EWM30144.1, cds516 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM30144.1 vs. NCBI_GenBank
Match: gi|585112800|gb|EWM30144.1| (hypothetical protein Naga_100115g2 [Nannochloropsis gaditana]) HSP 1 Score: 1785 bits (4622), Expect = 0.000e+0 Identity = 857/857 (100.00%), Postives = 857/857 (100.00%), Query Frame = 0
Query: 1 MITFSRRGSLTEKGSAYVAVGRIASVALVGLGFTPLHLLYLHLRGKARRRNLFACLLENVLAYFLLVSSVRHVLHAPPAKTRQQQRRQVLGIISAAILVFAHAFIVAAQVTALALMGSRMNGDFIYNLVYAVKTCTWRETDAKYFFPLMLSATLAIDMVWLWYALLTPRSVECRTEKNDDTAADKVQEKISARQSSTVNRWYLALSIIGLLRGVVFWRGYSPVANTLYSLVQYSRMKGPSSLKRSQKYGSGIPRKAHKIYKYDYASLPERVAGNAAEALGRSTNEEAQIQKQRKKTNVILLLSESFGNSLLKTEEGLEAFPFYENVVQRDPDIYDFTNNRAVSGNTLTAASAALVGSYVAAPDLHPDTWTFFDLPNLFTLGKALGYRLVLFMPYDHEDWFPFTGIYEDRFDKIVSRSTLGERAVNDMGMDDRLVTAEVLKFLEEEGAKQRRHREKELLREQRASECQETYGEWPHHDSQVGKGDGPQEGEREQQHHQRNEQEVGYTGSEYHVESEHDQEKGGVGEVRRHHGTEASENDDEEAEKFILVVFWNHLHTPFLVNDEANPINQTLLDLTRASNARKQDETTTIDESSEKRAAASAPPKARPKKTLVPPEVRSSSSLDALTRLGMKEDRAVSAMQIGNKMMHDVYDTLQSSGLLENTLISFQSDHGETAGPVVRKRLADPDSLYLATPLWMHIPPTLLTDTQRATLRANGDRLTSNMDVMPTFVEILGWESADSMFDGVPSIFKHGVSLLRPVEHDRVTSGWQGPPFVDSCDWAHGFVFNASHTLILRVPDNDAVLEALDEEDGTWTTVKQRVPLKDLPGEELAWWMQELQTNHADMMKTMKECFWDYLWES 857
MITFSRRGSLTEKGSAYVAVGRIASVALVGLGFTPLHLLYLHLRGKARRRNLFACLLENVLAYFLLVSSVRHVLHAPPAKTRQQQRRQVLGIISAAILVFAHAFIVAAQVTALALMGSRMNGDFIYNLVYAVKTCTWRETDAKYFFPLMLSATLAIDMVWLWYALLTPRSVECRTEKNDDTAADKVQEKISARQSSTVNRWYLALSIIGLLRGVVFWRGYSPVANTLYSLVQYSRMKGPSSLKRSQKYGSGIPRKAHKIYKYDYASLPERVAGNAAEALGRSTNEEAQIQKQRKKTNVILLLSESFGNSLLKTEEGLEAFPFYENVVQRDPDIYDFTNNRAVSGNTLTAASAALVGSYVAAPDLHPDTWTFFDLPNLFTLGKALGYRLVLFMPYDHEDWFPFTGIYEDRFDKIVSRSTLGERAVNDMGMDDRLVTAEVLKFLEEEGAKQRRHREKELLREQRASECQETYGEWPHHDSQVGKGDGPQEGEREQQHHQRNEQEVGYTGSEYHVESEHDQEKGGVGEVRRHHGTEASENDDEEAEKFILVVFWNHLHTPFLVNDEANPINQTLLDLTRASNARKQDETTTIDESSEKRAAASAPPKARPKKTLVPPEVRSSSSLDALTRLGMKEDRAVSAMQIGNKMMHDVYDTLQSSGLLENTLISFQSDHGETAGPVVRKRLADPDSLYLATPLWMHIPPTLLTDTQRATLRANGDRLTSNMDVMPTFVEILGWESADSMFDGVPSIFKHGVSLLRPVEHDRVTSGWQGPPFVDSCDWAHGFVFNASHTLILRVPDNDAVLEALDEEDGTWTTVKQRVPLKDLPGEELAWWMQELQTNHADMMKTMKECFWDYLWES
Sbjct: 1 MITFSRRGSLTEKGSAYVAVGRIASVALVGLGFTPLHLLYLHLRGKARRRNLFACLLENVLAYFLLVSSVRHVLHAPPAKTRQQQRRQVLGIISAAILVFAHAFIVAAQVTALALMGSRMNGDFIYNLVYAVKTCTWRETDAKYFFPLMLSATLAIDMVWLWYALLTPRSVECRTEKNDDTAADKVQEKISARQSSTVNRWYLALSIIGLLRGVVFWRGYSPVANTLYSLVQYSRMKGPSSLKRSQKYGSGIPRKAHKIYKYDYASLPERVAGNAAEALGRSTNEEAQIQKQRKKTNVILLLSESFGNSLLKTEEGLEAFPFYENVVQRDPDIYDFTNNRAVSGNTLTAASAALVGSYVAAPDLHPDTWTFFDLPNLFTLGKALGYRLVLFMPYDHEDWFPFTGIYEDRFDKIVSRSTLGERAVNDMGMDDRLVTAEVLKFLEEEGAKQRRHREKELLREQRASECQETYGEWPHHDSQVGKGDGPQEGEREQQHHQRNEQEVGYTGSEYHVESEHDQEKGGVGEVRRHHGTEASENDDEEAEKFILVVFWNHLHTPFLVNDEANPINQTLLDLTRASNARKQDETTTIDESSEKRAAASAPPKARPKKTLVPPEVRSSSSLDALTRLGMKEDRAVSAMQIGNKMMHDVYDTLQSSGLLENTLISFQSDHGETAGPVVRKRLADPDSLYLATPLWMHIPPTLLTDTQRATLRANGDRLTSNMDVMPTFVEILGWESADSMFDGVPSIFKHGVSLLRPVEHDRVTSGWQGPPFVDSCDWAHGFVFNASHTLILRVPDNDAVLEALDEEDGTWTTVKQRVPLKDLPGEELAWWMQELQTNHADMMKTMKECFWDYLWES 857
BLAST of EWM30144.1 vs. NCBI_GenBank
Match: gi|514354400|ref|WP_016546120.1| (arylsulfatase [Leptospira wolffii] >gi|514175112|gb|EPG64833.1| arylsulfatase [Leptospira wolffii serovar Khorat str. Khorat-H2]) HSP 1 Score: 73.559 bits (179), Expect = 1.003e-9 Identity = 43/123 (34.96%), Postives = 69/123 (56.10%), Query Frame = 0
Query: 643 NKMMHDVYDTLQSSGLLENTLISFQSDHGETAGPVVRKRLADPDSLYLAT---PLWMHIPPTLLTDTQRATLRANGDRLTSNMDVMPTFVEILGWESADSMFDGVPSIFKHGVSLLRPVEHDR 762
+ ++ DVY L+ GLLENT++ F SDHGE+ + L DS Y+ T P+ ++IPP L LR N D+L +N D++PT +++L E+ ++ + + G SLLR + +R
Sbjct: 429 DSLLEDVYGYLKEEGLLENTVVLFTSDHGESLFE--HEYLGHIDSNYIETVSIPMLVYIPPVLQEKVNSQALRRNTDKLVANTDLIPTVIDLLDLETNSNVKNYTSHL--EGKSLLRDIYGNR 547
BLAST of EWM30144.1 vs. NCBI_GenBank
Match: gi|1197194948|ref|WP_086447707.1| (MULTISPECIES: sulfatase [Leptospira]) HSP 1 Score: 72.4034 bits (176), Expect = 1.999e-9 Identity = 50/153 (32.68%), Postives = 78/153 (50.98%), Query Frame = 0
Query: 613 PPEVRSSSSLDALTRLGMKEDRAVSAMQIGNKMMHDVYDTLQSSGLLENTLISFQSDHGETAGPVVRKRLADPDSLYL---ATPLWMHIPPTLLTDTQRATLRANGDRLTSNMDVMPTFVEILGWESADSMFDGVPSIFKHGVSLLRPVEHDR 762
P V S A+ + + D +V M + ++ DVY L+ G LENT++ F SDHGE+ L DS Y+ A P+ ++IP +L +R N D+ SN D++PTF++IL E+ ++ ++ G SLLR + DR
Sbjct: 403 PYIVPEDSRFFAVDSVPDQYDNSVRHM---DSLLEDVYAYLKKEGFLENTVVIFTSDHGESLFE--HDYLGHIDSNYVETVAIPMLLYIPNSLKESVNLQAIRRNTDKPVSNTDLIPTFIDILNLENNSAIKRYASNL--EGKSLLRDIYGDR 548
BLAST of EWM30144.1 vs. NCBI_GenBank
Match: gi|495870705|ref|WP_008595284.1| (sulfatase [Leptospira licerasiae] >gi|384117132|gb|EIE03389.1| arylsulfatase [Leptospira licerasiae serovar Varillal str. VAR 010] >gi|404273789|gb|EJZ41109.1| arylsulfatase [Leptospira licerasiae str. MMD4847]) HSP 1 Score: 71.2478 bits (173), Expect = 4.646e-9 Identity = 56/180 (31.11%), Postives = 88/180 (48.89%), Query Frame = 0
Query: 591 ESSEKRAAASAPPKARPKKTLVPPEVRSSSSLDALTRLGMKEDRAVSAMQIGNKMMHDVYDTLQSSGLLENTLISFQSDHGETAGPVVRKRLADPDSLYL---ATPLWMHIPPTLLTDTQRATLRANGDRLTSNMDVMPTFVEILGWESADSMFDGVPSIFKH-----GVSLLRPVEHDR 762
++S KR A +VP E S + A+ + + D +V M + ++ +VY L+ G LENT++ F SDHGE+ L DS Y+ A P+ ++IP +L +R N D+ +N D++PTF++IL E+ P+I K+ G SLLR + DR
Sbjct: 385 KTSGKRFAGVLHFNTNHFPYIVPEE----SKVFAVDSVPDQYDNSVRHM---DSLLEEVYAYLKKEGFLENTVVIFTSDHGESL--FEHDYLGHIDSNYVETVAVPMLLYIPNSLKESVNLQAIRRNTDKPVANTDLIPTFIDILNLENN-------PAIKKYSANLEGKSLLRDIYGDR 548
BLAST of EWM30144.1 vs. NCBI_GenBank
Match: gi|523631770|ref|WP_020769059.1| (arylsulfatase [Leptospira sp. B5-022] >gi|463335640|gb|EMK00333.1| arylsulfatase [Leptospira sp. B5-022]) HSP 1 Score: 69.707 bits (169), Expect = 1.562e-8 Identity = 54/180 (30.00%), Postives = 88/180 (48.89%), Query Frame = 0
Query: 591 ESSEKRAAASAPPKARPKKTLVPPEVRSSSSLDALTRLGMKEDRAVSAMQIGNKMMHDVYDTLQSSGLLENTLISFQSDHGETAGPVVRKRLADPDSLYLAT---PLWMHIPPTLLTDTQRATLRANGDRLTSNMDVMPTFVEILGWESADSMFDGVPSIFKH-----GVSLLRPVEHDR 762
++S+KR A +VP E S A+ + + D +V + + ++ DVY L+ G LENT++ F SDHGE+ L DS Y+ T P+ ++IP +L +R N ++ +N D++PTF++IL E+ P+I ++ G SLLR + DR
Sbjct: 385 KTSDKRFAGVLHLNTNHFPYIVPEE----SKFFAVDSVPDQYDNSVRHL---DSLLEDVYTYLKKEGFLENTVVIFTSDHGESL--FEHDYLGHIDSNYVETVSIPMLLYIPDSLKESVNLQAIRRNTEKPVANTDLIPTFIDILNLENN-------PAIKRYSANLEGRSLLRDIYGDR 548
BLAST of EWM30144.1 vs. NCBI_GenBank
Match: gi|1089020813|emb|SDX94070.1| (Methyltransferase domain-containing protein [Pseudomonas kuykendallii]) HSP 1 Score: 65.4698 bits (158), Expect = 3.915e-7 Identity = 36/105 (34.29%), Postives = 58/105 (55.24%), Query Frame = 0
Query: 636 VSAMQIGNKMMHDVYDTLQSSGLLENTLISFQSDHGETAGPVVRK-------RLADPDSLYLATPLWMHIPPTLLTDTQRATLRANGDRLTSNMDVMPTFVEILG 733
+ A+++ + + ++ D L +SG L+NTLI+F +DHGET R+ RL D L+ P W+ P L D Q LRAN + S++D+ PT +++ G
Sbjct: 384 LDALRLFDTCLGELLDCLSASGQLDNTLIAFTADHGETPERYDRQQARRMPLRLDQLDLDNLSVPFWLRWPANALDDAQCRQLRANVEVTVSHIDLYPTLLQLFG 488 The following BLAST results are available for this feature:
BLAST of EWM30144.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 6
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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