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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100115g10.6577.mrna |
| Orig protein id | gnl|cribi|Naga_100115g10.6577 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002455.1 | supercontig | CM002455.1:1309337..1312247 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna521 ID=rna521|Name=rna521|organism=Nannochloropsis gaditana|type=mRNA|length=1287bp
ATGATTATATTCTTTTTTGCTATCACGTGCCGGACTTTCCGTTTGAAGCA
CAGGCCTAAACGCAAGGGACCAAGCTGTCCGAACACCGCTAGGCAGCACT
CGGCGCAATATATACTGCTTTCACCCCGGGGCATCCCTCCTCCTGCCATC
CTTATGTCTTATATGCTTTGTGCCTTTTTCCTCTTCCATCTACCTACAGA
AAGCTCAACAACTAGGATTAAAAACGAGAAAACCTTAAGCATGCAGCTCC
ACCGTACTCTTATTGGCCTTGCCGCCCTTGTGCCTTTTCTTGCTCTAACC
AGCGCTGAGGTCGAGCAATTTGAGATCTTTCCTGGACAAGCCACATGGGA
CAGCTCCATTGAACTTCCTGGTATGTCCTCGAAAGCTGCCACTCGCGGAC
GGACGGACGGTGAGCCCACAACTGCTGAAGGCCACTGTTGCGGGATGAAA
GGCTTGGGCGGTGCTACCATTGAAGTCATGTGCCACCCCGAAACGGTGGC
CATGGGGAAGCCTTTCACGGTCAATGTGAAGTACACCAGCGACATCAAAC
GCCCTGTGGATGTGCACGTCGACGTTCTGAACGCGCACACCAAGGCTTTT
TACGCTGGGAAATGGGAGGAATTTGACACGCAGGCCGGCGAAGTCTCCCT
GACGATTCAAATGCCGTCGTGGGGGGTGGAAGAACCCTTCCTCTGGAAGG
TGTTCCTGACGCCCCGTGGCGAGCCCTTCCCCAACATGTTGGCGGAGACC
GGCTTTGTGGCCCACTTGGCGGACTACGTGAAGAACGATTGCGCGCCTTT
CAAGTCCTACGGCTTTGACCCCCCTGAGCTGGCCAACAACGTCAAGACGG
TCGATTTCGTCGCCCTGCAGAAGGTGCCCGCCGTCCTCACGCCCGGGTCC
CAGGCCATGGTGGACGTGGAATACAACTTGGTGGGCGCCGCCAAGGCCAT
CCTCTCTGTCGCCTTGATGCGCAAGGGCCCCAACACCATCATTTCCTCTT
TTGCCGACCTGGCCGCACCTGGACAGAACAAGGTCAGCCTGCCCCTTCCC
GTCCCCTATGATGCGCCCAAGGAGGCTGTGTACATAGTGGTCACATTGAC
GCCCGACGGCGCGAGCTGGGAGGATCGGTTGGCCGAGGACCAGCTCCTTG
GTGCGAACCAGGGCGAGAGCGTGCAGGCGAAGGTGAGGTGTGAGAATTGC
TGGGTCCGTAGGAGATTGAATAGTGGAGCAGGAGGGGAGGATGGTCGAAC
GAGGGTTGCCTTGCATGTATTTTACTGTTTTCATTGA back to topprotein sequence of rna521 >rna521-protein ID=rna521-protein|Name=rna521|organism=Nannochloropsis gaditana|type=polypeptide|length=246bp
MGKQDRGSRPLCFKFVVYPDKEGEEGQAEKGKEIRTTWCSDELGLVAGKK
EEILQHRSLRFATYPYVLQMSRSGIVFRGHNDMKVLALLAVFLAAVASVS
AFLTVPSHRCALSTQSSTANIRKHFGTTSARSARNAMLVMKVMPGGNKGE
NERLRTLESDSERWFQEQERREANGEIGLLENPAFYTAIFFLCPLVILVA
SAATGVIPGFISTPSTYSTLDEVKSSLSYGELTSAAEYASGASSLF back to topmRNA from alignment at CM002455.1:1309337..1312247- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna521 ID=rna521|Name=rna521|organism=Nannochloropsis gaditana|type=mRNA|length=2911bp|location=Sequence derived from alignment at CM002455.1:1309337..1312247- (Nannochloropsis gaditana)
ATGGGCAAGCAGGATAGAGGGTCTAGACCGCTTTGCTTCAAATTTGTGGT
CTATCCTGACAAAGAGGGAGAGGAGGGTAGAAAGAGGATGAGGAACAGAG
GCAGTGAGCTTTCCCACTATAGGTCAGGCTGAGAAAGGGAAGGAGATAAG
AACGACGTGGTGTAGTGACGAACTCGGACTCGTTGCAGGGAAAAAAGAAG
AAATATTACAGCATAGATCTTTAAGATTTGCTACTTACCCGTATGTATTG
CAAATGTCGAGAAGTGTCGACATCACAGACTCAAGGTCGACTCGACGTGT
CGAGTGGTAACACCTGATTTGGAGAAGGGGAAGATCGAAAAGATCGGATC
TTGTCGGTGTTTCCTGGCGTGCGACGCGATCGGCCCTGGGTGCTGGCGTC
GTCCCACTATGACAGGGGCCACAGCAGTACATTCAGCCTATTACTCACGA
CATTATTGGCACACACACACCAGGTGGCATTGTTTTCCGTGGTCATAACG
ACATGAAGGTCCTTGCTCTGCTGGCAGTGTTCCTGGCCGCGGTTGCTTCC
GTCTCTGCCTTTCTCACTGTTCCGTCTCATCGTTGTAAGTGCAGCGTGGA
GCATTATTGGAGAGTGGGCGTCCATGCCCGCGAACATGAAGAAAATAGAG
ATTGTTTAGAGATGTTCTTTGAACCGCGAAAGGTCATCGGTGGTGGGCGC
GTGTGCGTTGGCATTGGATCTGACCCATGCTTTCTGTAATGAAAATGTGA
AAGATAACGTGACCTGTATTTTATCCATACAATTTCTTCAGGTGCGCTAA
GCACACAGAGCAGTACAGCCAATATCCGCAAGCACTTTGGTACGACTAGT
GCACGCAGTGCACGCAATGCTATGCTTGTGATGAAAGTCATGCCGGGAGG
TAACAAAGGGGAAAACGAGCGGTTGCGAACGTTGGAATCGGATTCAGAGC
GTTGGTTCCAAGAGCAGGAACGACGAGAGGCGAATGGCGAGATAGGTGAG
GCATCGTTGAAAGGCTCGAAGTTTGAAGGCTTGCACATGAGCGAAGCCAG
CCTGACGTGTCTTCCCGCTCGGGGGGGACTTTTCCCATCGGGAATGGCAT
GCCATCGTGATGCCAACCTACCCATCGATGGACCACTTAATAAGACAAAA
ACACCTCCTTATCTTTCTCCTTGGTTTCACTCCTGCTGTCTTCCAGGCTT
GCTGGAAAATCCTGCTTTTTACACGGCCATTTTCTTCCTCTGCCCCCTGG
TCATTCTGGTCGCCAGCGCCGCCACGGGCGTCATTCCGGGCTTCATCTCG
ACTCCCTCCACTTACTCTACACTGGATGAAGTGAAGAGTAGTCTGTCGTA
TGGAGAGCTGACCAGCGCCGCGGAGTACGCCTCGGGAGCTTCCTCGTTGT
TTTGAAGGTGACCGCGAGAATTTCCTTGGTTTCGAAGGGGAGGCCGACGG
GGCTGATGGCGCTGTTGCAACGATTAAATTTAAGGATGTAGAGCAATTAT
GATGGATGATGAGGAATTAAAGCGGCAGGAGGGGAACTGGAACAATGTGG
ATTGACGTGACGGGTGGGCCTGAGATAGGAAAGTGTTCGATGCGGGAGAA
GTCACGAAGATAGAAGGAGAAAAATATGGGAACGGCAGGGGCGGGTAGAT
TACAAAATTGCAAACTGGAGGTGTACATATGGAAAAGCTAGGGGAAAGCA
TAGAAGGGATCAAGCAGGTGGTGGCTGAAACGAAGAGAGCTTGTTCCAAG
GCGTCGATCCCCCCCCCCGGAGGTTTCTCCTTGCAAGGGCGATGCTGCTC
ATTTAAGACCCATCGTGCGGGGGGTTTGTTCGGACATCATAGAGAGCCAA
GCGCTGTGTTACCCTCGCGAAATTGAGCGGATTGGATTGAAGGGAGTGCG
CGGCCGGTATAAATCGCTGGGTGACATGCACCTTTAAATCATTTACTCTC
TTGCATGGATAAAATATACACACACCGAGTTGACACGACCCAAAACGCAC
GTGAAAAGGCAATAATGGCAGGGAAAAACCTAGAGCCAGAACCGGCATAA
ATTCCACTGGCACCAGCCTGCAGGCTGTGATAATGTCTGAGTGTGGCAGC
ATTCGTCAGCCTGGGATGTGAAGCAAGAAAATGGACGAGTTTCCACATCA
TAGGGATAAAATCATCATGTATCTCGTTGTTCATTCTTCAGATTGAGTAT
GTCTCGCCCTGCCGTGCATGCCAGTGCCGGTCGTGGGCACGTGTGAAGGT
CTTGGCCTCCGCACAGAACAGCCACGTAGAGAGCGCATGTCCCTTCATAC
CAATCATTCTTCTGTCAAATATACACTCTGAGCCTATCGTGCTGTGGAGC
GCACACAAAACACATGGATTCTATTCGAAGAAGCTTTTCCGTGTGTGCGC
ACGTAACGACGGCCGAGTTGGCGTCCAGAAATTAAAAAAACACTACAATG
TACTTGGATGTGCTGTCTTCCAAGGAATGGAGAACCGTCAAGCGATGTCT
TCTGCGCACTGGACACCAAGTACCTGGGCATGGCTTCTCCCCTTCTGCCC
CCCGCCAGTCCACGGCCACCTCTTGTGTCGGGCCCCATTCCCCTCCGTTA
GCACCACCTCCCTCTCTACCTATACCGCTTGGTGTCACATCCTATTGTTT
TGCACTTACACATGATGATGCATACGTGCCTATGTTTCCACGCTCAATGA
AAACAGTAAAATACATGCAAGGCAACCCTCGTTCGACCATCCTCCCCTCC
TGCTCCACTATTCAATCTCCTACGGACCCAGCAATTCTCACACCTCACCT
TCGCCTGCACGCTCTCGCCCTGGTTCGCACCAAGGAGCTCTTTACTCGCG
ACGCATGCGAGTGCCCGCCATCTTGGTGCGGTAAGTACGGTCCTCGGCCA
ACCGATCCTCC back to topCoding sequence (CDS) from alignment at CM002455.1:1309337..1312247- >rna521 ID=rna521|Name=rna521|organism=Nannochloropsis gaditana|type=CDS|length=3705bp|location=Sequence derived from alignment at CM002455.1:1309337..1312247- (Nannochloropsis gaditana)
GCTTGCTGGAAAATCCTGCTTTTTACACGGCCATTTTCTTCCTCTGCCCC
CTGGTCATTCTGGTCGCCAGCGCCGCCACGGGCGTCATTCCGGGCTTCAT
CTCGACTCCCTCCACTTACTCTACACTGGATGAAGTGAAGAGTAGTCTGT
CGTATGGAGAGCTGACCAGCGCCGCGGAGTACGCCTCGGGAGCTTCCTCG
TTGTTTTGAGTGCGCTAAGCACACAGAGCAGTACAGCCAATATCCGCAAG
CACTTTGGTACGACTAGTGCACGCAGTGCACGCAATGCTATGCTTGTGAT
GAAAGTCATGCCGGGAGGTAACAAAGGGGAAAACGAGCGGTTGCGAACGT
TGGAATCGGATTCAGAGCGTTGGTTCCAAGAGCAGGAACGACGAGAGGCG
AATGGCGAGATAGGTGGCATTGTTTTCCGTGGTCATAACGACATGAAGGT
CCTTGCTCTGCTGGCAGTGTTCCTGGCCGCGGTTGCTTCCGTCTCTGCCT
TTCTCACTGTTCCGTCTCATCGTTGTCAGGCTGAGAAAGGGAAGGAGATA
AGAACGACGTGGTGTAGTGACGAACTCGGACTCGTTGCAGGGAAAAAAGA
AGAAATATTACAGCATAGATCTTTAAGATTTGCTACTTACCCGTATGTAT
TGCAAATGTCGAGAAATGGGCAAGCAGGATAGAGGGTCTAGACCGCTTTG
CTTCAAATTTGTGGTCTATCCTGACAAAGAGGGAGAGGAGGGCTTGCTGG
AAAATCCTGCTTTTTACACGGCCATTTTCTTCCTCTGCCCCCTGGTCATT
CTGGTCGCCAGCGCCGCCACGGGCGTCATTCCGGGCTTCATCTCGACTCC
CTCCACTTACTCTACACTGGATGAAGTGAAGAGTAGTCTGTCGTATGGAG
AGCTGACCAGCGCCGCGGAGTACGCCTCGGGAGCTTCCTCGTTGTTTTGA
GTGCGCTAAGCACACAGAGCAGTACAGCCAATATCCGCAAGCACTTTGGT
ACGACTAGTGCACGCAGTGCACGCAATGCTATGCTTGTGATGAAAGTCAT
GCCGGGAGGTAACAAAGGGGAAAACGAGCGGTTGCGAACGTTGGAATCGG
ATTCAGAGCGTTGGTTCCAAGAGCAGGAACGACGAGAGGCGAATGGCGAG
ATAGGTGGCATTGTTTTCCGTGGTCATAACGACATGAAGGTCCTTGCTCT
GCTGGCAGTGTTCCTGGCCGCGGTTGCTTCCGTCTCTGCCTTTCTCACTG
TTCCGTCTCATCGTTGTCAGGCTGAGAAAGGGAAGGAGATAAGAACGACG
TGGTGTAGTGACGAACTCGGACTCGTTGCAGGGAAAAAAGAAGAAATATT
ACAGCATAGATCTTTAAGATTTGCTACTTACCCGTATGTATTGCAAATGT
CGAGAAATGGGCAAGCAGGATAGAGGGTCTAGACCGCTTTGCTTCAAATT
TGTGGTCTATCCTGACAAAGAGGGAGAGGAGGGCTTGCTGGAAAATCCTG
CTTTTTACACGGCCATTTTCTTCCTCTGCCCCCTGGTCATTCTGGTCGCC
AGCGCCGCCACGGGCGTCATTCCGGGCTTCATCTCGACTCCCTCCACTTA
CTCTACACTGGATGAAGTGAAGAGTAGTCTGTCGTATGGAGAGCTGACCA
GCGCCGCGGAGTACGCCTCGGGAGCTTCCTCGTTGTTTTGAGTGCGCTAA
GCACACAGAGCAGTACAGCCAATATCCGCAAGCACTTTGGTACGACTAGT
GCACGCAGTGCACGCAATGCTATGCTTGTGATGAAAGTCATGCCGGGAGG
TAACAAAGGGGAAAACGAGCGGTTGCGAACGTTGGAATCGGATTCAGAGC
GTTGGTTCCAAGAGCAGGAACGACGAGAGGCGAATGGCGAGATAGGTGGC
ATTGTTTTCCGTGGTCATAACGACATGAAGGTCCTTGCTCTGCTGGCAGT
GTTCCTGGCCGCGGTTGCTTCCGTCTCTGCCTTTCTCACTGTTCCGTCTC
ATCGTTGTCAGGCTGAGAAAGGGAAGGAGATAAGAACGACGTGGTGTAGT
GACGAACTCGGACTCGTTGCAGGGAAAAAAGAAGAAATATTACAGCATAG
ATCTTTAAGATTTGCTACTTACCCGTATGTATTGCAAATGTCGAGAAATG
GGCAAGCAGGATAGAGGGTCTAGACCGCTTTGCTTCAAATTTGTGGTCTA
TCCTGACAAAGAGGGAGAGGAGGGCTTGCTGGAAAATCCTGCTTTTTACA
CGGCCATTTTCTTCCTCTGCCCCCTGGTCATTCTGGTCGCCAGCGCCGCC
ACGGGCGTCATTCCGGGCTTCATCTCGACTCCCTCCACTTACTCTACACT
GGATGAAGTGAAGAGTAGTCTGTCGTATGGAGAGCTGACCAGCGCCGCGG
AGTACGCCTCGGGAGCTTCCTCGTTGTTTTGAGTGCGCTAAGCACACAGA
GCAGTACAGCCAATATCCGCAAGCACTTTGGTACGACTAGTGCACGCAGT
GCACGCAATGCTATGCTTGTGATGAAAGTCATGCCGGGAGGTAACAAAGG
GGAAAACGAGCGGTTGCGAACGTTGGAATCGGATTCAGAGCGTTGGTTCC
AAGAGCAGGAACGACGAGAGGCGAATGGCGAGATAGGTGGCATTGTTTTC
CGTGGTCATAACGACATGAAGGTCCTTGCTCTGCTGGCAGTGTTCCTGGC
CGCGGTTGCTTCCGTCTCTGCCTTTCTCACTGTTCCGTCTCATCGTTGTC
AGGCTGAGAAAGGGAAGGAGATAAGAACGACGTGGTGTAGTGACGAACTC
GGACTCGTTGCAGGGAAAAAAGAAGAAATATTACAGCATAGATCTTTAAG
ATTTGCTACTTACCCGTATGTATTGCAAATGTCGAGAAATGGGCAAGCAG
GATAGAGGGTCTAGACCGCTTTGCTTCAAATTTGTGGTCTATCCTGACAA
AGAGGGAGAGGAGGGCTTGCTGGAAAATCCTGCTTTTTACACGGCCATTT
TCTTCCTCTGCCCCCTGGTCATTCTGGTCGCCAGCGCCGCCACGGGCGTC
ATTCCGGGCTTCATCTCGACTCCCTCCACTTACTCTACACTGGATGAAGT
GAAGAGTAGTCTGTCGTATGGAGAGCTGACCAGCGCCGCGGAGTACGCCT
CGGGAGCTTCCTCGTTGTTTTGAGTGCGCTAAGCACACAGAGCAGTACAG
CCAATATCCGCAAGCACTTTGGTACGACTAGTGCACGCAGTGCACGCAAT
GCTATGCTTGTGATGAAAGTCATGCCGGGAGGTAACAAAGGGGAAAACGA
GCGGTTGCGAACGTTGGAATCGGATTCAGAGCGTTGGTTCCAAGAGCAGG
AACGACGAGAGGCGAATGGCGAGATAGGTGGCATTGTTTTCCGTGGTCAT
AACGACATGAAGGTCCTTGCTCTGCTGGCAGTGTTCCTGGCCGCGGTTGC
TTCCGTCTCTGCCTTTCTCACTGTTCCGTCTCATCGTTGTCAGGCTGAGA
AAGGGAAGGAGATAAGAACGACGTGGTGTAGTGACGAACTCGGACTCGTT
GCAGGGAAAAAAGAAGAAATATTACAGCATAGATCTTTAAGATTTGCTAC
TTACCCGTATGTATTGCAAATGTCGAGAAATGGGCAAGCAGGATAGAGGG
TCTAGACCGCTTTGCTTCAAATTTGTGGTCTATCCTGACAAAGAGGGAGA
GGAGG back to top
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