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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100115g2.6569.mrna |
| Orig protein id | gnl|cribi|Naga_100115g2.6569 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002455.1 | supercontig | CM002455.1:1298441..1301274 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna516 ID=rna516|Name=rna516|organism=Nannochloropsis gaditana|type=mRNA|length=1153bp
GCATGGAGTGGTCCCATCCCTTCCCGCCACCCCCTCATAATTCTTTCTCC
CTCTTCCTCTCTCTTCCTCGCCCGCCCTCCCTCCCTCCTCCTTCCCTCCA
GACGGGCCCCAAGATCAAGCCTATCCGCACCTGGGAGGCAGTCAAACAGA
TGCACCTGATGGATTGCATGCAGACATGTCCTTTCGTCCATCAGACGCTG
AGCGACCTTCGCAAAGAAGTTGGGAACCAGGCAACCGTCTTGGGCTTTGT
CGGCCTTCCTTACACCCTGGCCACCTACATTGTGGAAGGGCAGAGCTCAA
AGGAATACTTGGAGATCAAGAAAATGATGTTTCAGGAACCTGCGCTCTTG
CAGCAAATGCTGAGCGTTTTGGCCGACAACATCGGGGAATATGCCTGCTT
CCAGATCGACGCCGGCGCGCAGGTGATCCAAGTCTTTGACTCATGGGCTG
GCCACCTCTCCCCCGCCGACTACGACATCTTCGCCGCGCCTTACCAGCGT
CAAGTCATCGAAAAAATCAAGGCCAAACACCCCACGGTGCCCATCATTAT
TTATATCAACAAGAGCGGGGCCCTTTTGGAAAGGATGGCACAGTCTGGCG
CCGATATGGTCTCTTTGGATTGGACCGTGACCATGGAGGAAGGCCGTCGG
CGGTTGGGCAGTGAGATGGGGGTGCAGGGGAACCTGGACCCGGCGATTTT
GTATGCGCCGAAAGAGGTGATCAAGGAGAGGGCCGAGCAGATATTGCGGG
AAGGGAAAGGGTTCAAGCATGTGATGAACCTGGGGCATGGGATCGAAGCG
ACCACCCCGGAGGAGAACGCCAAGTTTTTCATCGACACGGTCAAGGCATG
GCGGTATTGAAGGAGAGGGCAGGGTGTAGGGGGGGAAAATGGAGGCTTGC
GAAGGGGCGGGGGCGAGGACAGGTGGAAGTCCGGCAAATAATCGGATAGG
GGTAAAGGGAGGAGGGAGGGCGGGGACGCGTCTCGGTGGAGGGTGGGGGC
GACGGGGTATGGACCGGCTCGTGTTTATGGAAATAAAACAATTGGCCAGG
CGGTTCATGACAAGGGCGATATACTGGCATTGGGGTCTAGGGCCTGGTTC
ATGCTTGTGCTTTCCTTTGCGACATAGGATGCCCCTTAGCACCTTGCGTC
CCC back to topprotein sequence of rna516 >rna516-protein ID=rna516-protein|Name=rna516|organism=Nannochloropsis gaditana|type=polypeptide|length=857bp
MITFSRRGSLTEKGSAYVAVGRIASVALVGLGFTPLHLLYLHLRGKARRR
NLFACLLENVLAYFLLVSSVRHVLHAPPAKTRQQQRRQVLGIISAAILVF
AHAFIVAAQVTALALMGSRMNGDFIYNLVYAVKTCTWRETDAKYFFPLML
SATLAIDMVWLWYALLTPRSVECRTEKNDDTAADKVQEKISARQSSTVNR
WYLALSIIGLLRGVVFWRGYSPVANTLYSLVQYSRMKGPSSLKRSQKYGS
GIPRKAHKIYKYDYASLPERVAGNAAEALGRSTNEEAQIQKQRKKTNVIL
LLSESFGNSLLKTEEGLEAFPFYENVVQRDPDIYDFTNNRAVSGNTLTAA
SAALVGSYVAAPDLHPDTWTFFDLPNLFTLGKALGYRLVLFMPYDHEDWF
PFTGIYEDRFDKIVSRSTLGERAVNDMGMDDRLVTAEVLKFLEEEGAKQR
RHREKELLREQRASECQETYGEWPHHDSQVGKGDGPQEGEREQQHHQRNE
QEVGYTGSEYHVESEHDQEKGGVGEVRRHHGTEASENDDEEAEKFILVVF
WNHLHTPFLVNDEANPINQTLLDLTRASNARKQDETTTIDESSEKRAAAS
APPKARPKKTLVPPEVRSSSSLDALTRLGMKEDRAVSAMQIGNKMMHDVY
DTLQSSGLLENTLISFQSDHGETAGPVVRKRLADPDSLYLATPLWMHIPP
TLLTDTQRATLRANGDRLTSNMDVMPTFVEILGWESADSMFDGVPSIFKH
GVSLLRPVEHDRVTSGWQGPPFVDSCDWAHGFVFNASHTLILRVPDNDAV
LEALDEEDGTWTTVKQRVPLKDLPGEELAWWMQELQTNHADMMKTMKECF
WDYLWES back to topmRNA from alignment at CM002455.1:1298441..1301274- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna516 ID=rna516|Name=rna516|organism=Nannochloropsis gaditana|type=mRNA|length=2834bp|location=Sequence derived from alignment at CM002455.1:1298441..1301274- (Nannochloropsis gaditana)
GATGATCACTTTCTCAAGGAGAGGGTCTCTCACTGAGAAAGGAAGTGCAT
ATGTTGCCGTTGGAAGGATTGCTTCGGTTGCTTTGGTGGGACTGGGATTC
ACGCCTTTGCATCTCCTTTACCTTCATCTCCGTGGTAAAGCGCGGCGTCG
AAATTTGTTTGCGTGTCTCTTGGAGAATGTACTCGCTTACTTTCTATTGG
TATCAAGCGTGCGGCACGTACTGCATGCCCCACCCGCCAAAACTCGACAG
CAGCAGCGGCGACAGGTTCTGGGGATCATATCGGCAGCAATCCTTGTCTT
TGCACATGCCTTCATTGTAGCCGCTCAAGTGACTGCGCTGGCCTTAATGG
GCTCGCGAATGAATGGAGACTTCATCTACAACCTGGTGTACGCAGTCAAG
ACATGTACGTGGCGGGAAACGGACGCCAAGTATTTTTTCCCTTTGATGCT
GTCTGCCACGCTAGCAATCGACATGGTATGGTTGTGGTACGCCCTCCTCA
CACCACGTAGTGTTGAGTGTCGTACCGAAAAAAATGATGATACTGCAGCG
GACAAGGTCCAGGAAAAGATATCTGCCAGGCAAAGCAGCACTGTCAACCG
GTGGTACCTGGCCTTGAGTATAATAGGGCTATTGCGGGGCGTGGTATTTT
GGCGGGGGTACTCGCCCGTGGCAAACACCCTTTACTCGCTTGTACAATAC
AGTCGAATGAAAGGGCCGTCGAGTCTGAAGCGCAGCCAAAAATATGGGAG
TGGTATACCGCGCAAAGCTCACAAGATATACAAGTACGATTACGCCTCTC
TCCCCGAACGGGTCGCTGGGAATGCCGCGGAGGCATTGGGAAGAAGTACC
AATGAGGAGGCACAGATCCAGAAGCAACGGAAGAAAACCAACGTAATTCT
GTTGCTGAGCGAGAGCTTCGGCAACTCCTTGCTCAAAACAGAAGAGGGCT
TAGAGGCTTTCCCTTTCTATGAAAATGTTGTGCAGCGGGATCCTGATATT
TATGATTTCACAAATAATCGTGCAGTTTCGGGAAACACTCTTACAGCGGC
CTCAGCCGCCTTGGTTGGGTCCTATGTTGCCGCTCCTGATCTGCACCCCG
ACACGTGGACCTTCTTTGATCTGCCAAACCTGTTCACGCTGGGCAAGGCC
CTAGGCTACCGCCTTGTCCTCTTTATGCCATACGACCACGAGGATTGGTT
TCCTTTCACGGGGATATACGAGGACCGTTTCGATAAGATTGTGAGCAGGA
GCACATTGGGGGAGAGGGCGGTCAATGACATGGGAATGGATGACCGCCTG
GTGACGGCCGAGGTCCTTAAGTTTCTGGAGGAGGAGGGGGCCAAGCAAAG
GCGACACCGAGAGAAAGAACTGTTGAGAGAGCAGCGGGCATCCGAATGCC
AGGAGACGTATGGAGAGTGGCCGCACCATGACAGTCAGGTCGGCAAGGGG
GATGGCCCGCAGGAGGGGGAGCGGGAGCAGCAACACCATCAACGTAATGA
ACAAGAGGTGGGGTACACGGGCTCGGAATACCACGTCGAGAGTGAGCACG
ATCAGGAGAAGGGGGGCGTAGGGGAAGTGAGACGGCATCATGGCACCGAG
GCAAGCGAAAATGACGACGAAGAGGCTGAAAAATTCATACTCGTGGTGTT
TTGGAACCATCTGCACACACCTTTCCTTGTCAACGACGAAGCCAATCCAA
TAAATCAGACACTGCTGGACCTTACCCGTGCTTCCAATGCAAGGAAACAA
GATGAAACCACTACAATTGACGAATCCTCCGAGAAAAGGGCAGCAGCGTC
AGCCCCACCAAAGGCTCGTCCGAAGAAAACATTGGTGCCTCCCGAAGTAC
GAAGCTCCTCCTCTCTGGACGCACTGACTCGCCTGGGTATGAAGGAAGAC
CGGGCGGTCAGTGCCATGCAGATCGGGAACAAGATGATGCACGACGTGTA
CGACACCTTGCAATCCTCTGGCTTGCTGGAAAATACCCTCATTTCTTTCC
AGTCCGACCACGGGGAAACTGCCGGGCCGGTGGTGCGGAAACGTCTGGCA
GACCCGGACTCTCTCTATTTAGCCACGCCCCTCTGGATGCACATCCCTCC
CACATTGCTCACAGACACTCAACGTGCCACCCTCCGTGCCAACGGGGACA
GGTTAACGTCGAACATGGACGTGATGCCGACTTTTGTGGAGATCCTGGGT
TGGGAATCGGCCGACAGCATGTTCGACGGCGTACCGAGCATCTTCAAACA
CGGGGTCTCCTTGCTCCGCCCTGTCGAACACGATCGGGTCACCTCCGGGT
GGCAAGGCCCACCGTTTGTCGATTCCTGCGATTGGGCCCACGGCTTTGTC
TTCAATGCCTCGCATACCCTTATCTTGAGGGTACCCGACAATGACGCCGT
CTTGGAGGCATTAGACGAAGAGGATGGGACCTGGACTACAGTGAAACAGC
GCGTGCCTCTGAAGGACTTGCCCGGGGAAGAGCTGGCCTGGTGGATGCAA
GAGCTTCAGACGAACCATGCGGATATGATGAAGACGATGAAGGAGTGTTT
CTGGGATTATTTGTGGGAGAGTTGAGCTCGAACATCTAGTGCGTTTAGTT
AGTGGTAGCGGTATTCTCTAACGAGTGTTCAGGGACGAACACTTTTTTTT
TTTTCGTTTGTATATTTAGATGTATCATAGCAATTGTTGGGTTGCTAAAT
AGCGTTTCGATGCGATGTCATCGTATGTTGAAGCCTTATCACCTCCCAGA
GGCATTTGAGAAATGCAATTTGAAATTTGTAAGCATGGCTGCGTAAATGA
CAAAGCAAAACAAAAAATCGGCTGCTTGGACTTG back to topCoding sequence (CDS) from alignment at CM002455.1:1298441..1301274- >rna516 ID=rna516|Name=rna516|organism=Nannochloropsis gaditana|type=CDS|length=2574bp|location=Sequence derived from alignment at CM002455.1:1298441..1301274- (Nannochloropsis gaditana)
ATGATCACTTTCTCAAGGAGAGGGTCTCTCACTGAGAAAGGAAGTGCATA
TGTTGCCGTTGGAAGGATTGCTTCGGTTGCTTTGGTGGGACTGGGATTCA
CGCCTTTGCATCTCCTTTACCTTCATCTCCGTGGTAAAGCGCGGCGTCGA
AATTTGTTTGCGTGTCTCTTGGAGAATGTACTCGCTTACTTTCTATTGGT
ATCAAGCGTGCGGCACGTACTGCATGCCCCACCCGCCAAAACTCGACAGC
AGCAGCGGCGACAGGTTCTGGGGATCATATCGGCAGCAATCCTTGTCTTT
GCACATGCCTTCATTGTAGCCGCTCAAGTGACTGCGCTGGCCTTAATGGG
CTCGCGAATGAATGGAGACTTCATCTACAACCTGGTGTACGCAGTCAAGA
CATGTACGTGGCGGGAAACGGACGCCAAGTATTTTTTCCCTTTGATGCTG
TCTGCCACGCTAGCAATCGACATGGTATGGTTGTGGTACGCCCTCCTCAC
ACCACGTAGTGTTGAGTGTCGTACCGAAAAAAATGATGATACTGCAGCGG
ACAAGGTCCAGGAAAAGATATCTGCCAGGCAAAGCAGCACTGTCAACCGG
TGGTACCTGGCCTTGAGTATAATAGGGCTATTGCGGGGCGTGGTATTTTG
GCGGGGGTACTCGCCCGTGGCAAACACCCTTTACTCGCTTGTACAATACA
GTCGAATGAAAGGGCCGTCGAGTCTGAAGCGCAGCCAAAAATATGGGAGT
GGTATACCGCGCAAAGCTCACAAGATATACAAGTACGATTACGCCTCTCT
CCCCGAACGGGTCGCTGGGAATGCCGCGGAGGCATTGGGAAGAAGTACCA
ATGAGGAGGCACAGATCCAGAAGCAACGGAAGAAAACCAACGTAATTCTG
TTGCTGAGCGAGAGCTTCGGCAACTCCTTGCTCAAAACAGAAGAGGGCTT
AGAGGCTTTCCCTTTCTATGAAAATGTTGTGCAGCGGGATCCTGATATTT
ATGATTTCACAAATAATCGTGCAGTTTCGGGAAACACTCTTACAGCGGCC
TCAGCCGCCTTGGTTGGGTCCTATGTTGCCGCTCCTGATCTGCACCCCGA
CACGTGGACCTTCTTTGATCTGCCAAACCTGTTCACGCTGGGCAAGGCCC
TAGGCTACCGCCTTGTCCTCTTTATGCCATACGACCACGAGGATTGGTTT
CCTTTCACGGGGATATACGAGGACCGTTTCGATAAGATTGTGAGCAGGAG
CACATTGGGGGAGAGGGCGGTCAATGACATGGGAATGGATGACCGCCTGG
TGACGGCCGAGGTCCTTAAGTTTCTGGAGGAGGAGGGGGCCAAGCAAAGG
CGACACCGAGAGAAAGAACTGTTGAGAGAGCAGCGGGCATCCGAATGCCA
GGAGACGTATGGAGAGTGGCCGCACCATGACAGTCAGGTCGGCAAGGGGG
ATGGCCCGCAGGAGGGGGAGCGGGAGCAGCAACACCATCAACGTAATGAA
CAAGAGGTGGGGTACACGGGCTCGGAATACCACGTCGAGAGTGAGCACGA
TCAGGAGAAGGGGGGCGTAGGGGAAGTGAGACGGCATCATGGCACCGAGG
CAAGCGAAAATGACGACGAAGAGGCTGAAAAATTCATACTCGTGGTGTTT
TGGAACCATCTGCACACACCTTTCCTTGTCAACGACGAAGCCAATCCAAT
AAATCAGACACTGCTGGACCTTACCCGTGCTTCCAATGCAAGGAAACAAG
ATGAAACCACTACAATTGACGAATCCTCCGAGAAAAGGGCAGCAGCGTCA
GCCCCACCAAAGGCTCGTCCGAAGAAAACATTGGTGCCTCCCGAAGTACG
AAGCTCCTCCTCTCTGGACGCACTGACTCGCCTGGGTATGAAGGAAGACC
GGGCGGTCAGTGCCATGCAGATCGGGAACAAGATGATGCACGACGTGTAC
GACACCTTGCAATCCTCTGGCTTGCTGGAAAATACCCTCATTTCTTTCCA
GTCCGACCACGGGGAAACTGCCGGGCCGGTGGTGCGGAAACGTCTGGCAG
ACCCGGACTCTCTCTATTTAGCCACGCCCCTCTGGATGCACATCCCTCCC
ACATTGCTCACAGACACTCAACGTGCCACCCTCCGTGCCAACGGGGACAG
GTTAACGTCGAACATGGACGTGATGCCGACTTTTGTGGAGATCCTGGGTT
GGGAATCGGCCGACAGCATGTTCGACGGCGTACCGAGCATCTTCAAACAC
GGGGTCTCCTTGCTCCGCCCTGTCGAACACGATCGGGTCACCTCCGGGTG
GCAAGGCCCACCGTTTGTCGATTCCTGCGATTGGGCCCACGGCTTTGTCT
TCAATGCCTCGCATACCCTTATCTTGAGGGTACCCGACAATGACGCCGTC
TTGGAGGCATTAGACGAAGAGGATGGGACCTGGACTACAGTGAAACAGCG
CGTGCCTCTGAAGGACTTGCCCGGGGAAGAGCTGGCCTGGTGGATGCAAG
AGCTTCAGACGAACCATGCGGATATGATGAAGACGATGAAGGAGTGTTTC
TGGGATTATTTGTGGGAGAGTTGA back to top
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