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Properties
| Property Name | Value |
|---|
| Product | anaphase-promoting complex subunit 6 |
| Orig transcript id | gnl|cribi|Naga_100032g15.263.mrna |
| Orig protein id | gnl|cribi|Naga_100032g15.263 |
| Gene | APC6-cdc16 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002465.1 | supercontig | CM002465.1:298406..301406 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna5162 ID=rna5162|Name=rna5162|organism=Nannochloropsis gaditana|type=mRNA|length=891bp
ATGTCCGAGTCCCTGGCAAATGCCGACCGGCGGGAGCGCCTGCGGAAGCT
TGCCTTGGAGACCATCGACCTAAACAAGGACCCATACTTTATGCGAAACC
ACCTAGGCTCCTACGAGTGCAAGCTCTGCCTAACCCTGCACAACAACGAG
GGGAACTACCTGGCCCATACGCAGGGGAAACGCCACCAGGAAAACTTGGC
ACGGCGGGCGGCGCGGGAAGCGAAAGAGCAGCAGTACCGGCCCAACAAGC
CTACCATGGTGGCGGCCCGACGGATGATGAAAATCGGCCGTCCAGGGTAC
AAGGTGACCAAAGCTCGGGACCTGAGCACGCGGCAGCGGTCCTTGATCTT
CGAGATCGATTACCCGCAGGCGGAGGAGGACGTGCAACCGCGGCACCGCT
TCATGTCTGCCTTCGAACAGCGGGTGGAGAGCACCAAGGAGCGGGAGTGG
CAGTACCTATTGTTCGCCTGTGAACCCTACGAGACGATCGGGTTCAAGAT
TCCGAACGTGGAGATCGATAAGGGAGAAGGGAGGTTTCTCTCTCAGTGGG
ACCCGAAGGCTCGCAAGTTCTTGCTGCAATTGTATTTCCGAGAGAGAGGC
GAGGGAGAGGCGGGAAGAGGGGCAAGCGGGGAAGGAGGGAGGGGCACACC
CATGCCGGTGGCGTCGCCCCAGAATGGCAGCTCAAATTACCAGCAAGGCT
TCGGACAGGAGGGGCGGATGCAATTCGAGGAGAGACGGACACAGCTGCCT
CCCCCCCCTCCACCGCAGCATTACCAACCTCAACAGAGCTTGGGGTCCTT
TGGACAGCGGCATGGCCACGCTGCTGGCTACGGCTATGGGGGAGGACCTC
CGCCCCCACCTCCTCCTCCTCCGCGGCACGGTGGGTACTGA back to topprotein sequence of rna5162 >rna5162-protein ID=rna5162-protein|Name=rna5162|organism=Nannochloropsis gaditana|type=polypeptide|length=810bp
MFTTATPASALAYTTTVTRNHTSETKGAVAMAMKEAAFSSSYPDQSLRAR
ERHKDKISKKLRQLAQDALSKRLPGRACFYADKLVRLTAGRLPEDVVLLG
RAHYQARANRKAVHVLEKYGLLAIKDAQRPLTRQEQHALFTAAAGSVPAE
IDTAGGGQSLKGSRKDASVSNVHTTARSTLEAYLLAAQCLGASDPQEECL
HLLDQILPCWEDEEEDAEGEGDRGERRQEESPCERQSRHLRNVRAAVVAA
GRQNVADVAESSKSGSRGDNPRKKGSWRAETWRQAEMLRDGKGEPSSRSL
RPTEQAQAVLTTIAALCFLRAQIFAGQDNRERAVAWCRHALEVDVYCVEA
LEFLADRKLLSQEEEQRLLARELAFDPGSEEEGEEDAAGTEQVVGDDWLR
LMYATRLLCFSDGVLSAEEQHQTIHRAFAGLEALGFGRDAATLTAQAALA
YYYQHDLAGAHRLCQQIRTQDPFFDKCLPLYLASLAELRLKTELYYAAHR
LVDTQPRSAVAWFGVGCYYVCIHKNETAQRYFHKAAKLDHTFVPAWIGFG
NAFAAQDESDQAMAAYRTAARLFPSAHLPLLYTGMEYLRTNNLSLALHFV
REAHRLNPMDALVHNEWGVILYRRGHFREAAARFEKVLGLASASNKACTL
VRWEATMVNLAHCCRKTGRFREAIAWYERALGLCTQKSGTYVALAFTHHL
CGDLDRAIEYYHRGLGLKSDDAFASAMLTQALQDAVLGVETEEGMEGDRL
GDWSPARASLIMSVPLPSPLAISVAKGTERVGRRSSVGSEIFNAMDEDLG
MEEDSVDLSE back to topmRNA from alignment at CM002465.1:298406..301406+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna5162 ID=rna5162|Name=rna5162|organism=Nannochloropsis gaditana|type=mRNA|length=3001bp|location=Sequence derived from alignment at CM002465.1:298406..301406+ (Nannochloropsis gaditana)
TCACTGATATTATTCCGGCCTTCCTCTCGAACACATGCAGGGTCACTCCA
GAGGATTTCTCAATTTACGGGATTTGGGAGAAATACTCGCTTTTTCGGAC
GAGTATAATTATTTTACCTCCAGCCCCAGCATTGACATTGAGAACGTCGC
GGACTTGTGTGCCCTACGGTACCTGCTTTTTTCTGTtccgggaggcgggg
agggcagaaatACGTGGAGAGTACCGTAACAAGCCTGAAACACGGGCGTG
GCAACACTGGTGGTCAAAGATAGATTGAAGGTGTGGAAACTATGGAGTTc
aactccctccccgggTCACCTGCTCGACAAACGAAtaacgggggggggga
gcagacgaggcagaggcggagggacggTTCGGCAACACCAGTCTTACTCC
TGGTTTTCAGCGCATGTTCACAACCGCCACTCCTGCTTCAGCCTTGGCGT
ATACAACGACCGTCACGCGGAATCATACCAGCGAGACAAAAGGTGCAGTG
GCGATGGCCATGAAGGAGGCagctttctcgtcctcctacCCCGACCAAAG
TCTCCGAGCACGTGAAAGACACAAAGACAAGATCTCAAAAAAGCTTCGGC
AGCTTGCCCAAGACGCCTTAAGCAAACGTTTGCCGGGCCGTGCGTGTTTT
TACGCCGACAAACTAGTCCGCCTCACCGcaggccgcctccccgaggACGT
GGTCTTGCTCGGCCGGGCCCATTACCAGGCGCGGGCGAACCGGAAGGCCG
TGCATGTCTTGGAAAAATACGGCTTGTTGGCCATCAAGGATGCGCAGAGA
CCCTTGACTCGGCAGGAGCAACACGCCTTGTTCACAGCCGCGGCTGGTTC
TGTCCCTGCGGAGATAGATACGGCTGGCGGTGGTCAAAGCCTCAAGGGCA
GCAGGAAGGACGCGTCCGTCAGCAATGTACATACCACAGCAAGGAGCACA
TTAGAGGCGTATCTCCTTGCTGCGCAATGTTTGGGAGCCTCCGATCCACA
GGAGGAATGCTTGCACCTCCTCGATCAGATTTTGCCGTgttgggaggacg
aggaggaggatgcggaaggggaaggagataggggggagagaaggcaggag
gagtcGCCGTGCGAACGGCAGTCAAGACATTTGCGGAACGTTCGTGCAGC
TGTTGTGGCGGCGGGGCGTCAAAACGTCGCCGACGTGGCAGAAAGCTCCA
AGTCGGGTTCCCGGGGGGACAATCCCAGAAAGAAGGGCTCTTGGCGCGCG
GAGACGTGGCGGCAAGCGGAGATGCTGAGAGACGGTAAAGGAGAGCCAAG
CTCCCGCTCGTTACGCCCGACAGAGCAGGCACAAGCAGTGCTCACCACGA
TCGCGGCCCTGTGTTTCTTGCGCGCTCAAATTTTCGCAGGGCAGGACAAT
AGGGAGAGGGCTGTGGCCTGGTGCCGGCATGCgttggaggtggacgtgta
ctgcgtggaggcgttggagtTCTTGGCCGATCGGAAACTTTTgtcgcagg
aggaagaacagcGGTTGCTGGCGCGGGAGTTGGCCTTCGACCccgggtcg
gaggaggaaggggaggaggacgctgcAGGCACAgagcaggtggtgggaga
TGACTGGCTCCGACTCATGTATGCGACTCGCCTCCTATGTTTCTCGGACG
GCGTCCTGTCGGCGGAGGAACAACATCAGACGATCCATCGTGCCTTCGCG
GGTTTGGAAGCGTTGGGCTTTGGGAGAGACGCGGCCACCCTGACAGCCCA
GGCGGCTTTAGCCTATTACTACCAACATGATTTGGCGGGCGCTCACCGGC
TCTGTCAGCAAATTCGCACCCAGGATCCCTTTTTCGACAAGTGTCTGCCC
CTCTACCTGGCATCTTTGGCCGAGCTGCGTCTAAAAACCGAGCTGTACTA
CGCGGCGCACAGACTGGTAGACACTCAGCCCAGGAGCGCGGTGGCGTGGT
TTGGCGTCGGGTGCTACTACGTCTGCATTCACAAAAATGAGACCGCGCAA
CGCTACTTCCATAAGGCTGCCAAGCTTGACCACACCTTCGTCCCTGCCTG
GATCGGATTCGGGAACGCCTTCGCCGCGCAGGACGAGAGCGAtcaggcca
tggccgcctaCCGGACTGCGGCGCGTCTCTTCCCTTCGGCGCACTTGCCC
TTGCTATACACAGGCATGGAGTACCTGCGGACCAACAATCTGTCCCTGGC
CTTACATTTCGTGCGGGAGGCTCACCGGCTCAACCCGATGGACGCCTTGG
TCCACAACGAATGGGGAGTGATCTTGTACCGCCGAGGACATTTCCGAGAG
GCCGCCGCCCGTTTCGAGAAGGTACTGGGCTTGGCCAGTGCGTCCAACAA
GGCCTGCACACTCGTGCGGTGGGAAGCAACGATGGTGAACCTGGCGCATT
GCTGTCGAAAGACTGGTCGCTTTAGGGAGGCCATCGCGTGGTATGAGCGA
GCTTTGGGCCTGTGTACTCAGAAAAGTGGGACCTACGTCGCCCTGGCTTT
CACCCACCACCTGTGTGGCGATCTGGATCGGGCCATCGAATACTACCACC
GTGGCCTTGGGCTGAAGAGTGACGATGCCTTTGCATCTGCCATGCTCACT
CAGGCGCTGCAGGACGCGGTATTGGGAGTCGAGACCGAGGAAGGCATGGA
AGGAGATAGGTTAGGGGATTGGTCGCCAGCGAGAGCCTCCCTGATTATGT
CTGTGCCCTTACCTTCTCCCTTGGCCATAAGTGTTGCGAAGGGGACTGAG
CGGGTGGGACGAAGAAGCAGTGTCGGGAGTGAGATTTTTAATGCCATGGA
TGAGGACCtgggaatggaagaggacagcGTGGATTTGTCGGAATAATATC
AACCAGAAAAAGGATTGAGAGAGCCAAGATAGTTTGATTCGACCTTTCAA
GGTCCAAAAGAAGAGATTGGGGAATTGCATGAGGAGTTACGGTATTTGAG
CTCAGTTATTGTTTTACAGTGTTTATTTTTACAGCGTTTTGACCCGTCTA
T back to topCoding sequence (CDS) from alignment at CM002465.1:298406..301406+ >rna5162 ID=rna5162|Name=rna5162|organism=Nannochloropsis gaditana|type=CDS|length=2433bp|location=Sequence derived from alignment at CM002465.1:298406..301406+ (Nannochloropsis gaditana)
ATGTTCACAACCGCCACTCCTGCTTCAGCCTTGGCGTATACAACGACCGT
CACGCGGAATCATACCAGCGAGACAAAAGGTGCAGTGGCGATGGCCATGA
AGGAGGCagctttctcgtcctcctacCCCGACCAAAGTCTCCGAGCACGT
GAAAGACACAAAGACAAGATCTCAAAAAAGCTTCGGCAGCTTGCCCAAGA
CGCCTTAAGCAAACGTTTGCCGGGCCGTGCGTGTTTTTACGCCGACAAAC
TAGTCCGCCTCACCGcaggccgcctccccgaggACGTGGTCTTGCTCGGC
CGGGCCCATTACCAGGCGCGGGCGAACCGGAAGGCCGTGCATGTCTTGGA
AAAATACGGCTTGTTGGCCATCAAGGATGCGCAGAGACCCTTGACTCGGC
AGGAGCAACACGCCTTGTTCACAGCCGCGGCTGGTTCTGTCCCTGCGGAG
ATAGATACGGCTGGCGGTGGTCAAAGCCTCAAGGGCAGCAGGAAGGACGC
GTCCGTCAGCAATGTACATACCACAGCAAGGAGCACATTAGAGGCGTATC
TCCTTGCTGCGCAATGTTTGGGAGCCTCCGATCCACAGGAGGAATGCTTG
CACCTCCTCGATCAGATTTTGCCGTgttgggaggacgaggaggaggatgc
ggaaggggaaggagataggggggagagaaggcaggaggagtcGCCGTGCG
AACGGCAGTCAAGACATTTGCGGAACGTTCGTGCAGCTGTTGTGGCGGCG
GGGCGTCAAAACGTCGCCGACGTGGCAGAAAGCTCCAAGTCGGGTTCCCG
GGGGGACAATCCCAGAAAGAAGGGCTCTTGGCGCGCGGAGACGTGGCGGC
AAGCGGAGATGCTGAGAGACGGTAAAGGAGAGCCAAGCTCCCGCTCGTTA
CGCCCGACAGAGCAGGCACAAGCAGTGCTCACCACGATCGCGGCCCTGTG
TTTCTTGCGCGCTCAAATTTTCGCAGGGCAGGACAATAGGGAGAGGGCTG
TGGCCTGGTGCCGGCATGCgttggaggtggacgtgtactgcgtggaggcg
ttggagtTCTTGGCCGATCGGAAACTTTTgtcgcaggaggaagaacagcG
GTTGCTGGCGCGGGAGTTGGCCTTCGACCccgggtcggaggaggaagggg
aggaggacgctgcAGGCACAgagcaggtggtgggagaTGACTGGCTCCGA
CTCATGTATGCGACTCGCCTCCTATGTTTCTCGGACGGCGTCCTGTCGGC
GGAGGAACAACATCAGACGATCCATCGTGCCTTCGCGGGTTTGGAAGCGT
TGGGCTTTGGGAGAGACGCGGCCACCCTGACAGCCCAGGCGGCTTTAGCC
TATTACTACCAACATGATTTGGCGGGCGCTCACCGGCTCTGTCAGCAAAT
TCGCACCCAGGATCCCTTTTTCGACAAGTGTCTGCCCCTCTACCTGGCAT
CTTTGGCCGAGCTGCGTCTAAAAACCGAGCTGTACTACGCGGCGCACAGA
CTGGTAGACACTCAGCCCAGGAGCGCGGTGGCGTGGTTTGGCGTCGGGTG
CTACTACGTCTGCATTCACAAAAATGAGACCGCGCAACGCTACTTCCATA
AGGCTGCCAAGCTTGACCACACCTTCGTCCCTGCCTGGATCGGATTCGGG
AACGCCTTCGCCGCGCAGGACGAGAGCGAtcaggccatggccgcctaCCG
GACTGCGGCGCGTCTCTTCCCTTCGGCGCACTTGCCCTTGCTATACACAG
GCATGGAGTACCTGCGGACCAACAATCTGTCCCTGGCCTTACATTTCGTG
CGGGAGGCTCACCGGCTCAACCCGATGGACGCCTTGGTCCACAACGAATG
GGGAGTGATCTTGTACCGCCGAGGACATTTCCGAGAGGCCGCCGCCCGTT
TCGAGAAGGTACTGGGCTTGGCCAGTGCGTCCAACAAGGCCTGCACACTC
GTGCGGTGGGAAGCAACGATGGTGAACCTGGCGCATTGCTGTCGAAAGAC
TGGTCGCTTTAGGGAGGCCATCGCGTGGTATGAGCGAGCTTTGGGCCTGT
GTACTCAGAAAAGTGGGACCTACGTCGCCCTGGCTTTCACCCACCACCTG
TGTGGCGATCTGGATCGGGCCATCGAATACTACCACCGTGGCCTTGGGCT
GAAGAGTGACGATGCCTTTGCATCTGCCATGCTCACTCAGGCGCTGCAGG
ACGCGGTATTGGGAGTCGAGACCGAGGAAGGCATGGAAGGAGATAGGTTA
GGGGATTGGTCGCCAGCGAGAGCCTCCCTGATTATGTCTGTGCCCTTACC
TTCTCCCTTGGCCATAAGTGTTGCGAAGGGGACTGAGCGGGTGGGACGAA
GAAGCAGTGTCGGGAGTGAGATTTTTAATGCCATGGATGAGGACCtggga
atggaagaggacagcGTGGATTTGTCGGAATAA back to top
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