EWM25520.1, cds5150 (CDS) Nannochloropsis gaditana

Overview
NameEWM25520.1
Unique Namecds5150
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002465.1:298819..301251 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM25520.1
Productanaphase-promoting complex subunit 6
Orig transcript idgnl|cribi|Naga_100032g15.263.mrna
GeneAPC6-cdc16
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002465.1supercontigCM002465.1:298819..301251 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR013026TPR-contain_dom
IPR011990TPR-like_helical_dom
IPR019734TPR_repeat
Homology
BLAST of EWM25520.1 vs. NCBI_GenBank
Match: gi|585107286|gb|EWM25520.1| (anaphase-promoting complex subunit 6 [Nannochloropsis gaditana])

HSP 1 Score: 1665.2 bits (4311), Expect = 0.000e+0
Identity = 810/810 (100.00%), Postives = 810/810 (100.00%), Query Frame = 0
Query:    1 MFTTATPASALAYTTTVTRNHTSETKGAVAMAMKEAAFSSSYPDQSLRARERHKDKISKKLRQLAQDALSKRLPGRACFYADKLVRLTAGRLPEDVVLLGRAHYQARANRKAVHVLEKYGLLAIKDAQRPLTRQEQHALFTAAAGSVPAEIDTAGGGQSLKGSRKDASVSNVHTTARSTLEAYLLAAQCLGASDPQEECLHLLDQILPCWEDEEEDAEGEGDRGERRQEESPCERQSRHLRNVRAAVVAAGRQNVADVAESSKSGSRGDNPRKKGSWRAETWRQAEMLRDGKGEPSSRSLRPTEQAQAVLTTIAALCFLRAQIFAGQDNRERAVAWCRHALEVDVYCVEALEFLADRKLLSQEEEQRLLARELAFDPGSEEEGEEDAAGTEQVVGDDWLRLMYATRLLCFSDGVLSAEEQHQTIHRAFAGLEALGFGRDAATLTAQAALAYYYQHDLAGAHRLCQQIRTQDPFFDKCLPLYLASLAELRLKTELYYAAHRLVDTQPRSAVAWFGVGCYYVCIHKNETAQRYFHKAAKLDHTFVPAWIGFGNAFAAQDESDQAMAAYRTAARLFPSAHLPLLYTGMEYLRTNNLSLALHFVREAHRLNPMDALVHNEWGVILYRRGHFREAAARFEKVLGLASASNKACTLVRWEATMVNLAHCCRKTGRFREAIAWYERALGLCTQKSGTYVALAFTHHLCGDLDRAIEYYHRGLGLKSDDAFASAMLTQALQDAVLGVETEEGMEGDRLGDWSPARASLIMSVPLPSPLAISVAKGTERVGRRSSVGSEIFNAMDEDLGMEEDSVDLSE 810
            MFTTATPASALAYTTTVTRNHTSETKGAVAMAMKEAAFSSSYPDQSLRARERHKDKISKKLRQLAQDALSKRLPGRACFYADKLVRLTAGRLPEDVVLLGRAHYQARANRKAVHVLEKYGLLAIKDAQRPLTRQEQHALFTAAAGSVPAEIDTAGGGQSLKGSRKDASVSNVHTTARSTLEAYLLAAQCLGASDPQEECLHLLDQILPCWEDEEEDAEGEGDRGERRQEESPCERQSRHLRNVRAAVVAAGRQNVADVAESSKSGSRGDNPRKKGSWRAETWRQAEMLRDGKGEPSSRSLRPTEQAQAVLTTIAALCFLRAQIFAGQDNRERAVAWCRHALEVDVYCVEALEFLADRKLLSQEEEQRLLARELAFDPGSEEEGEEDAAGTEQVVGDDWLRLMYATRLLCFSDGVLSAEEQHQTIHRAFAGLEALGFGRDAATLTAQAALAYYYQHDLAGAHRLCQQIRTQDPFFDKCLPLYLASLAELRLKTELYYAAHRLVDTQPRSAVAWFGVGCYYVCIHKNETAQRYFHKAAKLDHTFVPAWIGFGNAFAAQDESDQAMAAYRTAARLFPSAHLPLLYTGMEYLRTNNLSLALHFVREAHRLNPMDALVHNEWGVILYRRGHFREAAARFEKVLGLASASNKACTLVRWEATMVNLAHCCRKTGRFREAIAWYERALGLCTQKSGTYVALAFTHHLCGDLDRAIEYYHRGLGLKSDDAFASAMLTQALQDAVLGVETEEGMEGDRLGDWSPARASLIMSVPLPSPLAISVAKGTERVGRRSSVGSEIFNAMDEDLGMEEDSVDLSE
Sbjct:    1 MFTTATPASALAYTTTVTRNHTSETKGAVAMAMKEAAFSSSYPDQSLRARERHKDKISKKLRQLAQDALSKRLPGRACFYADKLVRLTAGRLPEDVVLLGRAHYQARANRKAVHVLEKYGLLAIKDAQRPLTRQEQHALFTAAAGSVPAEIDTAGGGQSLKGSRKDASVSNVHTTARSTLEAYLLAAQCLGASDPQEECLHLLDQILPCWEDEEEDAEGEGDRGERRQEESPCERQSRHLRNVRAAVVAAGRQNVADVAESSKSGSRGDNPRKKGSWRAETWRQAEMLRDGKGEPSSRSLRPTEQAQAVLTTIAALCFLRAQIFAGQDNRERAVAWCRHALEVDVYCVEALEFLADRKLLSQEEEQRLLARELAFDPGSEEEGEEDAAGTEQVVGDDWLRLMYATRLLCFSDGVLSAEEQHQTIHRAFAGLEALGFGRDAATLTAQAALAYYYQHDLAGAHRLCQQIRTQDPFFDKCLPLYLASLAELRLKTELYYAAHRLVDTQPRSAVAWFGVGCYYVCIHKNETAQRYFHKAAKLDHTFVPAWIGFGNAFAAQDESDQAMAAYRTAARLFPSAHLPLLYTGMEYLRTNNLSLALHFVREAHRLNPMDALVHNEWGVILYRRGHFREAAARFEKVLGLASASNKACTLVRWEATMVNLAHCCRKTGRFREAIAWYERALGLCTQKSGTYVALAFTHHLCGDLDRAIEYYHRGLGLKSDDAFASAMLTQALQDAVLGVETEEGMEGDRLGDWSPARASLIMSVPLPSPLAISVAKGTERVGRRSSVGSEIFNAMDEDLGMEEDSVDLSE 810          
BLAST of EWM25520.1 vs. NCBI_GenBank
Match: gi|1173948684|gb|OQR96789.1| (cell division cycle protein 16, partial [Thraustotheca clavata])

HSP 1 Score: 352.443 bits (903), Expect = 1.513e-107
Identity = 197/456 (43.20%), Postives = 274/456 (60.09%), Query Frame = 0
Query:  297 SRSLRPTEQAQAVLTTIAALCFLRAQIFAGQDNRERAVAWCRHALEVDVYCVEALEFLADRKLLSQEEEQRLLARELAFDPGSEEEGEEDAAGTEQVVGDDWLRLMYATRLLCFSDGVLSAEEQHQTIHRAFAGLEALGFGRDAATLTAQAALAYYYQHDLAGAHRLCQ-------------QIRTQDPFFDKCLPLYLASLAELRLKTELYYAAHRLVDTQPRSAVAWFGVGCYYVCIHKNETAQRYFHKAAKLDHTFVPAWIGFGNAFAAQDESDQAMAAYRTAARLFPSAHLPLLYTGMEYLRTNNLSLALHFVREAHRLNPMDALVHNEWGVILYRRGHFREAAARFEKVLGLASASNKACTLVRWEATMVNLAHCCRKTGRFREAIAWYERALGLCTQKSGTYVALAFTHHLCGDLDRAIEYYHRGLGLKSDDAFASAMLTQALQDAVLGV 739
            + S++ TE+ Q  +  +A+LC LR ++    ++RERA  W R AL+ DV+C +A   L D+++LS EEE R+L   L F                    D +L+ +YA +L C  D   S +E+ Q +       E  G G +   + A+A  AY+YQHD   A+RLC+             +IR ++P+  KC+P+Y+A+L +L  K+EL++ AH++VD  P++A AW+ VGCYY+ I K +TAQR+FHKA  ++  F PAWIGFGN+FAAQDESDQAM++YRTAARLF   HLPLL  GME+ RTNNL+LA  FVR+A  + P D LV+NE G I +R+G +  A   F K + L    ++   LV WEAT  NLA   RK   F  AI +Y++AL L  +K+ T+ AL FT+HL G LD AI+ YH  LG   +D  A   L  AL+D   GV
Sbjct:  166 ANSMQTTERMQ--INVVASLCCLRGEVCEALESRERATYWYRLALQCDVHCSDAFTHLVDKQMLSAEEEHRML-ESLQFTAPH----------------DQYLKSLYAAQL-CRYDQSPSIQEKFQPVE------EIYGLGDNVDVVLAKAE-AYHYQHDTERAYRLCKWYSKGQVLGVIYCRIREREPYNYKCIPVYVATLVQLEQKSELFHFAHQMVDMYPKNAAAWYTVGCYYLLIKKFDTAQRFFHKATNIEPHFAPAWIGFGNSFAAQDESDQAMSSYRTAARLFLGCHLPLLCIGMEHYRTNNLALAAQFVRQACDVCPSDPLVYNELGTICFRQGDYSGAVKNFSKAISLCRHFSRT-LLVAWEATFFNLAQAYRKLKVFDVAIEYYDQALRLSPKKASTHFALGFTYHLQGKLDDAIQCYHIALGYDPEDPIAIQTLDDALKDMFDGV 593          
BLAST of EWM25520.1 vs. NCBI_GenBank
Match: gi|971516420|dbj|GAQ81809.1| (Anaphase-promoting complex [Klebsormidium nitens])

HSP 1 Score: 340.117 bits (871), Expect = 6.089e-104
Identity = 189/428 (44.16%), Postives = 254/428 (59.35%), Query Frame = 0
Query:  310 LTTIAALCFLRAQIFAGQDNRERAVAWCRHALEVDVYCVEALEFLADRKLLSQEEEQRLLARELAFDPGSEEEGEEDAAGTEQVVGDDWLRLMYATRLLCFSDGVLS--AEEQHQTIHRAFAGLEALGFG-RDAATLTAQAALAYYYQHDLAGAHRLCQQIRTQDPFFDKCLPLYLASLAELRLKTELYYAAHRLVDTQPRSAVAWFGVGCYYVCIHKNETAQRYFHKAAKLDHTFVPAWIGFGNAFAAQDESDQAMAAYRTAARLFPSAHLPLLYTGMEYLRTNNLSLALHFVREAHRLNPMDALVHNEWGVILYRRGHFREAAARFEKVLGLASASNKACTLVRWEATMVNLAHCCRKTGRFREAIAWYERALGLCTQKSGTYVALAFTHHLCGDLDRAIEYYHRGLGLKSDDAFASAMLTQALQD 734
            +  +AA C LR + F   DNR +A+ W +  L  D YC EA E L D ++LS + E +LL   L F P                  D WL L+Y  + + F   +    A E  ++   A +   + G+G R    L A  A   Y++ +    + L + +  +DP+   C+P+++A+  ELR K EL+  AH+LV   P+ AVAWF VG YY CI   ++A+RYF K+  LD +F PAW+GFGNAFAAQDESDQAMAAYRTAARLFP  HLP L  G+EY +TNNL+LA  F+++A +L P D L++NE GV+ YR    R+A +   K L LA           WEAT VNL H  RK  ++ EAI WY++ALGLC + + TY AL +THHL   L  AIEYYH+ LGLK+DD F + MLT+AL+D
Sbjct:  121 INIVAANCLLRGRAFEALDNRTKALFWYKATLRADPYCYEAFEHLFDNRMLSADAEAKLL-DSLKF-PAE----------------DRWLALLYQCKSVKFGQRLFEERAVELERSADDAPSTSGSDGWGLRGNGDLLACRADNLYHRAEYQQCYDLTKSVLERDPYHLACMPVHVAAALELRRKNELFLLAHKLVQEYPQKAVAWFAVGAYYSCIRNYDSARRYFAKSTSLDSSFAPAWLGFGNAFAAQDESDQAMAAYRTAARLFPGCHLPSLCIGIEYQKTNNLNLAEQFLKDAQKLCPQDPLIYNELGVLSYRNKDHRKAESWLRKALSLAPEPLTDA----WEATCVNLGHALRKQRKYAEAIDWYDKALGLCPRSASTYAALGYTHHLMDQLTLAIEYYHKALGLKADDTFTAEMLTRALED 526          
BLAST of EWM25520.1 vs. NCBI_GenBank
Match: gi|676388421|ref|XP_009037489.1| (hypothetical protein AURANDRAFT_1722, partial [Aureococcus anophagefferens] >gi|323451683|gb|EGB07559.1| hypothetical protein AURANDRAFT_1722, partial [Aureococcus anophagefferens])

HSP 1 Score: 330.102 bits (845), Expect = 8.926e-102
Identity = 200/432 (46.30%), Postives = 257/432 (59.49%), Query Frame = 0
Query:  314 AALCFLRAQIFAGQDNRERAVAWCRHALEVDVYCVEALEFLADRKLLSQEEEQRLLARELAFDPGSEEEGEEDAAGTEQVVGDD--WLRLMYATRLLCFSDGVLSAEEQHQTIHRAFAGLEAL-GFGRDAATLTAQAALAYYYQHDLAGAHRLCQQIRTQDPFFDKCLPLYLASLAELRLKTELYYAAHRLVDTQPRSAVAWFGVGCYYVCIHKNETAQRYFHKAAKLDHTFVPAWIGFGNAFAAQDESDQAMAAYRTAARLFPSAHLPLLYTGMEYLRTNNLSLALHFVREAHRLNPMDALVHNEWGVILYRRGHFREAAARFEKVLGLA------SASNKACTLVRWEATMVNLAHCCRKTGRFREAIAWYERALGLCTQKSGTYVALAFTHHLCGD--LDRAIEYYHRGLGLKSDDAFASAMLTQALQD 734
            AA C +    +   +NR RAVAW   AL +D  C EAL FL +R+LLS  EE+RLL             GE  AA T    GDD  W+  +Y  RL C  D   S EE+       F GLE + G G +A  L A+A  +YY QHD  GAH L +++   DP+   C+P+YLAS+ EL LK EL+Y AH LV   P+ A +WF VGCYY+ + KN+ AQRYFHK+AKL   F PAWIGFGNAFAAQDES+QAMAAYR+A+RLF  +H+PL++ GMEYLRTNNL LA HF+R A +L   D +V NE GV+  R+G + +A   F  VL L       S    AC     E+++ NLA   RK  RF +A  ++E AL L    +    AL  T H  G   + +A+E YH  L ++ DD F S ML++AL+D
Sbjct:   13 AAACTVAGVAYEALENRSRAVAWLVRALRLDATCSEALTFLVERRLLSAVEEKRLL-------------GELRAALT----GDDDAWIAAVYGARL-CVHDAEQSVEER-------FGGLERVHGLGENAEVLCARAEHSYY-QHDCRGAHALARRVYGADPYDFACVPVYLASMVELGLKHELFYCAHELVRAYPKHAASWFAVGCYYLLVGKNDAAQRYFHKSAKLAPRFAPAWIGFGNAFAAQDESEQAMAAYRSASRLFQGSHVPLMFIGMEYLRTNNLPLAKHFLRGARKLCGSDPMVLNELGVVELRQGLYADAEQTFSDVLVLFERLPDRSPLKSAC-----ESSVFNLAQTYRKMKRFDDAARYFELALALKPGDAAIRGALGVTLHALGGAHVHKAVECYHTALAMRPDDTFCSEMLSRALRD 413          
BLAST of EWM25520.1 vs. NCBI_GenBank
Match: gi|669139534|ref|XP_008605335.1| (hypothetical protein SDRG_01579 [Saprolegnia diclina VS20] >gi|530743379|gb|EQC41621.1| hypothetical protein SDRG_01579 [Saprolegnia diclina VS20])

HSP 1 Score: 335.88 bits (860), Expect = 2.525e-101
Identity = 179/425 (42.12%), Postives = 253/425 (59.53%), Query Frame = 0
Query:  310 LTTIAALCFLRAQIFAGQDNRERAVAWCRHALEVDVYCVEALEFLADRKLLSQEEEQRLLARELAFDPGSEEEGEEDAAGTEQVVGDDWLRLMYATRLLCFSDGVLSAEEQHQTIHRAFAGLEALGFGRDAATLTAQAALAYYYQHDLAGAHRLCQQIRTQDPFFDKCLPLYLASLAELRLKTELYYAAHRLVDTQPRSAVAWFGVGCYYVCIHKNETAQRYFHKAAKLDHTFVPAWIGFGNAFAAQDESDQAMAAYRTAARLFPSAHLPLLYTGMEYLRTNNLSLALHFVREAHRLNPMDALVHNEWGVILYRRGHFREAAARFEKVLGLASASNKACTLVRWEATMVNLAHCCRKTGRFREAIAWYERALGLCTQKSGTYVALAFTHHLCGDLDRAIEYYHRGLGLKSDDAFASAMLTQALQD 734
            +  +A+LC LR ++    ++RERA  W R AL+ DV+C +A   L ++ +LS  +E+R+L   L F                ++  D +L+ +Y  +L  +      A++        F  LE +    D   +    A AY+YQH+   A++LC+ +R +DPF  +C+ +++A+L +L  K+EL++ AH++VD  PR A +W+ VGCYYV + K +TAQRYFHKA  L+  F PAWIGFGN FA QDESDQAM++YRTA RL    H+PLL  GME+ RTNNL+LA HFV +A  + P D LV+NE G I +R+  + +A   F K + L    ++   LV WEAT  NLA   RK  ++  AIA YERAL LC + + T+ AL FT+HLCG LD AI+ YH  L    +D  A   L  ALQD
Sbjct:  190 INVVASLCCLRGEVCEALESRERASYWYRVALQCDVHCADAFTHLIEKHMLSSSQERRML-DTLHF----------------RLPHDAYLKALYTAQLGRYDHAPAIADK--------FRPLEEVFKLADNVDVVVAKAEAYFYQHNTEQAYQLCKWVRERDPFHYQCIAVFVATLVQLERKSELFHFAHQMVDMYPRKAASWYTVGCYYVLVKKLDTAQRYFHKATNLEPQFAPAWIGFGNVFAMQDESDQAMSSYRTATRLVLGCHVPLLCIGMEHYRTNNLALASHFVHQACDVCPSDPLVYNELGTICFRQREYSDAVDHFTKAIALCEHFSQT-RLVAWEATFFNLAQAYRKLEQYDAAIATYERALSLCPRNASTHFALGFTYHLCGRLDEAIQCYHTALSYDPEDPIAIQTLDDALQD 588          
BLAST of EWM25520.1 vs. NCBI_GenBank
Match: gi|299116651|emb|CBN74796.1| (Putative subunit of the Anaphase Promoting Complex [Ectocarpus siliculosus])

HSP 1 Score: 340.117 bits (871), Expect = 1.391e-100
Identity = 194/443 (43.79%), Postives = 263/443 (59.37%), Query Frame = 0
Query:  310 LTTIAALCFLRAQIFAGQDNRERAVAWCRHALEVDVYCVEALEFLADRKLLSQEEEQRLLARELAFDPGSEEEGEEDAAGTEQVVGDDWLRLMYATRLLCFSDGVLSAEEQHQTIHRAFAGLEALGFGRDAATLTAQAALAYYYQHDLAGAHRLCQQIRTQDPFFDKCLPLYLASLAELRLKTELYYAAHRLVDTQPRSAVAWFGVGCYYVCIHKNETAQRYFHKAAKLDHTFVPAWIGFGNAFAAQDESDQAMAAYRTAARLFPSAHLPLLYTGMEYLRTNNLSLALHFVREAHRLNPMDALVHNE-----WGVILYRRGHFREAAARFEKVLGLASA-SNKACTLVRWEATMVNLAHCCRKTGRFREAIAWYERALGLCTQKSGTYVALAFTHHLCGDLDRAIEYYHRGLGLKSDDAFASAMLTQALQDAVLGVETEEGME 746
            +  +AALC LR Q +A  DNR RA  W R ALE+D  CVEAL+ L    LLS +E+  +++          E GEE          + WL  ++ +++               +  + F  L  +G G +   L A+A   Y  Q+D   A  +C+Q+   DP    CLP+YLA++ EL++K++L+Y AH+LV+  P+ AV+WF V CYY  + KNE AQRYF K+ KLD  F PAWIGFGNAFAAQ+E+DQA++AYRTAARLF  +HL LLY GMEY+RT+NL+LA +F+  A  L+P D LV NE      GV+ +  G + +A  RF KVL +    S++A  L  WE+T+ NL HC RK G   +A + Y RA  L  Q+   + ALA THHL G  D AI  YH+ LGLK DD FA+ ML +ALQ++    E   G+E
Sbjct:  282 VDVLAALCCLRGQAYAYLDNRPRAAVWLRTALEIDARCVEALQCLTRWHLLSIDEQASMVS--------GLEYGEEQQ--------ESWLHFLFKSQI----------NRPPGSRAKVFGDLGRVGLGGNLDVLAAKAECCYE-QNDAQQALEICRQVFRTDPHNSACLPVYLAAMVELKMKSQLFYTAHQLVEAGPKQAVSWFAVACYYHLLDKNELAQRYFLKSTKLDGRFAPAWIGFGNAFAAQEETDQAVSAYRTAARLFQGSHLALLYIGMEYVRTHNLALARNFLMGALALSPSDPLVLNEVLIGKLGVVHFASGEYTQARERFGKVLSIVEGLSSQA--LEAWESTVFNLGHCHRKLGSLDDAASCYLRARELSPQRHSVHSALALTHHLQGRHDDAIAGYHKALGLKPDDPFAAEMLKRALQESFSANEPCAGLE 695          
BLAST of EWM25520.1 vs. NCBI_GenBank
Match: gi|1173926764|gb|OQR80916.1| (cell division cycle protein 16 [Achlya hypogyna])

HSP 1 Score: 332.413 bits (851), Expect = 6.080e-100
Identity = 177/426 (41.55%), Postives = 252/426 (59.15%), Query Frame = 0
Query:  310 LTTIAALCFLRAQIFAGQDNRERAVAWCRHALEVDVYCVEALEFLADRKLLSQEEEQRLLARELAFDPGSEEEGEEDAAGTEQVVGDDWLRLMYATRLLCFSDGVLSAEEQHQTIHRAFAGLE-ALGFGRDAATLTAQAALAYYYQHDLAGAHRLCQQIRTQDPFFDKCLPLYLASLAELRLKTELYYAAHRLVDTQPRSAVAWFGVGCYYVCIHKNETAQRYFHKAAKLDHTFVPAWIGFGNAFAAQDESDQAMAAYRTAARLFPSAHLPLLYTGMEYLRTNNLSLALHFVREAHRLNPMDALVHNEWGVILYRRGHFREAAARFEKVLGLASASNKACTLVRWEATMVNLAHCCRKTGRFREAIAWYERALGLCTQKSGTYVALAFTHHLCGDLDRAIEYYHRGLGLKSDDAFASAMLTQALQD 734
            +  +A+LC LR ++    ++RERA  W R AL+ D +C +A   LA++ +L+ E+E+R+        P                  DD+L+ +YA +L           +Q  TI   F  +E   G   +   + A+A  A +YQH+   A++LC+ +R +DP+  KC+P+Y+A+L +L  K+EL++ AH++VD  P+ A AW+ VGCYYV + K +TAQR+FHKA  ++  F PAWIGFGNAFAAQDESDQAM++YRTA RLF   H PLL  GME+ RTNNL+LA HFV +A  + P D LV+NE G I +R+ +++ A   F K + L    ++   LV WEAT  NL    RK  ++  AI  Y  AL LC +K+ T+ AL FT+HL G L  AI+ YH  L    +D  A   L  AL+D
Sbjct:  192 INVVASLCCLRGEVCEALESRERAAYWYRLALQCDAHCADAFTNLAEKHMLTPEQERRMFESLHFRHPH-----------------DDYLKALYAAQL--------GRYDQFPTIQEKFQPVEEVFGLSENVDVVVAKAE-ASFYQHNTDKAYQLCKWVRERDPYNYKCIPVYVATLVQLERKSELFHFAHQMVDMYPKKAAAWYTVGCYYVLVKKFDTAQRFFHKATNIEPHFAPAWIGFGNAFAAQDESDQAMSSYRTATRLFLGCHFPLLCIGMEHYRTNNLALAAHFVSQACDMCPFDPLVYNELGTICFRQQNYQGAVDNFSKAITLCQHLSQT-LLVPWEATYFNLGQSYRKLKQYGRAIHNYHLALDLCPRKASTHFALGFTYHLQGRLHDAIQCYHLALSYDPEDPVAIQTLDDALKD 590          
BLAST of EWM25520.1 vs. NCBI_GenBank
Match: gi|302818781|ref|XP_002991063.1| (hypothetical protein SELMODRAFT_272183 [Selaginella moellendorffii] >gi|302820017|ref|XP_002991677.1| hypothetical protein SELMODRAFT_272222 [Selaginella moellendorffii] >gi|300140526|gb|EFJ07248.1| hypothetical protein SELMODRAFT_272222 [Selaginella moellendorffii] >gi|300141157|gb|EFJ07871.1| hypothetical protein SELMODRAFT_272183 [Selaginella moellendorffii])

HSP 1 Score: 328.561 bits (841), Expect = 1.490e-99
Identity = 191/445 (42.92%), Postives = 252/445 (56.63%), Query Frame = 0
Query:  295 PSSRSLRPTEQAQAVLTTIAALCFLRAQIFAGQDNRERAVAWCRHALEVDVYCVEALEFLADRKLLSQEEEQRLLARELAFDPGSEEEGEEDAAGTEQVVGDDWLRLMYATRLLCFSDGVLSA-EEQHQTIHRAFAGLEALGFG-RDAATLTAQAALAYYYQHDLAGAHRLCQQIRTQDPFFDKCLPLYLASLAELRLKTELYYAAHRLVDTQPRSAVAWFGVGCYYVCIHKNETAQRYFHKAAKLDHTFVPAWIGFGNAFAAQDESDQAMAAYRTAARLFPSAHLPLLYTGMEYLRTNNLSLALHFVREAHRLNPMDALVHNEWGVILYRRGHFREAAARFEKVLGLASASNKACTLVRWEATMVNLAHCCRKTGRFREAIAWYERALGLCTQKSGTYVALAFTHHLCGDLDRAIEYYHRGLGLKSDDAFASAMLTQALQDAVL 737
            P    + P    QA +   AALC LR +     +NR RA+ W + +L VD YC EA E + D  +LS E+E   L+  L FD                   D WL L+Y+ +   +  G +SA E +   + R       +G   +D   + A  A   Y++ +    + + + +  +DP+  KC+PL+L +  EL  K EL+  AH LV    +  +AWF VGCYY CI + + A+RYF KA  LD  F PAW+GFGNA+AAQDESDQAMAAYRTAARLF   H+P L  GMEYLRTNNL+LA  F  +A  + P D LV+NE GV+ YR   + EAA    K L L   +  + TL  WE T+VNLAH  RK   + EAI+ YE+AL LC + + TY AL FTHHL G    AI++YH+ LGLK DD F + MLT AL +  L
Sbjct:  103 PMKDDIDPESGHQAGINIAAALCLLRGRACEALENRTRALCWYKASLRVDPYCYEAYEHIVDNHMLSSEKEVAFLS-SLKFD-----------------ADDRWLSLLYSCQAKKY--GQISALESKLSELEREPQKHSNVGLSLKDNNDVLACRADYLYHRGEFQLCYDITKTLLEKDPYHLKCMPLHLGAALELGRKNELFLRAHNLVQEYSQRPIAWFAVGCYYYCIRQFDHARRYFCKATTLDGAFYPAWLGFGNAYAAQDESDQAMAAYRTAARLFSGCHMPALCIGMEYLRTNNLNLAEQFFMQAKGICPTDPLVYNELGVMAYRNREYEEAARWLRKALVLVQETRNSLTLC-WEPTVVNLAHTLRKLKLYPEAISMYEKALALCPRGATTYAALGFTHHLQGSTGIAIDFYHKALGLKPDDTFTAEMLTAALTEECL 526          
BLAST of EWM25520.1 vs. NCBI_GenBank
Match: gi|675177069|ref|XP_008897419.1| (hypothetical protein PPTG_05588 [Phytophthora parasitica INRA-310] >gi|568103250|gb|ETN17921.1| hypothetical protein PPTG_05588 [Phytophthora parasitica INRA-310])

HSP 1 Score: 333.954 bits (855), Expect = 3.223e-99
Identity = 178/430 (41.40%), Postives = 251/430 (58.37%), Query Frame = 0
Query:  309 VLTTIAALCFLRAQIFAGQDNRERAVAWCRHALEVDVYCVEALEFLADRKLLSQEEEQRLLARELAFDPGSEEEGEEDAAGTEQVVGDDWLRLMYATRLLCFSDGVLSAEEQHQTIHRAFAGLEALGFGRDAATLTAQAALAYYYQHDLAGAHRLCQQIRTQDPFFDKCLPLYLASLAELRLKTELYYAAHRLVDTQPRSAVAWFGVGCYYVCIHKNETAQRYFHKAAKLDHTFVPAWIGFGNAFAAQDESDQAMAAYRTAARLFPSAHLPLLYTGMEYLRTNNLSLALHFVREAHRLNPMDALVHNEWGVILYRRGHFREAAARFEKVLGLASASNKACTLVRWEATMVNLAHCCRKTGRFREAIAWYERALGLCTQKSGTYVALAFTHHLCGDLDRAIEYYHRGLGLKSDDAFASAMLTQALQDAVLG 738
            V+  +++L  L  + F    NRE A  + R AL  DV+C EA   L D+++LS +EE+ L+A   + D   +E                 L L+Y T +  + D     EE+   + + F GL       D   L    A  YYYQHD+  AH +C+ +R +DPF  + + +Y+ +L EL  K ELY+ AH++VD  P  A AW+ VGCYY+ I K ETAQRYFHKA  L+ ++ PAWIGFGN+FAAQDESDQAM++YRTA  LFP +HLP LY GMEYLRTNNL  AL F+R+A  + P D LV+NE G + Y+   + +A   F K L L     +   +  WE T+ NL +  RK  +F +AI +++ AL L  + S    AL FT+H+ G+L++AIE YH  L    +D  A +M+T A ++++ G
Sbjct:  277 VINVVSSLALLMGETFEAIGNRENATVYFRIALRCDVHCSEAFFHLFDKQMLSAQEEKELVA---SLDFSVDEM--------------QLLELLYQTHVGKY-DTTTPVEERFAEVEQEF-GLA------DNLELNITRAETYYYQHDIQLAHEICESVRERDPFNFRVISVYVGTLVELGKKRELYHYAHQMVDVYPTKASAWYTVGCYYLLIQKYETAQRYFHKATSLEPSYAPAWIGFGNSFAAQDESDQAMSSYRTALSLFPGSHLPPLYIGMEYLRTNNLVQALEFIRQASVICPTDPLVYNELGSVYYKEKDYPQAIEMFTKALQLCKGLPERL-MEAWEPTLFNLGYSYRKLRKFDQAIHYFQSALRLSPRNSSILAALGFTYHMKGNLEQAIESYHAALAYAPEDTLAGSMITIAFEESLSG 680          
BLAST of EWM25520.1 vs. NCBI_GenBank
Match: gi|566010918|gb|ETI33829.1| (hypothetical protein F443_19528 [Phytophthora parasitica P1569])

HSP 1 Score: 332.413 bits (851), Expect = 1.541e-98
Identity = 177/430 (41.16%), Postives = 250/430 (58.14%), Query Frame = 0
Query:  309 VLTTIAALCFLRAQIFAGQDNRERAVAWCRHALEVDVYCVEALEFLADRKLLSQEEEQRLLARELAFDPGSEEEGEEDAAGTEQVVGDDWLRLMYATRLLCFSDGVLSAEEQHQTIHRAFAGLEALGFGRDAATLTAQAALAYYYQHDLAGAHRLCQQIRTQDPFFDKCLPLYLASLAELRLKTELYYAAHRLVDTQPRSAVAWFGVGCYYVCIHKNETAQRYFHKAAKLDHTFVPAWIGFGNAFAAQDESDQAMAAYRTAARLFPSAHLPLLYTGMEYLRTNNLSLALHFVREAHRLNPMDALVHNEWGVILYRRGHFREAAARFEKVLGLASASNKACTLVRWEATMVNLAHCCRKTGRFREAIAWYERALGLCTQKSGTYVALAFTHHLCGDLDRAIEYYHRGLGLKSDDAFASAMLTQALQDAVLG 738
            V+  +++L  L  + F    NRE A  + R AL  DV+C EA   L D+++LS +EE+ L+A   + D   +E                 L L+Y T +  + D     EE+   + + F GL       D   L    A  YYYQHD+  AH +C+ +R +DPF  + + +Y+ +L EL  K ELY+ AH++VD  P  A AW+ VGCYY+ I K E AQRYFHKA  L+ ++ PAWIGFGN+FAAQDESDQAM++YRTA  LFP +HLP LY GMEYLRTNNL  AL F+R+A  + P D LV+NE G + Y+   + +A   F K L L     +   +  WE T+ NL +  RK  +F +AI +++ AL L  + S    AL FT+H+ G+L++AIE YH  L    +D  A +M+T A ++++ G
Sbjct:  277 VINVVSSLALLMGETFEAIGNRENATVYFRIALRCDVHCSEAFFHLFDKQMLSAQEEKELVA---SLDFSVDEM--------------QLLELLYQTHVGKY-DTTTPVEERFAEVEQEF-GLA------DNLELNITRAETYYYQHDIQLAHEICESVRERDPFNFRVISVYVGTLVELGKKRELYHYAHQMVDVYPTKASAWYTVGCYYLLIQKYEAAQRYFHKATSLEPSYAPAWIGFGNSFAAQDESDQAMSSYRTALSLFPGSHLPPLYIGMEYLRTNNLVQALEFIRQASVICPTDPLVYNELGSVYYKEKDYPQAIEMFTKALQLCKGLPERL-METWEPTLFNLGYSYRKLRKFDQAIHYFQSALRLSPRNSSILAALGFTYHMKGNLEQAIESYHAALAYAPEDTLAGSMITIAFEESLSG 680          
The following BLAST results are available for this feature:
BLAST of EWM25520.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585107286|gb|EWM25520.1|0.000e+0100.00anaphase-promoting complex subunit 6 [Nannochlorop... [more]
gi|1173948684|gb|OQR96789.1|1.513e-10743.20cell division cycle protein 16, partial [Thraustot... [more]
gi|971516420|dbj|GAQ81809.1|6.089e-10444.16Anaphase-promoting complex [Klebsormidium nitens][more]
gi|676388421|ref|XP_009037489.1|8.926e-10246.30hypothetical protein AURANDRAFT_1722, partial [Aur... [more]
gi|669139534|ref|XP_008605335.1|2.525e-10142.12hypothetical protein SDRG_01579 [Saprolegnia dicli... [more]
gi|299116651|emb|CBN74796.1|1.391e-10043.79Putative subunit of the Anaphase Promoting Complex... [more]
gi|1173926764|gb|OQR80916.1|6.080e-10041.55cell division cycle protein 16 [Achlya hypogyna][more]
gi|302818781|ref|XP_002991063.1|1.490e-9942.92hypothetical protein SELMODRAFT_272183 [Selaginell... [more]
gi|675177069|ref|XP_008897419.1|3.223e-9941.40hypothetical protein PPTG_05588 [Phytophthora para... [more]
gi|566010918|gb|ETI33829.1|1.541e-9841.16hypothetical protein F443_19528 [Phytophthora para... [more]
back to top
Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna5162rna5162Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications