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Properties
| Property Name | Value |
|---|
| Product | Six-bladed beta-propeller, TolB |
| Orig transcript id | gnl|cribi|Naga_100583g2.5691.mrna |
| Orig protein id | gnl|cribi|Naga_100583g2.5691 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002465.1 | supercontig | CM002465.1:413585..414969 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna5203 ID=rna5203|Name=rna5203|organism=Nannochloropsis gaditana|type=mRNA|length=1474bp
GACCCCTGCCAATTATTAGACCCGTCCCACGGCCATAGATCCCACGTTAT
TTGTGTACTCACAAGGCGGTCTCCGCCCTCTTTCGATGCATCTATGCCTA
TTGACTTGCTCCTCATGTCGTTCACGGGGGTCGAACTCCGTTTCAAAACA
TTACCAGCAGACTCACAGGGTCGTGTCACATAGAGTAACGCGCTCTCAGC
CCGGTGGACTGCGTCTTACACGCTAATTGCCGTGTATAGGACGCCTCCAA
ATGCAACAAAAGAATAAAGGGCACACAAGATGCGGGAGGTGGTCATTGCT
TTCGGTGGCAGGCCTAGTAGGGTTCACCGTAGCCCTAGGAATGCACCACA
CGCACGCGTTCGTCGCGCCTATTGCACCCCATGGCCTTCCAGAGAATCTG
AGAGTGGTTCGGCACCGACACCAGCTTGGATCGCAGACATGTCAATTGGT
GCAGACGCCCCGATTCTGGTCCCCTTTCACAGGACAGCTGAGGGGCAAGA
GTGGTAGCAGTCGGTTGCACGCGCGCATTTCGGAGAAGCCAGGGGATAAG
CAAGATAGAGAGGAAGGCGGGGAGCAAGGCTTGCCGAAGGTTCTAGAAGA
AGGTTTACCTAAGCTGACACGACAGCAAGAAGAGGCGGTGGACCTGTCAA
TGGGCGTGATACCTCCCGAGCAGGAGCCGCTTTCTGGCGAGGCCTGGACG
GCCGAGGTGGAGAAACGGCTGCAGGAGATGTATGAGAAGGGCACGTACGA
CCCCACGCCCGTGAATCTGACGCCCAAAGAGCTGGCGAACCAGCAGTGGG
TGGACGACTTCCTGAACAAGGAAGAGCGACCCATCCGGTTCACGCCCGAG
TACTGGTTCGGCACCTGGACGCGGGGGGACATCAAGTTCTCCTCCGCCGG
CCGTGGCCTGAAATCCTTCGGCTTCGCGCTCGTGGGCATCGGGCTGGTCA
CGCTCATGTTCTTGCTCGAGGACGAGCTGGTCAACCCGGCGTTCGACGAC
TACCGGCAGTGGGACGGGAACGACTTCTTCCACTTCGGGGAGGACCTAGG
GGCCTGGGTAACCGCCATTCCCGCCCGGACCTCGGACTACCTCTCCCATT
TCAATTGGGTAGAGTGGAGCGCCCGCGTGGCCGCGCGTGCAGGCGCGGCG
CCCCGGTGGCAGAACCAGCTCTTGGGCCTCCCCGCGATCCCCCCCCAGTG
ATCACTTGAACCAGTGCCCCCCACTCCCGCATGTATCCTGAGACCGCCAT
CCAGAGCCCCCCCTCCCTAGCCCCTTCCTCCCCCGGCGCATTGCAGCCGG
CGGCGTTTCACATCCTGGCAGCATGTGGATTTAAAGAAGGACATCAAATT
GAAGAGACAGGAAGAATCAACGGCCGACAGCATGCGTGTCCTTCGCTTCC
TTTGTGGCGGTTATTTTATTTTGCATCGATCACTTGCATGGCCATCTGCA
CTCATGGACTCAATTCCAGCCCTC back to topprotein sequence of rna5203 >rna5203-protein ID=rna5203-protein|Name=rna5203|organism=Nannochloropsis gaditana|type=polypeptide|length=397bp
MAGPSTSVTTYNAKKRKPAGCIEETPIIQRLLGSNSAWLRIWNEDIEGED
IDSEIAFSPQGRYAAVSLQGGSVLIWDLSTLPHVVLRLDLPPHMPLQTQA
TVPRRSSKSRGRGGRGRGRGGGSSGDRAVENDVEYVVVGLSWSSRAHKLL
VTYHQRGGGSASSSYLCLWHLPSAAVEGHAYFPDCLIGPAQLSPVDDSLC
AYFLSGSVCLRLQHLRGSQPAQEGREVLLSPSREGAGGTLGSGDGHRLGL
CAFGRDGRSLFCVSARERRVFKVDTDSLAVLARSPEILAGAKLVVLKTLM
SRDGSCLFVFSNRAAHLLETHGLRAAEAVGDFGAIKVEWGCWSVGPSRNL
GPGEGGGRRRRGGTWNSWWWWVSPVPSAATACRSGCSFGGSGAWAAA back to topmRNA from alignment at CM002465.1:413585..414969- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna5203 ID=rna5203|Name=rna5203|organism=Nannochloropsis gaditana|type=mRNA|length=1385bp|location=Sequence derived from alignment at CM002465.1:413585..414969- (Nannochloropsis gaditana)
AGACCCAGGAGAGACGATAAATATATATTTGGTCCTCTGTGTATCACCTT
GTCTGCAGTACTGAACTCTTTACAGCACATTTACGTATTCCTGAAGGCAG
GCAGGGTGATTGTCGTCGTACTTGTGTTGTTTTGGGTGTTTTCAAAGCCT
TAATACGTGTCCACTCGACAGGAAAGAGATGGCAGGTCCGTCAACATCAG
TTACAACCTACAACGCAAAAAAGAGGAAGCCCGCAGGATGCATCGAGGAG
ACCCCAATAATCCAAAGATTGCTCGGGAGCAACAGTGCCTGGCTCAGGAT
CTGGAATGAGGACATTGAGGGGGAGGACATCGACTCGGAAATCGCCTTCA
GTCCCCAGGGGAGGTATGCTGCCGTCAGCCTGCAAGGTGGCAGCGTGCTC
ATTTGGGACTTGAGCACCCTTCCTCACGTAGTCCTGCGCTTGGACTTGCC
CCCACACATGCCTTTGCAGACGCAGGCTACAGTGCCACGTCGGAGCAGTA
AGAGCAGGGGCCGGGGTGGTCGAGGGAGGGGGCGCGGCGGCGGGAGCTCA
GGGGACAGGGCTGTTGAAAACGACGTAGAATACGTGGTGGTGGGGTTGAG
TTGGTCCAGCCGGGCTCACAAGCTCCTAGTCACGTACCATCAACGAGGCG
GAGGAAGTGCTTCCTCCTCCTACCTGTGTCTGTGGCATCTGCCCTCGGCT
GCGGTGGAGGGACATGCCTACTTCCCCGACTGTCTCATCGGGCCCGCCCA
GCTCTCCCCGGTGGACGATTCCCTCTGCGCGTACTTCCTATCGGGTTCCG
TCTGTCTTCGTCTGCAGCACTTGCGCGGTTCGCAGCCAGCGCAGGAGGGC
CGGGAGGTGCTCCTAAGCCCGTCCAGGGAGGGCGCCGGCGGGACCCTGGG
GAGTGGGGATGGCCACCGTCTCGGTCTGTGTGCCTTTGGTCGCGACGGGA
GAAGCCTGTTCTGCGTGAGCGCGCGGGAGAGGCGCGTGTTCAAGGTGGAC
ACAGACTCTCTGGCCGTACTGGCCCGAAGCCCGGAGATCCTGGCGGGCGC
CAAGCTGGTGGTGCTCAAGACGCTTATGTCCCGGGACGGGAGCTGTCTCT
TCGTCTTCAGCAACCGCGCGGCGCACCTGTTGGAGACGCACGGCCTGCGA
GCCGCGGAGGCCGTGGGAGACTTCGGCGCCATCAAGGTGGAGTGGGGGTG
CTGGAGTGTGGGACCGAGTCGGAACCTGGGGCCGGGGGAGGGGGGGGGGC
GGAGGAGGAGAGGAGGGACTTGGAACAGCTGGTGGTGGTGGGTGTCCCCT
GTCCCTTCAGCCGCGACAGCGTGCAGGAGCGGTTGTTCGTTTGGCGGGTC
CGGCGCTTGGGCAGCGGCCTGAACGGGCGCGGCGG back to topCoding sequence (CDS) from alignment at CM002465.1:413585..414969- >rna5203 ID=rna5203|Name=rna5203|organism=Nannochloropsis gaditana|type=CDS|length=1194bp|location=Sequence derived from alignment at CM002465.1:413585..414969- (Nannochloropsis gaditana)
ATGGCAGGTCCGTCAACATCAGTTACAACCTACAACGCAAAAAAGAGGAA
GCCCGCAGGATGCATCGAGGAGACCCCAATAATCCAAAGATTGCTCGGGA
GCAACAGTGCCTGGCTCAGGATCTGGAATGAGGACATTGAGGGGGAGGAC
ATCGACTCGGAAATCGCCTTCAGTCCCCAGGGGAGGTATGCTGCCGTCAG
CCTGCAAGGTGGCAGCGTGCTCATTTGGGACTTGAGCACCCTTCCTCACG
TAGTCCTGCGCTTGGACTTGCCCCCACACATGCCTTTGCAGACGCAGGCT
ACAGTGCCACGTCGGAGCAGTAAGAGCAGGGGCCGGGGTGGTCGAGGGAG
GGGGCGCGGCGGCGGGAGCTCAGGGGACAGGGCTGTTGAAAACGACGTAG
AATACGTGGTGGTGGGGTTGAGTTGGTCCAGCCGGGCTCACAAGCTCCTA
GTCACGTACCATCAACGAGGCGGAGGAAGTGCTTCCTCCTCCTACCTGTG
TCTGTGGCATCTGCCCTCGGCTGCGGTGGAGGGACATGCCTACTTCCCCG
ACTGTCTCATCGGGCCCGCCCAGCTCTCCCCGGTGGACGATTCCCTCTGC
GCGTACTTCCTATCGGGTTCCGTCTGTCTTCGTCTGCAGCACTTGCGCGG
TTCGCAGCCAGCGCAGGAGGGCCGGGAGGTGCTCCTAAGCCCGTCCAGGG
AGGGCGCCGGCGGGACCCTGGGGAGTGGGGATGGCCACCGTCTCGGTCTG
TGTGCCTTTGGTCGCGACGGGAGAAGCCTGTTCTGCGTGAGCGCGCGGGA
GAGGCGCGTGTTCAAGGTGGACACAGACTCTCTGGCCGTACTGGCCCGAA
GCCCGGAGATCCTGGCGGGCGCCAAGCTGGTGGTGCTCAAGACGCTTATG
TCCCGGGACGGGAGCTGTCTCTTCGTCTTCAGCAACCGCGCGGCGCACCT
GTTGGAGACGCACGGCCTGCGAGCCGCGGAGGCCGTGGGAGACTTCGGCG
CCATCAAGGTGGAGTGGGGGTGCTGGAGTGTGGGACCGAGTCGGAACCTG
GGGCCGGGGGAGGGGGGGGGGCGGAGGAGGAGAGGAGGGACTTGGAACAG
CTGGTGGTGGTGGGTGTCCCCTGTCCCTTCAGCCGCGACAGCGTGCAGGA
GCGGTTGTTCGTTTGGCGGGTCCGGCGCTTGGGCAGCGGCCTGA back to top
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