EWM25483.1, cds5190 (CDS) Nannochloropsis gaditana

Overview
NameEWM25483.1
Unique Namecds5190
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002465.1:410812..411762 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM25483.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100583g3.5693.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002465.1supercontigCM002465.1:410812..411762 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
[Close]
BLAST of EWM25483.1 vs. NCBI_GenBank
Match: gi|585107247|gb|EWM25483.1| (hypothetical protein Naga_100583g3 [Nannochloropsis gaditana])

HSP 1 Score: 651.358 bits (1679), Expect = 0.000e+0
Identity = 316/316 (100.00%), Postives = 316/316 (100.00%), Query Frame = 0 
Query:    1 MQQKNKGHTRCGRWSLLSVAGLVGFTVALGMHHTHAFVAPIAPHGLPENLRVVRHRHQLGSQTCQLVQTPRFWSPFTGQLRGKSGSSRLHARISEKPGDKQDREEGGEQGLPKVLEEGLPKLTRQQEEAVDLSMGVIPPEQEPLSGEAWTAEVEKRLQEMYEKGTYDPTPVNLTPKELANQQWVDDFLNKEERPIRFTPEYWFGTWTRGDIKFSSAGRGLKSFGFALVGIGLVTLMFLLEDELVNPAFDDYRQWDGNDFFHFGEDLGAWVTAIPARTSDYLSHFNWVEWSARVAARAGAAPRWQNQLLGLPAIPPQ 316
            MQQKNKGHTRCGRWSLLSVAGLVGFTVALGMHHTHAFVAPIAPHGLPENLRVVRHRHQLGSQTCQLVQTPRFWSPFTGQLRGKSGSSRLHARISEKPGDKQDREEGGEQGLPKVLEEGLPKLTRQQEEAVDLSMGVIPPEQEPLSGEAWTAEVEKRLQEMYEKGTYDPTPVNLTPKELANQQWVDDFLNKEERPIRFTPEYWFGTWTRGDIKFSSAGRGLKSFGFALVGIGLVTLMFLLEDELVNPAFDDYRQWDGNDFFHFGEDLGAWVTAIPARTSDYLSHFNWVEWSARVAARAGAAPRWQNQLLGLPAIPPQ
Sbjct:    1 MQQKNKGHTRCGRWSLLSVAGLVGFTVALGMHHTHAFVAPIAPHGLPENLRVVRHRHQLGSQTCQLVQTPRFWSPFTGQLRGKSGSSRLHARISEKPGDKQDREEGGEQGLPKVLEEGLPKLTRQQEEAVDLSMGVIPPEQEPLSGEAWTAEVEKRLQEMYEKGTYDPTPVNLTPKELANQQWVDDFLNKEERPIRFTPEYWFGTWTRGDIKFSSAGRGLKSFGFALVGIGLVTLMFLLEDELVNPAFDDYRQWDGNDFFHFGEDLGAWVTAIPARTSDYLSHFNWVEWSARVAARAGAAPRWQNQLLGLPAIPPQ 316
The following BLAST results are available for this feature:
BLAST of EWM25483.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585107247|gb|EWM25483.1|0.000e+0100.00hypothetical protein Naga_100583g3 [Nannochloropsi... [more]
back to top
Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna5202rna5202Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications