EWM30157.1, cds517 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM30157.1 vs. NCBI_GenBank
Match: gi|585112813|gb|EWM30157.1| (hypothetical protein Naga_100115g3 [Nannochloropsis gaditana]) HSP 1 Score: 369.392 bits (947), Expect = 1.856e-129 Identity = 182/182 (100.00%), Postives = 182/182 (100.00%), Query Frame = 0
Query: 1 MYSMKSIGLSLFLAGMALFSSTTFVDAQVIAQAMVKPLAVRPGGRITATLNFVVSSFASNATDPAIAVGFATLGAQELAALNNKNRTTKGKASMDPLANELVIRGSRISPNKWRPKLRTNESEWYSVAWGIPKEGTLLKKVYKVVCKIRVGKGVERNTVRKVSVTLIAGSYIFEESLDVYIK 182
MYSMKSIGLSLFLAGMALFSSTTFVDAQVIAQAMVKPLAVRPGGRITATLNFVVSSFASNATDPAIAVGFATLGAQELAALNNKNRTTKGKASMDPLANELVIRGSRISPNKWRPKLRTNESEWYSVAWGIPKEGTLLKKVYKVVCKIRVGKGVERNTVRKVSVTLIAGSYIFEESLDVYIK
Sbjct: 1 MYSMKSIGLSLFLAGMALFSSTTFVDAQVIAQAMVKPLAVRPGGRITATLNFVVSSFASNATDPAIAVGFATLGAQELAALNNKNRTTKGKASMDPLANELVIRGSRISPNKWRPKLRTNESEWYSVAWGIPKEGTLLKKVYKVVCKIRVGKGVERNTVRKVSVTLIAGSYIFEESLDVYIK 182
BLAST of EWM30157.1 vs. NCBI_GenBank
Match: gi|553183816|ref|XP_005853972.1| (hypothetical protein NGA_0434301 [Nannochloropsis gaditana CCMP526] >gi|422295089|gb|EKU22388.1| hypothetical protein NGA_0434301 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 83.1889 bits (204), Expect = 9.248e-17 Identity = 57/178 (32.02%), Postives = 91/178 (51.12%), Query Frame = 0
Query: 16 MALFSSTTFVDAQVIAQA---------MVKPLAVRPGGRITATLNFVVSSFASNATDPAIAVGFATLGAQELAALNNKNRTTKGKASMDPLANELVIRGSRISPNKWRPKLRTNESEWYSVAWGIPKEGTLLKKVYKVVCKIRVGKGVERNTV--RKVSVTLIAGSYIFEESLDVYIK 182
M +FSS A +++ A VK L+V+ G + T T +F++S +N T+ + L ++ L++KN T K K S ++ +R +RISPN WRPK+ N + + +P G +L K YKV KIR+GKG+ T ++ V L+ G +I E VY++
Sbjct: 1 MKVFSSLLVAVATLLSNAAAQEYTGSVCVKSLSVKAGRQATITTSFLISEVPNNVTEVLYGITVEPL----VSPLSSKNHTAKNKTSKFAGDVDVTLRKTRISPNTWRPKIFANGTGTGTSFLPMPLNGLVLSKQYKVTSKIRIGKGIPSGTYVPFQIFVDLVGGDFITREEGQVYVR 174
BLAST of EWM30157.1 vs. NCBI_GenBank
Match: gi|585103543|gb|EWM22885.1| (hypothetical protein Naga_100160g3 [Nannochloropsis gaditana]) HSP 1 Score: 75.485 bits (184), Expect = 1.473e-13 Identity = 56/181 (30.94%), Postives = 87/181 (48.07%), Query Frame = 0
Query: 13 LAGMALFSSTTFVDAQVIAQA---------MVKPLAVRPGGRITATLNFVVSSFASNATDPAIAVGFATLGAQELAALNNKNRTTKGKASMDPLANELVIRGSRISPNKWRPKLRTNESEWYSVAWGIPKEGTLLKKVYKVVCKIRVGKGVERNTVRK--VSVTLIAGSYIFEESLDVYIK 182
A M +FSS A +++ A VK L+V+ G + T T +F++S T+ + L + +L+ KN T K K S ++ +R +RISPN WRPK N + + +P +G +L K YK+ KIR+GKG+ T V V L+ G I E +Y++
Sbjct: 18 FAIMKVFSSLLVAVATLLSNAAAQEYTGSVCVKSLSVKAGRQATITTSFLISELPDTVTEAFYGITVEPL----VNSLSWKNHTAKNKTSKFAGDVDVTLRKTRISPNTWRPKTFANGTGTGTSFLPLPLDGLVLSKQYKITSKIRIGKGIPSGTYVPFLVGVELVGGDLIIMEEGYIYVR 194
BLAST of EWM30157.1 vs. NCBI_GenBank
Match: gi|585111994|gb|EWM29458.1| (hypothetical protein Naga_100083g24 [Nannochloropsis gaditana]) HSP 1 Score: 70.4774 bits (171), Expect = 9.819e-12 Identity = 53/172 (30.81%), Postives = 79/172 (45.93%), Query Frame = 0
Query: 24 FVDAQVIAQAMVKPLAVRPGGRITATLNFVVS----------SFASNATDPAIAVGFATLGAQELAALNNKNRTTKGKASMDPLANELVIR--GSRISPNKWRPKLRTNESEWYSVAWGIPKEGTLLKKVYKVVCKIRVGKGVERNTVRKVSVTLIAGSY-IFEESLDVYIK 182
F D I + VKP++V+ GGR+T T +F+ +FA A +L L+NKN+T N +R SRI PN WRPKLR+N + + IP G + + YK++ K R+GK +V V G + + +E LDVY++
Sbjct: 27 FPDFDAIGHSTVKPISVKAGGRVTLTTSFLFLETRRRQLRELAFADEILYWATPNEADIPAYGDLEELSNKNKTKTSHPKSSKHGNSTDVRLVRSRIMPNTWRPKLRSNITGSTNFM-SIPTTGLVALEDYKIINKFRIGKRYPSGSVITFYVYAEYGGFNLLQEFLDVYVR 197
BLAST of EWM30157.1 vs. NCBI_GenBank
Match: gi|585102369|gb|EWM21985.1| (hypothetical protein Naga_100745g2 [Nannochloropsis gaditana]) HSP 1 Score: 64.6994 bits (156), Expect = 4.863e-9 Identity = 44/136 (32.35%), Postives = 66/136 (48.53%), Query Frame = 0
Query: 28 QVIAQAMVKPLAVRPGGRITATLNFVVSSFASNATDPAIAVGFATLGAQELAALNNKNRTTKGKASMDPLANELVIRGSRISPNKWRPKLRTNESEWYS-----VAWGIPKEGTLLKKVYKVVCKIRVGKGVERNT 158
+++ Q + L V PGG +T + +F+ + ++ +G QE +A +NRT K A EL + S + PN WRPK R YS V W +P +G +LKK YK+ K+RV +GV T
Sbjct: 201 EIVTQGFLDSLVVSPGGPLTVSSDFIFVERPESDVFVSLTIG------QEASASGFRNRTQKAIG-----ARELTFKRSTLRPNTWRPKPR------YSIVGNEVVWQLPFDGFVLKKTYKIKWKLRVDRGVTSGT 319
BLAST of EWM30157.1 vs. NCBI_GenBank
Match: gi|553184967|ref|XP_005854180.1| (hypothetical protein NGA_0188501 [Nannochloropsis gaditana CCMP526] >gi|553192556|ref|XP_005855596.1| hypothetical protein NGA_0188502 [Nannochloropsis gaditana CCMP526] >gi|422293459|gb|EKU20759.1| hypothetical protein NGA_0188502 [Nannochloropsis gaditana CCMP526] >gi|422294881|gb|EKU22181.1| hypothetical protein NGA_0188501 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 56.225 bits (134), Expect = 5.086e-7 Identity = 38/120 (31.67%), Postives = 62/120 (51.67%), Query Frame = 0
Query: 67 AVGFATLGAQELAALNNKNRTTKGKASMDPLANELVIRGSRISPNKWRPKLRTN---ESEWYSVAWGIPKEGTLLKKVYKVVCKIRVGKGVERNTVRKVSVTL-IAGSYIFEESLDVYIK 182
AV F +L +Q + + + + G ++ ++ + SRI PN WRPKLR+N + + SV P G ++ K YK++ K R+GK TV V + GS + +E DVY++
Sbjct: 23 AVSFVSLLSQMKSCIGHPKSSKHGNST------DVRLVRSRIIPNTWRPKLRSNITGSTNFMSV----PTTGLVVLKDYKIINKFRIGKRYPSGTVISFYVFVDYGGSPLLDEVFDVYVR 132 The following BLAST results are available for this feature:
BLAST of EWM30157.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 6
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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