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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100115g3.6582.mrna |
| Orig protein id | gnl|cribi|Naga_100115g3.6582 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002455.1 | supercontig | CM002455.1:1301498..1303034 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna517 ID=rna517|Name=rna517|organism=Nannochloropsis gaditana|type=mRNA|length=2834bp
GATGATCACTTTCTCAAGGAGAGGGTCTCTCACTGAGAAAGGAAGTGCAT
ATGTTGCCGTTGGAAGGATTGCTTCGGTTGCTTTGGTGGGACTGGGATTC
ACGCCTTTGCATCTCCTTTACCTTCATCTCCGTGGTAAAGCGCGGCGTCG
AAATTTGTTTGCGTGTCTCTTGGAGAATGTACTCGCTTACTTTCTATTGG
TATCAAGCGTGCGGCACGTACTGCATGCCCCACCCGCCAAAACTCGACAG
CAGCAGCGGCGACAGGTTCTGGGGATCATATCGGCAGCAATCCTTGTCTT
TGCACATGCCTTCATTGTAGCCGCTCAAGTGACTGCGCTGGCCTTAATGG
GCTCGCGAATGAATGGAGACTTCATCTACAACCTGGTGTACGCAGTCAAG
ACATGTACGTGGCGGGAAACGGACGCCAAGTATTTTTTCCCTTTGATGCT
GTCTGCCACGCTAGCAATCGACATGGTATGGTTGTGGTACGCCCTCCTCA
CACCACGTAGTGTTGAGTGTCGTACCGAAAAAAATGATGATACTGCAGCG
GACAAGGTCCAGGAAAAGATATCTGCCAGGCAAAGCAGCACTGTCAACCG
GTGGTACCTGGCCTTGAGTATAATAGGGCTATTGCGGGGCGTGGTATTTT
GGCGGGGGTACTCGCCCGTGGCAAACACCCTTTACTCGCTTGTACAATAC
AGTCGAATGAAAGGGCCGTCGAGTCTGAAGCGCAGCCAAAAATATGGGAG
TGGTATACCGCGCAAAGCTCACAAGATATACAAGTACGATTACGCCTCTC
TCCCCGAACGGGTCGCTGGGAATGCCGCGGAGGCATTGGGAAGAAGTACC
AATGAGGAGGCACAGATCCAGAAGCAACGGAAGAAAACCAACGTAATTCT
GTTGCTGAGCGAGAGCTTCGGCAACTCCTTGCTCAAAACAGAAGAGGGCT
TAGAGGCTTTCCCTTTCTATGAAAATGTTGTGCAGCGGGATCCTGATATT
TATGATTTCACAAATAATCGTGCAGTTTCGGGAAACACTCTTACAGCGGC
CTCAGCCGCCTTGGTTGGGTCCTATGTTGCCGCTCCTGATCTGCACCCCG
ACACGTGGACCTTCTTTGATCTGCCAAACCTGTTCACGCTGGGCAAGGCC
CTAGGCTACCGCCTTGTCCTCTTTATGCCATACGACCACGAGGATTGGTT
TCCTTTCACGGGGATATACGAGGACCGTTTCGATAAGATTGTGAGCAGGA
GCACATTGGGGGAGAGGGCGGTCAATGACATGGGAATGGATGACCGCCTG
GTGACGGCCGAGGTCCTTAAGTTTCTGGAGGAGGAGGGGGCCAAGCAAAG
GCGACACCGAGAGAAAGAACTGTTGAGAGAGCAGCGGGCATCCGAATGCC
AGGAGACGTATGGAGAGTGGCCGCACCATGACAGTCAGGTCGGCAAGGGG
GATGGCCCGCAGGAGGGGGAGCGGGAGCAGCAACACCATCAACGTAATGA
ACAAGAGGTGGGGTACACGGGCTCGGAATACCACGTCGAGAGTGAGCACG
ATCAGGAGAAGGGGGGCGTAGGGGAAGTGAGACGGCATCATGGCACCGAG
GCAAGCGAAAATGACGACGAAGAGGCTGAAAAATTCATACTCGTGGTGTT
TTGGAACCATCTGCACACACCTTTCCTTGTCAACGACGAAGCCAATCCAA
TAAATCAGACACTGCTGGACCTTACCCGTGCTTCCAATGCAAGGAAACAA
GATGAAACCACTACAATTGACGAATCCTCCGAGAAAAGGGCAGCAGCGTC
AGCCCCACCAAAGGCTCGTCCGAAGAAAACATTGGTGCCTCCCGAAGTAC
GAAGCTCCTCCTCTCTGGACGCACTGACTCGCCTGGGTATGAAGGAAGAC
CGGGCGGTCAGTGCCATGCAGATCGGGAACAAGATGATGCACGACGTGTA
CGACACCTTGCAATCCTCTGGCTTGCTGGAAAATACCCTCATTTCTTTCC
AGTCCGACCACGGGGAAACTGCCGGGCCGGTGGTGCGGAAACGTCTGGCA
GACCCGGACTCTCTCTATTTAGCCACGCCCCTCTGGATGCACATCCCTCC
CACATTGCTCACAGACACTCAACGTGCCACCCTCCGTGCCAACGGGGACA
GGTTAACGTCGAACATGGACGTGATGCCGACTTTTGTGGAGATCCTGGGT
TGGGAATCGGCCGACAGCATGTTCGACGGCGTACCGAGCATCTTCAAACA
CGGGGTCTCCTTGCTCCGCCCTGTCGAACACGATCGGGTCACCTCCGGGT
GGCAAGGCCCACCGTTTGTCGATTCCTGCGATTGGGCCCACGGCTTTGTC
TTCAATGCCTCGCATACCCTTATCTTGAGGGTACCCGACAATGACGCCGT
CTTGGAGGCATTAGACGAAGAGGATGGGACCTGGACTACAGTGAAACAGC
GCGTGCCTCTGAAGGACTTGCCCGGGGAAGAGCTGGCCTGGTGGATGCAA
GAGCTTCAGACGAACCATGCGGATATGATGAAGACGATGAAGGAGTGTTT
CTGGGATTATTTGTGGGAGAGTTGAGCTCGAACATCTAGTGCGTTTAGTT
AGTGGTAGCGGTATTCTCTAACGAGTGTTCAGGGACGAACACTTTTTTTT
TTTTCGTTTGTATATTTAGATGTATCATAGCAATTGTTGGGTTGCTAAAT
AGCGTTTCGATGCGATGTCATCGTATGTTGAAGCCTTATCACCTCCCAGA
GGCATTTGAGAAATGCAATTTGAAATTTGTAAGCATGGCTGCGTAAATGA
CAAAGCAAAACAAAAAATCGGCTGCTTGGACTTG back to topprotein sequence of rna517 >rna517-protein ID=rna517-protein|Name=rna517|organism=Nannochloropsis gaditana|type=polypeptide|length=182bp
MYSMKSIGLSLFLAGMALFSSTTFVDAQVIAQAMVKPLAVRPGGRITATL
NFVVSSFASNATDPAIAVGFATLGAQELAALNNKNRTTKGKASMDPLANE
LVIRGSRISPNKWRPKLRTNESEWYSVAWGIPKEGTLLKKVYKVVCKIRV
GKGVERNTVRKVSVTLIAGSYIFEESLDVYIK back to topmRNA from alignment at CM002455.1:1301498..1303034- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna517 ID=rna517|Name=rna517|organism=Nannochloropsis gaditana|type=mRNA|length=1537bp|location=Sequence derived from alignment at CM002455.1:1301498..1303034- (Nannochloropsis gaditana)
CTTCTTTGTAGCGCGAGGTTTTTGTGTCGCACTCTGGGAGGAACAGTCAG
ACGCACGTAATCTTTCCGTTGGCCCATGCACGGTTTCTATCCTGATTAGA
CGATCACGTGCTAAGTTCTTTCCCGATATATCTCTCACAATCATGTATGT
TATAATAATGTTGTAAACTGTCGTAATTTGGAGCATGCATGAGAGTAGCT
ACCATCGACACAATGCAACTCATTACGCATTAGTTTTAGTTGAGTAAACT
ACACTATAACTGCATGAAATACGTAAAGTAGGGAATTAATGACACAAGCT
CAATCTTTAAACCTTAAGGACAGGATTTGTCACTATTACAATGTATTCTA
TGAAGAGCATCGGTTTATCTCTGTTTTTGGCCGGAATGGCGCTTTTCTCT
TCGACGGTAAGTCTGGCCGAACCGCCAACAGTCCATCGGTTTCGAACGAA
TGTCGATTCTCAATGCTCTTGCATCTCCCTTTCCCAGACTTTTGTCGATG
CTCAAGTGATTGCTCAAGCCATGGTGAAGCCACTTGCTGTGAGGCCCGGT
GGCAGGATCACTGCCACCCTTAACTTCGTCGTTTCAAGCTTTGCGTCCAA
CGCCACGGATCCGGCCATAGCTGTGGGGGTAGGTTTAAAAGGGCGGAAGC
ACATGTCGGCAGGCTGAAACCAGGAGGGCCATTTCGACGCTGGTGACCAC
GAAGACTGTCTGATGTCTTGAAAACTTACCTGCTCGCTTTTCCTTTCATC
CTCCTGCATAGTTTGCAACGCTTGGAGCACAGGAGCTCGCGGCACTGAAC
AACAAAAACCGCACCACGAAGGGCAAGGCGAGCATGGATCCGCTTGCTAA
TGAATTGGTCATCAGAGGATCCAGAATTTCCCCCAATAAATGGAGGCCCA
AGTAAGAAGAAGCGGAATCAGGGAGGGGAGTAGGTACAGGAAAGGGAATC
ATAGCGAGACTATTTGTACGCCTGATTGCTCACATAGCAAGCTAAGATAT
ATGTTTTGACTCACACCATAGGTTGCGCACGAATGAGAGCGAATGGTACT
CGGTGGCGTGGGGGATTCCGAAAGAAGGCACGTTGTTGAAGAAGGTTTAC
AAAGTTGTTTGCAAAATCCGCGTCGGTAAAGGCGTGGAAAGAAATACGGT
CAGGAAAGTATCTGTGACTTTGATTGCCGGTAGCTACATTTTCGAAGAGA
GCCTGGATGTTTACATCAAGTAAATCATCCTATCGGCGGTATATGTCTTG
AAAGCAGCACATGAGTTGTCCGATTAACGAAGTCCTGTGGGATTTTAGTT
TGTCTAAACTCCCCGAGAATACTGTGATTCAATCGAACAACAGTTTGGTT
TCACTTAAATCAACGGACTGGAAATTATGAAACGTGAAAGCACGGCGAGG
TGAAAGAAAAAATGCAAGAGGGCATGAAGGGGTATCGCTGCTCGAATTTT
TTTAAAACCGCAAGTCGTCCCTCTGTCCACAAAGTTCGGACCAGAATATC
ATCTTAGTTCGGTGGATTCTATTACTCTATTTATGCC back to topCoding sequence (CDS) from alignment at CM002455.1:1301498..1303034- >rna517 ID=rna517|Name=rna517|organism=Nannochloropsis gaditana|type=CDS|length=2196bp|location=Sequence derived from alignment at CM002455.1:1301498..1303034- (Nannochloropsis gaditana)
GTTGCGCACGAATGAGAGCGAATGGTACTCGGTGGCGTGGGGGATTCCGA
AAGAAGGCACGTTGTTGAAGAAGGTTTACAAAGTTGTTTGCAAAATCCGC
GTCGGTAAAGGCGTGGAAAGAAATACGGTCAGGAAAGTATCTGTGACTTT
GATTGCCGGTAGCTACATTTTCGAAGAGAGCCTGGATGTTTACATCAAGT
AATTTGCAACGCTTGGAGCACAGGAGCTCGCGGCACTGAACAACAAAAAC
CGCACCACGAAGGGCAAGGCGAGCATGGATCCGCTTGCTAATGAATTGGT
CATCAGAGGATCCAGAATTTCCCCCAATAAATGGAGGCCCAAACTTTTGT
CGATGCTCAAGTGATTGCTCAAGCCATGGTGAAGCCACTTGCTGTGAGGC
CCGGTGGCAGGATCACTGCCACCCTTAACTTCGTCGTTTCAAGCTTTGCG
TCCAACGCCACGGATCCGGCCATAGCTGTGGGGATGTATTCTATGAAGAG
CATCGGTTTATCTCTGTTTTTGGCCGGAATGGCGCTTTTCTCTTCGACGG
TTGCGCACGAATGAGAGCGAATGGTACTCGGTGGCGTGGGGGATTCCGAA
AGAAGGCACGTTGTTGAAGAAGGTTTACAAAGTTGTTTGCAAAATCCGCG
TCGGTAAAGGCGTGGAAAGAAATACGGTCAGGAAAGTATCTGTGACTTTG
ATTGCCGGTAGCTACATTTTCGAAGAGAGCCTGGATGTTTACATCAAGTA
ATTTGCAACGCTTGGAGCACAGGAGCTCGCGGCACTGAACAACAAAAACC
GCACCACGAAGGGCAAGGCGAGCATGGATCCGCTTGCTAATGAATTGGTC
ATCAGAGGATCCAGAATTTCCCCCAATAAATGGAGGCCCAAACTTTTGTC
GATGCTCAAGTGATTGCTCAAGCCATGGTGAAGCCACTTGCTGTGAGGCC
CGGTGGCAGGATCACTGCCACCCTTAACTTCGTCGTTTCAAGCTTTGCGT
CCAACGCCACGGATCCGGCCATAGCTGTGGGGATGTATTCTATGAAGAGC
ATCGGTTTATCTCTGTTTTTGGCCGGAATGGCGCTTTTCTCTTCGACGGT
TGCGCACGAATGAGAGCGAATGGTACTCGGTGGCGTGGGGGATTCCGAAA
GAAGGCACGTTGTTGAAGAAGGTTTACAAAGTTGTTTGCAAAATCCGCGT
CGGTAAAGGCGTGGAAAGAAATACGGTCAGGAAAGTATCTGTGACTTTGA
TTGCCGGTAGCTACATTTTCGAAGAGAGCCTGGATGTTTACATCAAGTAA
TTTGCAACGCTTGGAGCACAGGAGCTCGCGGCACTGAACAACAAAAACCG
CACCACGAAGGGCAAGGCGAGCATGGATCCGCTTGCTAATGAATTGGTCA
TCAGAGGATCCAGAATTTCCCCCAATAAATGGAGGCCCAAACTTTTGTCG
ATGCTCAAGTGATTGCTCAAGCCATGGTGAAGCCACTTGCTGTGAGGCCC
GGTGGCAGGATCACTGCCACCCTTAACTTCGTCGTTTCAAGCTTTGCGTC
CAACGCCACGGATCCGGCCATAGCTGTGGGGATGTATTCTATGAAGAGCA
TCGGTTTATCTCTGTTTTTGGCCGGAATGGCGCTTTTCTCTTCGACGGTT
GCGCACGAATGAGAGCGAATGGTACTCGGTGGCGTGGGGGATTCCGAAAG
AAGGCACGTTGTTGAAGAAGGTTTACAAAGTTGTTTGCAAAATCCGCGTC
GGTAAAGGCGTGGAAAGAAATACGGTCAGGAAAGTATCTGTGACTTTGAT
TGCCGGTAGCTACATTTTCGAAGAGAGCCTGGATGTTTACATCAAGTAAT
TTGCAACGCTTGGAGCACAGGAGCTCGCGGCACTGAACAACAAAAACCGC
ACCACGAAGGGCAAGGCGAGCATGGATCCGCTTGCTAATGAATTGGTCAT
CAGAGGATCCAGAATTTCCCCCAATAAATGGAGGCCCAAACTTTTGTCGA
TGCTCAAGTGATTGCTCAAGCCATGGTGAAGCCACTTGCTGTGAGGCCCG
GTGGCAGGATCACTGCCACCCTTAACTTCGTCGTTTCAAGCTTTGCGTCC
AACGCCACGGATCCGGCCATAGCTGTGGGGATGTATTCTATGAAGAGCAT
CGGTTTATCTCTGTTTTTGGCCGGAATGGCGCTTTTCTCTTCGACG back to top
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