EWM30152.1, cds521 (CDS) Nannochloropsis gaditana

Overview
NameEWM30152.1
Unique Namecds521
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002455.1:1312172..1312247 -
Alignment locationCM002455.1:1311985..1312125 -
Alignment locationCM002455.1:1311664..1311774 -
Alignment locationCM002455.1:1311253..1311456 -
Alignment locationCM002455.1:1310843..1311051 -

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Properties
Property NameValue
Protein idEWM30152.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100115g10.6577.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002455.1supercontigCM002455.1:1312172..1312247 -
CM002455.1supercontigCM002455.1:1311985..1312125 -
CM002455.1supercontigCM002455.1:1311664..1311774 -
CM002455.1supercontigCM002455.1:1311253..1311456 -
CM002455.1supercontigCM002455.1:1310843..1311051 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
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BLAST of EWM30152.1 vs. NCBI_GenBank
Match: gi|585112808|gb|EWM30152.1| (hypothetical protein Naga_100115g10 [Nannochloropsis gaditana])

HSP 1 Score: 508.064 bits (1307), Expect = 0.000e+0
Identity = 246/246 (100.00%), Postives = 246/246 (100.00%), Query Frame = 0 
Query:    1 MGKQDRGSRPLCFKFVVYPDKEGEEGQAEKGKEIRTTWCSDELGLVAGKKEEILQHRSLRFATYPYVLQMSRSGIVFRGHNDMKVLALLAVFLAAVASVSAFLTVPSHRCALSTQSSTANIRKHFGTTSARSARNAMLVMKVMPGGNKGENERLRTLESDSERWFQEQERREANGEIGLLENPAFYTAIFFLCPLVILVASAATGVIPGFISTPSTYSTLDEVKSSLSYGELTSAAEYASGASSLF 246
            MGKQDRGSRPLCFKFVVYPDKEGEEGQAEKGKEIRTTWCSDELGLVAGKKEEILQHRSLRFATYPYVLQMSRSGIVFRGHNDMKVLALLAVFLAAVASVSAFLTVPSHRCALSTQSSTANIRKHFGTTSARSARNAMLVMKVMPGGNKGENERLRTLESDSERWFQEQERREANGEIGLLENPAFYTAIFFLCPLVILVASAATGVIPGFISTPSTYSTLDEVKSSLSYGELTSAAEYASGASSLF
Sbjct:    1 MGKQDRGSRPLCFKFVVYPDKEGEEGQAEKGKEIRTTWCSDELGLVAGKKEEILQHRSLRFATYPYVLQMSRSGIVFRGHNDMKVLALLAVFLAAVASVSAFLTVPSHRCALSTQSSTANIRKHFGTTSARSARNAMLVMKVMPGGNKGENERLRTLESDSERWFQEQERREANGEIGLLENPAFYTAIFFLCPLVILVASAATGVIPGFISTPSTYSTLDEVKSSLSYGELTSAAEYASGASSLF 246
The following BLAST results are available for this feature:
BLAST of EWM30152.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585112808|gb|EWM30152.1|0.000e+0100.00hypothetical protein Naga_100115g10 [Nannochlorops... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna521rna521Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications