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Properties
| Property Name | Value |
|---|
| Product | 50s ribosomal protein l28 |
| Orig transcript id | gnl|cribi|Naga_100115g6.6578.mrna |
| Orig protein id | gnl|cribi|Naga_100115g6.6578 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002455.1 | supercontig | CM002455.1:1305690..1307348 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna519 ID=rna519|Name=rna519|organism=Nannochloropsis gaditana|type=mRNA|length=1377bp
CGGGCCCGGACTTTGCCTTCTCCGATTTTATTATTTTGTGAGCGCATATG
GAGTCATTTGCTGAGCACATGCTGTGAAATTGTGTCTTTATCCGGCTTCA
CACGAATACTGGAAGCTCTGACTGCCGGCGTGCTTCTTCGCCCGTCCCCG
GTGGACTGCTTCCACCCGCTCTTTTTCTTGCTCGATTTATGTTGAGAAGC
TCGCTCTATTTGTACCCTCGAAGCTCCCAGCGGTGAAGTCAATGATGGAT
TGGCGTAAATTGAATTCAAGCGCACCATTGTGTGCCGATCGTTTGCCAAC
CTCTGGTTTTAAGAAGCGCTTGGTATGCTCGAAACTCTCAATCTATGGAG
ACTGTGAGTCGAGTTTTTCTTCTCAAGCTCAGTCGAGCATTTTGCTTTGT
CCGTGCATCTTAAGTGCTCAGATTCTGGCCAATCAATTATCGTTGCTTGC
GAATTGACACAGGCGTCGCATCGAGGGCTTTGTGACACGTGAAAAAACGG
GCTGAAGGTCAGGACGCTTGTTCCAATGCTAACTATCTGTGATTTTCCAA
CACTCCTCAGCAGTAAACAGGGTCTCACACGTAAAAATACTTTTTCATCA
TGGTACGTCCGTGTTTCACAGATTTTTGCAATTATTTCTTTGCCGGTGAC
CAGTTCAGAGTCTTCCTTAAGGGCCCCGGCCCATGCTCTCAGCCGGTGTA
AGAATGCTTCGAAGGCTTTCGTACATCTTAGCACCATGGAATGTCCGGGG
CCTTGTTTCCCAGGTTTACTCAAAACACGTAGTACTGGGCCTGTTTCATT
TCTCGCACCGCACGTCAAGTGCTCTCTTGTAGCATCCCTTGTGCACTACG
CCTCGTCTCCATCCCGCCGACGCCTATATTGACATGACATCATGCCTAAA
ATGAATGCACCACTTAAGACTAAGCACTCCCTTAATATCTTGTAACTTGC
CAACAATCCCTCAGCCTGGTCGTGATGCCGGCAAGGCCAAGCCCCTGAAG
GCACCGAAGAAAGCCGCCAAAGAACTGACAGAGGAGGATCTGGCTTTCAA
AAACAAGCAGAAGGCAGAGGCTGCTGCCATGAAAAAAGCTGCAGAGGCGT
TGAAGGCAAAGAAAAAGTAAGGCAAGAAGAAGTGCACTCCCGCGATGCCA
TCCAGGCGGGTGAGGGGAAGAGGCGCACAGGCTGATTATGGACCTTGGGG
AATAGGGAATAGGAGGATGAAGATCTTCGTATCCATCAAAACATGATGCG
ACGAAATGACAATATTTTGCTCGCTTTTCCTTTGACCGCTATTTTGACCT
CTCTTGCGTTTCCATCCGTCGTGCTGATAATGGTCACCACGAACGTGGTC
TCACGACCTCGACTGCATGTTACGTTT back to topprotein sequence of rna519 >rna519-protein ID=rna519-protein|Name=rna519|organism=Nannochloropsis gaditana|type=polypeptide|length=132bp
MKAFSFLMVFLSVALAQAFLAPATFQVPRAMDALSPSPVAPARKSLMVMR
ERKCELLGKRANRQCRSVSFSHIRNKKTQGVNLHEKRVWWAEGSKFVRLR
LSTKGWRTVKKYGLNKAFAKFEVDLHQFQAQH back to topmRNA from alignment at CM002455.1:1305690..1307348- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna519 ID=rna519|Name=rna519|organism=Nannochloropsis gaditana|type=mRNA|length=1659bp|location=Sequence derived from alignment at CM002455.1:1305690..1307348- (Nannochloropsis gaditana)
AGTTGCGCGTTGGTTGCCACCGGGACCAAAACAGCAGTGGGAATGGGTGG
CAGAGAGCTCGTGTCGGTGATTAGCCATTGGGTCAATAAAACACTGTCGT
AGGCAAGGTTGGCCATTGGTTGTCGCTCACGTGTGGTTGGCTACTTGCTG
TCTCGGGCCAGCGTGGTCACTGCCCAAGGCTACGTCTTGTAAGCCCTCTA
GGCAATTTCATGCCATAAGAACTGTATTACATATCTTCTCATGGCTTGCA
CCCCACCTCCTCAAAACTAATCGAGCCAGTGGCATCTAATCACCAGTCTT
TTTCACATTGTCATCCATATTTCAAACAAAATAGTCATGAAGGCCTTTTC
GTTTTTGATGGTTTTCTTGAGCGTGGCGCTGGCACAAGCGTTTTTGGCAC
CAGCAACTTTTCAAGTGCCCCGTGCGATGGTAAGTGCGTTCGTGTTGTCA
AGCTGATTGGATGTCGAGAGAAGGATCATATTCGGTTGCTGGCTTTTGCG
TGGACGTGAGCACTTTCAAGATGGATTACATTGAACAGATTTTAGATGAC
GGTCTTGACGAGTTTGTTCGTACCTCTGGGGTTGCGTACCGCCGCCTGAC
ACCCTGACATCCTGCTGTCTTCAACTTATGAATCACGGAAACATTTTCCT
CGAACCGATCCGGATTGTCGTGAAGAGTTTTACCCTGCCAAGAGTTTCCT
CCTCCGGCTGGCTGTGGCCTGAAAAAACTGCTCACTTTTTTGCCTTGACT
TCTATCGCACAGGATGCACTTTCCCCATCTCCCGTGGCTCCTGCCCGTAA
ATCACTCATGGTGATGCGGGAACGAAAGTGCGAGCTTTTGGGCAAGCGCG
CGAACCGACAGTGCCGTTCTGTGTCCTTCTCCCACATCCGCAACAAGAAA
ACCCAAGGCGTCAACTTGCACGAAAAGCGGGTATGGTGGGCGGAAGGTAG
CAAGTTTGTCCGTCTCCGTCTGTCGACCAAGGGGTGGAGGACCGTCAAGA
AGTACGGATTGAACAAGGCCTTTGCCAAGTTTGAGGTGGATCTGCACCAA
TTCCAGGCACAGCATTGAGCTGAGCGCCAGGAAAGGTGGGTTGGGCTATA
CATAGAAAAGAAGGGATTGATACGTCTGAATACATGGACGCTTCGCATAC
GATCTGGATCCTTGTGACAGAAGCCGTGATGCTTTTCAAGGGCATTCGTG
ACGGGGGAGATGCGAAGAAGGGAGAGGGTGCAGAGATGGGTGGACGGTGG
GAGAAGAAGAGGGAGCGTGGACAGGTACCACATACGACATTACCCGTATT
GTTTAGATTGGCCTTCAGCTTTTCTTGAAAGCCGTCCACCAACCACATTT
TTTCAGTCTTCCAATCCTCTTCTGCCTTTGCGCATGTTGTTTCACGCCCA
TTGGACGCGTTGACGGCCTTGTTGATGCGTGCGTGACGATAGGGAGGAAG
ACGTTGGGCCTTGGGACCGTACCCCGCACAACTTCTCGTTTCCTCGACAC
ATGTGCGCGGGCACTCACGAGAGAAGGTAGGAAAGCTTTCTGGGCATGAA
AGAATTAATTCAGATCGATAAATCGATTTGCTCGTTGCGTTTATGGCGCG
GCATGGTGCTTTTAAGGCATCGCGATGAGGGTTACGCGCTGTAGCAGATT
TTTCTTTCC back to topCoding sequence (CDS) from alignment at CM002455.1:1305690..1307348- >rna519 ID=rna519|Name=rna519|organism=Nannochloropsis gaditana|type=CDS|length=798bp|location=Sequence derived from alignment at CM002455.1:1305690..1307348- (Nannochloropsis gaditana)
GATGCACTTTCCCCATCTCCCGTGGCTCCTGCCCGTAAATCACTCATGGT
GATGCGGGAACGAAAGTGCGAGCTTTTGGGCAAGCGCGCGAACCGACAGT
GCCGTTCTGTGTCCTTCTCCCACATCCGCAACAAGAAAACCCAAGGCGTC
AACTTGCACGAAAAGCGGGTATGGTGGGCGGAAGGTAGCAAGTTTGTCCG
TCTCCGTCTGTCGACCAAGGGGTGGAGGACCGTCAAGAAGTACGGATTGA
ACAAGGCCTTTGCCAAGTTTGAGGTGGATCTGCACCAATTCCAGGCACAG
CATTGAATGAAGGCCTTTTCGTTTTTGATGGTTTTCTTGAGCGTGGCGCT
GGCACAAGCGTTTTTGGCACCAGCAACTTTTCAAGTGCCCCGTGCGATGG
ATGCACTTTCCCCATCTCCCGTGGCTCCTGCCCGTAAATCACTCATGGTG
ATGCGGGAACGAAAGTGCGAGCTTTTGGGCAAGCGCGCGAACCGACAGTG
CCGTTCTGTGTCCTTCTCCCACATCCGCAACAAGAAAACCCAAGGCGTCA
ACTTGCACGAAAAGCGGGTATGGTGGGCGGAAGGTAGCAAGTTTGTCCGT
CTCCGTCTGTCGACCAAGGGGTGGAGGACCGTCAAGAAGTACGGATTGAA
CAAGGCCTTTGCCAAGTTTGAGGTGGATCTGCACCAATTCCAGGCACAGC
ATTGAATGAAGGCCTTTTCGTTTTTGATGGTTTTCTTGAGCGTGGCGCTG
GCACAAGCGTTTTTGGCACCAGCAACTTTTCAAGTGCCCCGTGCGATG back to top
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