EWM25368.1, cds5215 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM25368.1 vs. NCBI_GenBank
Match: gi|585107129|gb|EWM25368.1| (s-adenosylmethionine carrier 1 [Nannochloropsis gaditana]) HSP 1 Score: 842.417 bits (2175), Expect = 0.000e+0 Identity = 426/426 (100.00%), Postives = 426/426 (100.00%), Query Frame = 0
Query: 1 MRTSASRPPHWRWTSWFPSSQRASSSWLPLLLVTFLLLSPYLAASSSRQYASSTATRTSLSLETRRLGDDVPSKFAQKVVGRPSRRRQRRTSIALADGGRIQELLARMNSGTRLALAGALAGGFSNMVLYPIDVAKTLRQAGPASRGASLSSQARIYGLGSLWAGLTPAVLGSMPSSALYFGVYEYVKRRLVAGIRPRTEASSSISSDGSKELYHRRVQVLRRWTAHALAAAAGNTASSLIFVPKEVLKQQLQMYRNAHGGASLGFPGVFASILREKGVRGLYSGYRATLLRNIPSAVLRFALYEEFKLYLGGQALSGAISLSGPRVAVVAGALAGALSSAATTPLDVIKTRMAINACPPGRDVLGCLLDVAQKEGVPGLYAGVRFRVMYSALFTAVGFSSFEASKALLGVGEAGGEEDAKGSGRH 426
MRTSASRPPHWRWTSWFPSSQRASSSWLPLLLVTFLLLSPYLAASSSRQYASSTATRTSLSLETRRLGDDVPSKFAQKVVGRPSRRRQRRTSIALADGGRIQELLARMNSGTRLALAGALAGGFSNMVLYPIDVAKTLRQAGPASRGASLSSQARIYGLGSLWAGLTPAVLGSMPSSALYFGVYEYVKRRLVAGIRPRTEASSSISSDGSKELYHRRVQVLRRWTAHALAAAAGNTASSLIFVPKEVLKQQLQMYRNAHGGASLGFPGVFASILREKGVRGLYSGYRATLLRNIPSAVLRFALYEEFKLYLGGQALSGAISLSGPRVAVVAGALAGALSSAATTPLDVIKTRMAINACPPGRDVLGCLLDVAQKEGVPGLYAGVRFRVMYSALFTAVGFSSFEASKALLGVGEAGGEEDAKGSGRH
Sbjct: 1 MRTSASRPPHWRWTSWFPSSQRASSSWLPLLLVTFLLLSPYLAASSSRQYASSTATRTSLSLETRRLGDDVPSKFAQKVVGRPSRRRQRRTSIALADGGRIQELLARMNSGTRLALAGALAGGFSNMVLYPIDVAKTLRQAGPASRGASLSSQARIYGLGSLWAGLTPAVLGSMPSSALYFGVYEYVKRRLVAGIRPRTEASSSISSDGSKELYHRRVQVLRRWTAHALAAAAGNTASSLIFVPKEVLKQQLQMYRNAHGGASLGFPGVFASILREKGVRGLYSGYRATLLRNIPSAVLRFALYEEFKLYLGGQALSGAISLSGPRVAVVAGALAGALSSAATTPLDVIKTRMAINACPPGRDVLGCLLDVAQKEGVPGLYAGVRFRVMYSALFTAVGFSSFEASKALLGVGEAGGEEDAKGSGRH 426
BLAST of EWM25368.1 vs. NCBI_GenBank
Match: gi|1210520348|dbj|GAX20779.1| (hypothetical protein FisN_7Hh090 [Fistulifera solaris]) HSP 1 Score: 196.438 bits (498), Expect = 1.562e-55 Identity = 130/302 (43.05%), Postives = 167/302 (55.30%), Query Frame = 0
Query: 113 RLALAGALAGGFSNMVLYPIDVAKTLRQAGP---ASRGASLSSQARIYGLGSLWAGLTPAVLGSMPSSALYFGVYEYVKRRLVAGIRPRTEASSSISSDGSKELYHRRVQVLRRWTAHALAAAAGNTASSLIFVPKEVLKQQLQMYRNAHGGASLGFPGVFASILREKGVRGLYSGYRATLLRNIPSAVLRFALYEEFKLYLGGQALSGAISLSGPRVAVVAGALAGALSSAATTPLDVIKTRMAINACPPGRDVLGCLLDVAQKEGVPGLYAGVRFRVMYSALFTAVGFSSFEASKALLGV 411
R+ +G +AG +LYPID AKTLRQA P +S A+L S + Y G+ PA +G++P+SALYFG YE +K L+ R A H+ V R HA AAA+GN SS+IFVPKE +KQQLQ G+S A + G+RGLY GY+ATLLRNIPSA LRF LYEE K L A+ G AGA++GAL+S TP+DV+KTRM++ CP D+ GC V G LYAG R+++S LF+A GF +FE K + V
Sbjct: 73 RVGWSGGIAGAVGTTLLYPIDSAKTLRQANPEQFSSVWAALWSSRQWY------RGVVPAAIGAIPASALYFGAYEAMKSLLLQVQVQRQPA-------------HQPPTVASRLLLHASAAASGNILSSMIFVPKEFIKQQLQY------GSSTSIQHCVA----QHGLRGLYRGYQATLLRNIPSAALRFVLYEELKYALYTSRGEDAV---GSWRLFAAGAVSGALASGFLTPMDVLKTRMSVGQCP--VDLPGCFHHVLDTAGWTALYAGAGSRMLFSGLFSAAGFGTFETVKRWMKV 340
BLAST of EWM25368.1 vs. NCBI_GenBank
Match: gi|1210529626|dbj|GAX11720.1| (hypothetical protein FisN_7Lh090 [Fistulifera solaris]) HSP 1 Score: 195.667 bits (496), Expect = 1.308e-54 Identity = 132/305 (43.28%), Postives = 169/305 (55.41%), Query Frame = 0
Query: 113 RLALAGALAGGFSNMVLYPIDVAKTLRQAGPA---SRGASLSSQARIYGLGSLWAGLTPAVLGSMPSSALYFGVYEYVKRRLVAGIRPRTEASSSISSDGSKELYHRRVQVLRRWTAHALAAAAGNTASSLIFVPKEVLKQQLQMYRNAHGGASLGFPGVFASILREKGVRGLYSGYRATLLRNIPSAVLRFALYEEFK--LYLG-GQALSGAISLSGPRVAVVAGALAGALSSAATTPLDVIKTRMAINACPPGRDVLGCLLDVAQKEGVPGLYAGVRFRVMYSALFTAVGFSSFEASKALLGV 411
R+ +G +AG +LYPID AKTLRQA P S A+L S + Y G+ PA +G++P+SALYFG YE +K L+ R A H+ V R HA AAA+GN SS+IFVPKE +KQQLQ G+S A + G+RGLY GY+ATLLRNIPSA LRF LYEE K LY G+ G+ L AGA++GAL+S TP+DV+KTRM++ CP D+ GC V G LYAG R+++S LF+A GF +FE K + V
Sbjct: 121 RVGWSGGIAGAVGTTLLYPIDSAKTLRQANPEQFPSVWAALWSSRQWY------RGVVPAAVGAIPASALYFGAYEAMKSLLLQVQVQRQPA-------------HQPPTVSSRLLLHASAAASGNILSSMIFVPKEFIKQQLQY------GSSTSIQHCLA----QHGLRGLYRGYQATLLRNIPSAALRFVLYEELKYALYTSRGEEAVGSWRL------FAAGAVSGALASGFLTPMDVLKTRMSVGQCPV--DLPGCFHHVLDTAGWTALYAGAGSRMLFSGLFSAAGFGTFETVKRWMKV 388
BLAST of EWM25368.1 vs. NCBI_GenBank
Match: gi|873233625|emb|CEM02746.1| (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 191.815 bits (486), Expect = 1.615e-53 Identity = 125/324 (38.58%), Postives = 189/324 (58.33%), Query Frame = 0
Query: 115 ALAGALAGGFSNMVLYPIDVAKTLRQ-------AGPASR---GASLSSQARI---YGLGSLWAGLTPAVLGSMPSSALYFGVYEYVKRRLVAGIRPRTEASSSISSDGSKELYHRRVQVLRRWTAHALAAAAGNTASSLIFVPKEVLKQQLQMYRNAHGGAS--LGFPGVFASILREKGVRGLYSGYRATLLRNIPSAVLRFALYEEFKLYLGGQALSGAISLSG---------PRVAVVAGALAGALSSAATTPLDVIKTRMAINACPPGRDVLGCLLDVAQKEGVPGLYAGVRFRVMYSALFTAVGFSSFEASKALLGVGEA 414
ALAG LAG F+ VL+P+D K Q G R G +L + I G+G+L++G P+VLG++PSSALYFG YE VK R + + R +S +G + + + V +R +ALAAA+GN S+++FVPKE +KQQLQ ++ GA L + + ++E G++G+Y GYRATL+RN+PS+VLRF+++EE K + ++ + L P +AGA+AGA+SS TTP+D +KT +A + L + +++G+ L AG++ RV+YS LF+AVG SFEA K+ L V ++
Sbjct: 18 ALAGGLAGSFATAVLHPVDTVKVYIQIERRREHTGHHHRPSLGDTLRTMRAIRKEKGIGALYSGFLPSVLGALPSSALYFGAYELVKSRATSVLEARRR---RLSGEGGCQ--NGPLPVQQRAFVNALAAASGNAVSAMVFVPKEFVKQQLQASKSGAIGAGQILSSVDILWAAVKESGIKGVYRGYRATLVRNVPSSVLRFSVFEELKRLIVSTCVTPSSQLPSFSLRSAAYLPVYLFLAGAVAGAVSSGLTTPMDNVKTNIATRQLSQDMSIGQNLRTLWKEQGMSSLLAGMKTRVLYSGLFSAVGLGSFEAFKSALRVSDS 336
BLAST of EWM25368.1 vs. NCBI_GenBank
Match: gi|219115469|ref|XP_002178530.1| (predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1] >gi|217410265|gb|EEC50195.1| predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 178.718 bits (452), Expect = 2.113e-50 Identity = 105/241 (43.57%), Postives = 141/241 (58.51%), Query Frame = 0
Query: 163 WAGLTPAVLGSMPSSALYFGVYEYVKRRLVAGIRPRTEASSSISSDGSKELYHRRVQVLRRWTAHALAAAAGNTASSLIFVPKEVLKQQLQMYRNAHGGASLGFPGVFASILREKGVRGLYSGYRATLLRNIPSAVLRFALYEEFKLYLGGQALSGAISLSGPRVAVVAGALAGALSSAATTPLDVIKTRMAINACPPGRDVLGCLLDVAQKEGVPGLYAGVRFRVMYSALFTAVGFSSFE 403
+AG+ PA LG++PSSALYFG YE +K I+ R A+ DG L+ HALAAA+GN SS +FVPKE +KQQ+Q Y+ G V ++++KG RGLYSGY ATL+RNIPSA+LRF LYEE K S AGA+AG+L+S TP+DV+KTR++ CP D+ GC+ + ++G GLYAG R+++S F ++GF SFE
Sbjct: 1 YAGVIPATLGAIPSSALYFGAYESMKMF----IKNRIPAAED---DGKNRLW-----------IHALAAASGNIMSSAVFVPKETIKQQMQFYQAGSVGQ------VCVKLVQQKGFRGLYSGYCATLMRNIPSAMLRFVLYEELKFRWHTNQESSRNHSQFSWKLFAAGAVAGSLASGFMTPIDVMKTRLSTGTCPI--DMPGCMNHIIAEQGWKGLYAGAGSRMLWSGAFASIGFGSFE 215
BLAST of EWM25368.1 vs. NCBI_GenBank
Match: gi|544212455|ref|XP_005534947.1| (similar to mitochondrial carrier protein [Cyanidioschyzon merolae strain 10D] >gi|449016938|dbj|BAM80340.1| similar to mitochondrial carrier protein [Cyanidioschyzon merolae strain 10D]) HSP 1 Score: 176.407 bits (446), Expect = 1.373e-47 Identity = 116/305 (38.03%), Postives = 172/305 (56.39%), Query Frame = 0
Query: 126 NMVLYPIDVAKTLRQAGPASRGASLSSQ----ARIYGLGSLWAGLTPAVLGSMPSSALYFGVYEYVKRRLVAGIRPRT--EASSSISSDGSKELYHRRVQVLRRWTAHALAAAAGNTASSLIFVPKEVLKQQLQMYRNAHGGASLGFPGVFASILREKGVRGLYSGYRATLLRNIPSAVLRFALYEEFKLYLGGQALSGAISLSGPRVA-------------VVAGALAGALSSAATTPLDVIKTRMAI--NACPPGRDVLGCLLDVAQKEGVPGLYAGVRFRVMYSALFTAVGFSSFEASKALL 409
N VL+PID K++RQA R S S R G G+L+ G+ PAVLG+ SSA+YFG YE V+ LV + R + S ++ +++ + + +R H +AAA+GN SS IFVPKEV+KQ+LQ R + + + +RGLY GYRATLLRN+P+A+L F LYEE KL +G + + G R ++AG+LAGALSS TTP DV+KTR ++ R ++ ++ ++EG+ GL+ GV R +++ +F+A+GF+++E K LL
Sbjct: 53 NSVLHPIDTIKSVRQADTWRRSQSTWSVFWQLVRESGPGALYRGVVPAVLGAATSSAVYFGTYESVRALLVWYEQQRHCRAKTGSQATHSARDAHLVARSLSKRGLIHMIAAASGNVVSSFIFVPKEVIKQRLQTGRES----------TVREVFAHQHLRGLYWGYRATLLRNVPNAMLNFVLYEELKLRIGQLRTAVQQCMGGSRTQTTQTTEAFPTLDLLMAGSLAGALSSTLTTPFDVLKTRFGTASSSAVASRSLMSLAAEILRQEGLGGLFRGVGTRAVWAGMFSAIGFTTYERCKDLL 347
BLAST of EWM25368.1 vs. NCBI_GenBank
Match: gi|298715585|emb|CBJ28138.1| (mitochondrial carrier protein-like [Ectocarpus siliculosus]) HSP 1 Score: 171.785 bits (434), Expect = 4.312e-46 Identity = 134/294 (45.58%), Postives = 175/294 (59.52%), Query Frame = 0
Query: 129 LYPIDVAKTLRQAGP-ASRGA--SLSSQARIYGLGSLWAGLTPAVLGSMPSSALYFGVYEYVKRRLVAGIRPRTEASSSISSDGSKELYHRRVQVLRRWTAHALAAAAGNTASSLIFVPKEVLKQQLQMYRNAHGGASLGF-PGVFASILREKGVRGLYSGYRATLLRNIPSAVLRFALYEEFKLYLGGQALSGAISLSGPRVAVVAGALAGALSSAATTPLDVIKTRMAINACPPGRDVLGCLLDVAQKEGVPGLYAGVRFRVMYSALFTAVGFSSFEASKALLGVGEAGGEE 418
L+PID AKTLRQA P A +G +L+ R G +++ G+ AV+G+MPSSALYFG YE VK RL+ + + + V R AHA+AAA GN ASSLIFVPKE +KQ LQ G + + ++EKGV+GLY GY ATL RN+PSA++RF+LYEE KL++G L +S P ++AGALAGA +S TTP DV+KTR+A + GR + + +G GLYAG + RV+ S LFTAVGF SFEA K +LGV +E
Sbjct: 42 LFPIDTAKTLRQANPKAFKGTRDALAHICRTRGPWAIYTGIPTAVVGAMPSSALYFGTYEAVKTRLMR-VAANNFPAGPGGPREGEGGGGGGVHPAARAAAHAVAAACGNAASSLIFVPKEYVKQTLQASGMGAAGGARETAKEIVRRTVKEKGVKGLYRGYWATLSRNVPSAIIRFSLYEEIKLFIGPARL-----MSAPPAYLLAGALAGACASGMTTPFDVLKTRVATGSLEGGRGFAKNMATIVADDGWKGLYAGFQPRVVMSGLFTAVGFGSFEAIKVVLGVSPLPPDE 329
BLAST of EWM25368.1 vs. NCBI_GenBank
Match: gi|971507597|dbj|GAQ90610.1| (mitochondrial substrate carrier family protein [Klebsormidium nitens]) HSP 1 Score: 152.91 bits (385), Expect = 1.182e-38 Identity = 118/317 (37.22%), Postives = 160/317 (50.47%), Query Frame = 0
Query: 124 FSNMVLYPIDVAKTLRQA--GPASRGASLSSQARIY---GLGSLWAGLTPAVLGSMPSSALYFGVYEYVKRRLVAGIRPRTEASSSISSDGSKELYHRRVQVLRRWTAHALAAAAGNTASSLIFVPKEVLKQQLQMYRNAHGGASLGFPGVFASILREKGVRGLYSGYRATLLRNIPSAVLRFALYEEFKLYLGGQALSGAISLSGPRVAVVAGALAGALSSAATTPLDVIKTRMAINA--------------------------CPPGRDVLGCLLDVAQKEGVPGLYAGVRFRVMYSALFTAVGFSSFEASKALL 409
F+N L+P+D KT Q G A + ++ G+ + GL AV+GS+PSSA+YFG YE K L+ R A ++ R AAA GN ASS I VPKE++KQ+LQ G GV ASI+RE+GV+GLY GY A LLRN+PS V+ F+ +E K G A SG L P ++++GA+AG LS+AATTPLDV+KTR+ A P G V+ L ++ +EG GL G R++Y F+A+GF SFE +K +L
Sbjct: 23 FTNATLHPLDTVKTKLQTKGGTALYTGAWDVVRKVLAKQGIRGFYRGLPAAVVGSIPSSAVYFGTYELGKELLL-----RLPAFAN-----------------NRLAVPPFAAAVGNIASSAILVPKELVKQRLQAGVAGTAG------GVLASIVREEGVKGLYRGYSAALLRNVPSNVISFSTFEYLKA--GWLAGSGDAELQ-PWQSLLSGAVAGMLSAAATTPLDVVKTRLMTEARQAVSRTGATGKVAEAVAKAQFVSAFTPSG--VVSTLRQISAEEGFKGLVRGAGPRIVYGGCFSAMGFLSFETAKHIL 306
BLAST of EWM25368.1 vs. NCBI_GenBank
Match: gi|1149750188|ref|XP_020197643.1| (protein MITOFERRINLIKE 1, chloroplastic [Aegilops tauschii subsp. tauschii]) HSP 1 Score: 149.828 bits (377), Expect = 1.555e-37 Identity = 110/286 (38.46%), Postives = 157/286 (54.90%), Query Frame = 0
Query: 129 LYPIDVAKTLRQAGPASRGA--SLSSQARIYGLGSLWAGLTPAVLGSMPSSALYFGVYEYVKRRLVAGIRPRTEASSSISSDGSKELYHRRVQVLRRWTAHALAAAAGNTASSLIFVPKEVLKQQLQMYRNAHGGASLGFP-GVFASILREKGVRGLYSGYRATLLRNIPSAVLRFALYEEFKLYLGGQALSGAISLSGPRVAVVAGALAGALSSAATTPLDVIKTRMA--INACPPGRDVLGCLLDVAQKEGVPGLYAGVRFRVMYSALFTAVGFSSFEASKALL 409
L P+D KT QAG ASRG+ + R G L+ GL+ +LGS SSA+YFG E K L RP L + LA A+GN +SS I VPKE++ Q+LQ GA+ G V IL+ G GLY+GY ATLLRN+P+ VL ++ +E K + + S A +L+ P +V+ GALAGA+S+ TTPLDV+KTR+ + A R V+G + +V +EG+ GL G+ RV++SA F A+G+ +FE ++ ++
Sbjct: 100 LLPLDAVKTRLQAGAASRGSWQVFADILRADGPLGLYRGLSAVILGSATSSAIYFGTCELAKSLL----RPH----------------------LPPFLVPPLAGASGNISSSAIMVPKELITQRLQ------SGAATGRSWQVLLQILQNDGFFGLYAGYAATLLRNLPAGVLSYSSFEYLKAF--ALSKSSAANLT-PGESVLCGALAGAISAGLTTPLDVVKTRLMTRVGAAQGSRTVVGTMQEVIAEEGLMGLSRGIGPRVLHSACFAAIGYCAFETARLMI 350
BLAST of EWM25368.1 vs. NCBI_GenBank
Match: gi|960469333|ref|XP_014754790.1| (PREDICTED: protein MITOFERRINLIKE 1, chloroplastic [Brachypodium distachyon] >gi|944076204|gb|KQK11688.1| hypothetical protein BRADI_2g61677 [Brachypodium distachyon]) HSP 1 Score: 146.362 bits (368), Expect = 2.508e-36 Identity = 108/282 (38.30%), Postives = 151/282 (53.55%), Query Frame = 0
Query: 129 LYPIDVAKTLRQAGPASRGA--SLSSQARIYGLGSLWAGLTPAVLGSMPSSALYFGVYEYVKRRLVAGIRPRTEASSSISSDGSKELYHRRVQVLRRWTAHALAAAAGNTASSLIFVPKEVLKQQLQMYRNAHGGASLGFP-GVFASILREKGVRGLYSGYRATLLRNIPSAVLRFALYEEFKLYLGGQALSGAISLSGPRVAVVAGALAGALSSAATTPLDVIKTRMAINACPPG-RDVLGCLLDVAQKEGVPGLYAGVRFRVMYSALFTAVGFSSFEASK 406
L PID KT QAG ASRG+ R G L+ GL+ +LGS SSA+YFG E K L RP L + LA A+GN +SS I VPKE++ Q+LQ GA+ G V IL+ G GLY+GY ATLLRN+P+ VL ++ +E K + + ++ P +V+ GALAGA+S+A TTPLDV+KTR+ G R V+G + +V +EG+ GL G+ R+++SA F A+G+ +FE ++
Sbjct: 99 LLPIDAVKTRLQAGAASRGSWQVFLDILRADGPLGLYRGLSAVILGSASSSAIYFGTCELAKSLL----RPH----------------------LPPFLVPPLAGASGNISSSAIMVPKELITQRLQ------SGAAKGRSWQVLLQILQADGFFGLYAGYTATLLRNLPAGVLSYSSFEYLKAFTLKHSDRENMT---PGESVLCGALAGAISAALTTPLDVVKTRLMTRVGTEGSRTVVGTMREVVAEEGLMGLSRGIGPRILHSACFAAIGYCAFETAR 345 The following BLAST results are available for this feature:
BLAST of EWM25368.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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