis gaditana|type=mRNA|length=1719bp
GAAGGAGCCATCAGAGGAATGTGCAGGCCCACTAGGCAAGATAAGCTACA
TCCGCGTGCTAGTAAAATGGCCTTCGTCCTTCTTTTAATAAGAAATACAA
TAGGAAGAAGGGTTGCAAGCGATTCGTTTTCGCCATCAGCTGGTTTTTCA
TGTCAAAGTCCTGTATCTACATTCGTCCGCGCCGGCTCTTGCATTGGCTC
CTACCTACCCGCGAGGTACTCGCTTGGGCGTGGCGGATCGACCATAAGAT
ATCTCACTGAGGATGAGGAGGGAGGCATGATTTTGTCGAAAGGAACGAGA
TCAGTCGTGACAGGATCGAAGCAGAGGAGAGGCCGCAAATCCAAGCCGTG
GCAGGGTCCGTTTGCTTACCATGAGGAGCTGGAACTCACAGTGGAAAGCC
TGACTAACCTTGGTTGGGGGATCTGTCGTGCATCGTTACCTAGTGTACCG
GATGCACAATCCCCCGAAATGCCATTGCCAACGCCTTCTACACCGGGCGG
GCCGAGAGAGAGCCCGGAAGGTTGGGTGGTGATGGTACCGGGAGTGATTC
CCGGCGAGCGAATCCGGCTCCGGATCTATCGCAACCACAAAAACTACTCC
GAGGCAGACTTGATGCATGTGCTTGAGAGTTCGCCTGAGCGCGTCGAACC
CGCGTGCCCTCTCTTCGGCACGTGCGGCGGGTGTCAGTATCAGCACATGA
GCGTTGCGGCCCAGCGAGCCTGGAAACGCGAGCACGTGCTCCAGGTGCTG
GCGCGGACAGGAAACGTGACGGGGGTGGCCGTGCAGGAAACGATAGGGAC
GGAGCATACCCTTGGATACCGGTCCAAGATCACGCCGCATCACGAAAAGC
CGCGAGGGGGGGAGATCCGCGAGATCGGCTTCCTGAAACTCGGGTCTCGG
GCCCTGGTCGACGTGCCAGAGTGCGCCATCGCCACCCCGGCGATCAATGC
CCGCTTGCGCGGACTGCGAGAGGAGGTGCGGGTGACGGCCAGGGCAGCTG
CAGTTGCTGAGACGCCGAGGAAACCGAAAGGGGCGACTTTGCTGCTCCGG
GAGACTCGGGAGGGGGTGGTCACGGACCCGCGGGCAGAGGTCTCGGACCA
GGTGGGGGGCCTCCTCTTCAAGTACACTGCGGGGAGCTTCTTCCAAAACA
ACCCGTATGTATTGCCGCATATGGTTGAATATGTGGTGCGCAAGGCCGGG
GCGCCCAATGTCCGCTACCTGGTGGACGCGTACTGCGGGGGCGGTCTCTT
CTGCCTCTCGGCGAGCAAAAACTTCGAGGCGTGCTACGGCGTGGAAATTA
GCGAGTTGGCCATATTGAGCGCTCAGAGAAACGCGGAGCTGAACAAGATT
GGGAACTGTCACTTCCAGGCGGGGGACGCGACGGACATCTTCGCCGGCAT
CGGCCACATTTCCGGAGCGGACACGGTGACGATCCTCGACCCCCCCCGCA
AGGGCTGCGATGAGGGCTTCTTGACGCAGCTCTGTAGATTTCGCCCAGCC
CGTATTGTGTACGTGAGCTGTGACCCCGCGACACAGGCCAGGGACGCCCG
CTTCCTCCTAGAGCGCGGCTATGACATCGAGGAGGTGCAGCCCTTCGACC
TCTTTCCGCAGACGCGACACATCGAGAACGTCATTGTTTTTGTTGAGGCT
CACCGCACGGGTGCCGGAGCCGGACCCGTGCCTCCCTGGGCCGGTGAAGG
GGGAACAGCGAGCTTATAA back to topprotein sequence of rna5228 >rna5228-protein ID=rna5228-protein|Name=rna5228|organism=Nannochloropsis gaditana|type=polypeptide|length=426bp
MRTSASRPPHWRWTSWFPSSQRASSSWLPLLLVTFLLLSPYLAASSSRQY
ASSTATRTSLSLETRRLGDDVPSKFAQKVVGRPSRRRQRRTSIALADGGR
IQELLARMNSGTRLALAGALAGGFSNMVLYPIDVAKTLRQAGPASRGASL
SSQARIYGLGSLWAGLTPAVLGSMPSSALYFGVYEYVKRRLVAGIRPRTE
ASSSISSDGSKELYHRRVQVLRRWTAHALAAAAGNTASSLIFVPKEVLKQ
QLQMYRNAHGGASLGFPGVFASILREKGVRGLYSGYRATLLRNIPSAVLR
FALYEEFKLYLGGQALSGAISLSGPRVAVVAGALAGALSSAATTPLDVIK
TRMAINACPPGRDVLGCLLDVAQKEGVPGLYAGVRFRVMYSALFTAVGFS
SFEASKALLGVGEAGGEEDAKGSGRH back to topmRNA from alignment at CM002465.1:477862..479435+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna5228 ID=rna5228|Name=rna5228|organism=Nannochloropsis gaditana|type=mRNA|length=1574bp|location=Sequence derived from alignment at CM002465.1:477862..479435+ (Nannochloropsis gaditana)
CTATGGCGCAACGATCTCACACTACATTGCTTTCCACGTTGCACAGGTAG
CTTACAGCAGTACGGCAGAATCGATGAGGACAAGCGCGTCACGTCCACCT
CATTGGCGGTGGACTTCATGGTTTCCATCTTCCCAgcgtgcttcctcctc
atggcttcccctcctgctcgtcactttccttcttctATCGCCGTACTTAg
ccgcgtcttcctcgcgaCAGTATGCTTCCAGCACTGCCACCAGAACATCG
CTTAGTCTAGAAACGAGGCGACTTGGAGATGATGTCCCGTCCAAATTTGC
GCAAAAGGTCGTCGGAAGACCTTCTCGAAGAAGACAGCGACGTACATCTA
TCGCTCTTGCCGACGGGGGTCGAATACAAGAGCTTCTCGCACGGATGAAC
AGCGGCACGCGTCTGGCTTTGGCCGGCGCGTTGGCGGGTGGTTTTAGCAA
CATGGTGCTCTACCCCATCGACGTTGCGAAGACGCTGCGTCAGGCGGGAC
CAGCCTCGAGGGGTGCGTCCCTCTCGTCACAAGCCCGCATCTATGGGTTG
GGCTCCCTGTGGGCAGGCCTGACACCCGCCGTGCTCGgatccatgccctc
ctcaGCGTTGTACTTCGGTGTGTACGAGTATGTAAAGCGCCGTTTGGTCG
CCGGCATCAGGCCGCGCACCGAGGCGTCGTCCTCAATCTCGAGCGACGGG
AGCAAGGAGCTCTACCACCGGCGTGTTCAAGTTCTACGACGCTGGACGGC
TCACGCCTTAGCAGCCGCCGCAGGAAACACCGCCAGTTCTTTAATCTTTG
TACCGAAAGAAGTACTGAAACAGCAGCTGCAGATGTACCGCAACGCCCAC
GGAGGAGCGAGTCTGGGCTTCCCGGGGGTCTTCGCATCCATCCTCAGGGA
GAAGGGCGTCAGAGGCCTTTACAGCGGTTACCGCGCGACGTTGCTTCGCA
ACATCCCGTCGGCTGTCCTCCGCTTTGCTCTCTACGAGGAGTTCAAATTG
TACCTGGGGGGGCAGGCCTTGTCGGGCGCTATCTCCCTGAGTGGACCGCG
CGTGGCCGTGGTCGCGGGAGCCCTAGCCGGAGCCCTCTCGAGCGCAGCCA
CAACTCCTCTCGACGTGATCAAGACGCGCATGGCGATCaacgcctgcccc
cccggccgcGATGTCCTGGGCTGCTTGCTAGACGTTGctcagaaggaggg
ggtgccGGGGCTCTACGCGGGCGTGCGGTTCAGGGTCATGTACTCGGCTC
TCTTCACGGCGGTGggattttcctccttcgaggCGAGCAAGGCCTTGCTG
GGCGttggagaggcagggggggaagaggacgcgaAGGGATCGGGTCGACA
CTAAtgggctggcgggggaaaggggtgaGGGGCCGCGCCCCAACTGGAGC
AGAGAAGTGAGCGGCAGCAAAGTCGTGTTTTGAGATGCGTGAGGTTACGG
TCTGTGGTAAATTTCTGCCCGGCTTGTACAATATCGTGATGGGAGCACAG
GGCGACAAGGAACCCCAGGCCCCGGGGGCGAGCAAGCCCTTTGTAACAAA
GAAACAAATCTTTACCGCATCGGT back to topCoding sequence (CDS) from alignment at CM002465.1:477862..479435+ >rna5228 ID=rna5228|Name=rna5228|organism=Nannochloropsis gaditana|type=CDS|length=1281bp|location=Sequence derived from alignment at CM002465.1:477862..479435+ (Nannochloropsis gaditana)
ATGAGGACAAGCGCGTCACGTCCACCTCATTGGCGGTGGACTTCATGGTT
TCCATCTTCCCAgcgtgcttcctcctcatggcttcccctcctgctcgtca
ctttccttcttctATCGCCGTACTTAgccgcgtcttcctcgcgaCAGTAT
GCTTCCAGCACTGCCACCAGAACATCGCTTAGTCTAGAAACGAGGCGACT
TGGAGATGATGTCCCGTCCAAATTTGCGCAAAAGGTCGTCGGAAGACCTT
CTCGAAGAAGACAGCGACGTACATCTATCGCTCTTGCCGACGGGGGTCGA
ATACAAGAGCTTCTCGCACGGATGAACAGCGGCACGCGTCTGGCTTTGGC
CGGCGCGTTGGCGGGTGGTTTTAGCAACATGGTGCTCTACCCCATCGACG
TTGCGAAGACGCTGCGTCAGGCGGGACCAGCCTCGAGGGGTGCGTCCCTC
TCGTCACAAGCCCGCATCTATGGGTTGGGCTCCCTGTGGGCAGGCCTGAC
ACCCGCCGTGCTCGgatccatgccctcctcaGCGTTGTACTTCGGTGTGT
ACGAGTATGTAAAGCGCCGTTTGGTCGCCGGCATCAGGCCGCGCACCGAG
GCGTCGTCCTCAATCTCGAGCGACGGGAGCAAGGAGCTCTACCACCGGCG
TGTTCAAGTTCTACGACGCTGGACGGCTCACGCCTTAGCAGCCGCCGCAG
GAAACACCGCCAGTTCTTTAATCTTTGTACCGAAAGAAGTACTGAAACAG
CAGCTGCAGATGTACCGCAACGCCCACGGAGGAGCGAGTCTGGGCTTCCC
GGGGGTCTTCGCATCCATCCTCAGGGAGAAGGGCGTCAGAGGCCTTTACA
GCGGTTACCGCGCGACGTTGCTTCGCAACATCCCGTCGGCTGTCCTCCGC
TTTGCTCTCTACGAGGAGTTCAAATTGTACCTGGGGGGGCAGGCCTTGTC
GGGCGCTATCTCCCTGAGTGGACCGCGCGTGGCCGTGGTCGCGGGAGCCC
TAGCCGGAGCCCTCTCGAGCGCAGCCACAACTCCTCTCGACGTGATCAAG
ACGCGCATGGCGATCaacgcctgcccccccggccgcGATGTCCTGGGCTG
CTTGCTAGACGTTGctcagaaggagggggtgccGGGGCTCTACGCGGGCG
TGCGGTTCAGGGTCATGTACTCGGCTCTCTTCACGGCGGTGggattttcc
tccttcgaggCGAGCAAGGCCTTGCTGGGCGttggagaggcaggggggga
agaggacgcgaAGGGATCGGGTCGACACTAA back to top
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