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Properties
Property Name | Value |
Product | hypothetical protein |
Orig transcript id | gnl|cribi|Naga_100583g3.5693.mrna |
Orig protein id | gnl|cribi|Naga_100583g3.5693 |
Gbkey | mRNA |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
CM002465.1 | supercontig | CM002465.1:410562..412035 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna5202 ID=rna5202|Name=rna5202|organism=Nannochloropsis gaditana|type=mRNA|length=1797bp ATGAGCCCCACCAGGACCGCGTTGCCCGCTGGAGGCATTTCCGGACAGGG CATGAAAACCATTCAGCAAACGCCAACTCATCATCAAGACTCATTTGAGG ATGATATATCGAGTAAATTGAATCGGCGAGGATGGTCTACTGAAGAAGAT GCATGCATTTTGAAGCTGGTCCGCGCGCACGGGACCAAGAATTGGACTGT TATTGCGCAAGGTCTGGCCGAGAAATTGGGTGGACCAGGCCGTTCTGGGA AGCAATGTCGCACGCGATGGCTCAACCACTTGAATCCTGATATCAAAAAG GCACCCTGGACAGCCCAGGAAGAAGCTATCGTGCAGGATGCGCAACAACG ACTGGGAAATCGATGGGCTATCATCGCCAAACTGCTACCCGGAAGAACGG ATAACAGCATCAAAAACTACTATTACTCAACTATGAGGAAAAATATGCGC AGACTTGCAAAATCTCATGGTAAAGATGCGCCGGTTGCGAAAGCGTGCGG ACCAGCCGGTGCCACGGGCTTGGGGCCGCCTGCGGGGGTTAGAGAAAGCT CAACAAGAACCGGGAAGAAGGGAGCCTCGTCCAGCGTGGCAACCGCCGCT GGAGCCTACGATACTCCAGCAAGCTTACAAGTGCAAGACAAATGTGTGCA CGAGAATGGCCAGTCCAAATCGACGAAACGAGTTCGAACAGGCGTGGGGG AGAAGGGGAAACGCGGCGCACAAAGCACTAAAAACAAGGCAGAAGTTGTG ACAGATGACGCCGCCCAATTCTTCATAACGGCAGGATTTAGTCCATATGG ACAAAACACGGGCTTTGGTTCAGGCTTGCCGGCAGGGGCACCGGCAGGGG CAGGCATGGGAGGCTATTACGCGGTCGAGTCCCCAGCGGGTCCTCCCTCT TCCTCCACGGTCGGCCAATCCCTGCACATGCATCGCCTCGCAGAAATGCT GAACGGGGATAATGCCACCGGGGACTTAGCGTTGGCGTCCCCCATGTCGA GTAATCGTGCGGGACTCTTGGGCCCTGTGGATGACAACTCTTTCTTCGCC GAGCAACTGCAGCGTCAAATGTCTAGCAACCATCAGCCGCAGCAGGAGAA TCATCTCCAGCTCTATCTGCAGCAGCAGCTCGATGAACAGTGGCAGCAAC ATTTCCAACAGAAACTTGATCAGCAATTACAGCTACAAGAGGAGCAGGGG CAGCGTTACCAGCAGAGAAGGCAACAAGCAGAGCAAACAGAGGCGCAGTA CCACCGAGACATTCCCCCCCCGTTCTCTGGCGGCGCGGACCAAGGCTTTC TCCCCTTCGTCCCCGTACCGAAAAAGCGGCGCTCGCTCTCCCCTTCGGGC TTTTCGACCGCCGGGCCCTCCCTGAGCTCCGGAGCTTCTCATTTAGGACT GCAGGTGGACGCGGGCGTGACGGCCACCGCATCCTCAGGCCGCTTCAACA CGGACGACCTTTCCCCCTACTGCCACTACCGACCCTCTTCCTCCCTGGCC GCGAACTCGTCCTACCTGGAGAGCTTCCTCGAAGGCAGCCTCACGCCGCA ATACCACCAGAGCACACGCGACCCCGTGCACAACCCCGCCCCTTTCCTGG CCCCCCTGCCCCCCCACCCCACCCAGGACGACCCCAGCCAGGGTCTAGCT CCAGACGGCCCTCGTCGAAGAGATGCCGATTGCCTCGCTCTATATATTTT GGCGGCTGTCCCGCCACTGGGGGGGACCTCTCTGTTGTCTCTATGGACGA TGCTCCAGGCCCCTCCCTACTGCGTGCTCTCGTCATGTATCCCATGA back to topprotein sequence of rna5202 >rna5202-protein ID=rna5202-protein|Name=rna5202|organism=Nannochloropsis gaditana|type=polypeptide|length=316bp MQQKNKGHTRCGRWSLLSVAGLVGFTVALGMHHTHAFVAPIAPHGLPENL RVVRHRHQLGSQTCQLVQTPRFWSPFTGQLRGKSGSSRLHARISEKPGDK QDREEGGEQGLPKVLEEGLPKLTRQQEEAVDLSMGVIPPEQEPLSGEAWT AEVEKRLQEMYEKGTYDPTPVNLTPKELANQQWVDDFLNKEERPIRFTPE YWFGTWTRGDIKFSSAGRGLKSFGFALVGIGLVTLMFLLEDELVNPAFDD YRQWDGNDFFHFGEDLGAWVTAIPARTSDYLSHFNWVEWSARVAARAGAA PRWQNQLLGLPAIPPQ back to topmRNA from alignment at CM002465.1:410562..412035+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna5202 ID=rna5202|Name=rna5202|organism=Nannochloropsis gaditana|type=mRNA|length=1474bp|location=Sequence derived from alignment at CM002465.1:410562..412035+ (Nannochloropsis gaditana) GACCCCTGCCAATTATTAGACCCGTCCCACGGCCATAGATCCCACGTTAT
TTGTGTACTCACAAGGCGGTCTCCGCCCTCTTTCGATGCATCTATGCCTA
TTGACTTGCTCCTCATGTCGTTCACGGGGGTCGAACTCCGTTTCAAAACA
TTACCAGCAGACTCACAGGGTCGTGTCACATAGAGTAACGCGCTCTCAGC
CCGGTGGACTGCGTCTTACACGCTAATTGCCGTGTATAGGACGCCTCCAA
ATGCAACAAAAGAATAAAGGGCACACAAGATGCGGGAGGTGGTCATTGCT
TTCGGTGGCAGGCCTAGTAGGGTTCACCGTAGCCCTAGGAATGCACCACA
CGCACGCGTTCGTCGCGCCTATTGCACCCCATGGCCTTCCAGAGAATCTG
AGAGTGGTTCGGCACCGACACCAGCTTGGATCGCAGACATGTCAATTGGT
GCAGACGCCCCGATTCTGGTCCCCTTTCACAGGACAGCTGAGGGGCAAGA
GTGGTAGCAGTCGGTTGCACGCGCGCATTTCGGAGAAGCCAGGGGATAAG
CAAGatagagaggaaggcggggagcaaGGCTTGCCGAAGGTTCTAGAAGA
AGGTTTACCTAAGCTGACACGACAGcaagaagaggcggtggacctGTCAA
TGGGCGTGATACCTCCCGAGCAGGAGCCGCTTTCTGGCGAGGCCTGGAcg
gccgaggtggagaaacGGCTGCAGGAGATGTATGAGAAGGGCACGTACGA
CCCCACGCCCGTGAATCTGACGCCCAAAGAGCTGGCGAACCAGCAGTGGG
TGGACGACTTCCTGAACAAGGAAGAGCGACCCATCCGGTTCACGCCCGAG
TACTGGTTCGGCACCTGGACGCGGGGGGACATCAagttctcctccgccgg
ccgTGGCCTGAAATCCTTCGGCTTCGCGCTCGTGGGCATCGGGCTGGTCA
CGCTCATGTTCTTGCTCGAGGACGAGCTGGTCAACCCGGCGTTCGACGAC
TACCGGCAGTGGGACGGGAACGACTTCTTCCACTTCGGGGAGGACCTAGG
GGCCTGGGTAACCGCCATTCCCGCCCGGACCTCGGACTACCTCTCCCATT
TCAATTGGGTAGAGTGGAGCGCCCGCGTGGCCGCGCGTGCAGGCGCGGCG
CCCCGGTGGCAGAACCAGCTCTTGGGCCTCCCCGCGATCCCCCCCCAGTG
ATCACTTGAACCAGTGCCCCCCACTCCCGCATGTATCCTGAGACCGCCAT
CCAgagccccccctccctagccccttcctcccccggcgcaTTGCAGCCGG
CGGCGTTTCACATCCTGGCAGCATGTGGATTTAAAGAAGGACATCAAATT
GAAGAGACAGGAAGAATCAACGGCCGACAGCATGCGtgtccttcgcttcc
tttgTGGCGGTTATTTTATTTTGCATCGATCACTTGCATGGCCATCTGCA
CTCATGGACTCAATTCCAgccctc back to topCoding sequence (CDS) from alignment at CM002465.1:410562..412035+ >rna5202 ID=rna5202|Name=rna5202|organism=Nannochloropsis gaditana|type=CDS|length=951bp|location=Sequence derived from alignment at CM002465.1:410562..412035+ (Nannochloropsis gaditana) ATGCAACAAAAGAATAAAGGGCACACAAGATGCGGGAGGTGGTCATTGCT TTCGGTGGCAGGCCTAGTAGGGTTCACCGTAGCCCTAGGAATGCACCACA CGCACGCGTTCGTCGCGCCTATTGCACCCCATGGCCTTCCAGAGAATCTG AGAGTGGTTCGGCACCGACACCAGCTTGGATCGCAGACATGTCAATTGGT GCAGACGCCCCGATTCTGGTCCCCTTTCACAGGACAGCTGAGGGGCAAGA GTGGTAGCAGTCGGTTGCACGCGCGCATTTCGGAGAAGCCAGGGGATAAG CAAGatagagaggaaggcggggagcaaGGCTTGCCGAAGGTTCTAGAAGA AGGTTTACCTAAGCTGACACGACAGcaagaagaggcggtggacctGTCAA TGGGCGTGATACCTCCCGAGCAGGAGCCGCTTTCTGGCGAGGCCTGGAcg gccgaggtggagaaacGGCTGCAGGAGATGTATGAGAAGGGCACGTACGA CCCCACGCCCGTGAATCTGACGCCCAAAGAGCTGGCGAACCAGCAGTGGG TGGACGACTTCCTGAACAAGGAAGAGCGACCCATCCGGTTCACGCCCGAG TACTGGTTCGGCACCTGGACGCGGGGGGACATCAagttctcctccgccgg ccgTGGCCTGAAATCCTTCGGCTTCGCGCTCGTGGGCATCGGGCTGGTCA CGCTCATGTTCTTGCTCGAGGACGAGCTGGTCAACCCGGCGTTCGACGAC TACCGGCAGTGGGACGGGAACGACTTCTTCCACTTCGGGGAGGACCTAGG GGCCTGGGTAACCGCCATTCCCGCCCGGACCTCGGACTACCTCTCCCATT TCAATTGGGTAGAGTGGAGCGCCCGCGTGGCCGCGCGTGCAGGCGCGGCG CCCCGGTGGCAGAACCAGCTCTTGGGCCTCCCCGCGATCCCCCCCCAGTG A back to top
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