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Properties
| Property Name | Value |
|---|
| Product | ribosomal protein s3a |
| Orig transcript id | gnl|cribi|Naga_100032g3.249.mrna |
| Orig protein id | gnl|cribi|Naga_100032g3.249 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002465.1 | supercontig | CM002465.1:273697..276228 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna5153 ID=rna5153|Name=rna5153|organism=Nannochloropsis gaditana|type=mRNA|length=1232bp
GGGTACCCGTGCTGGCATCATTTTGTCCGAACCAGGAAATCCGGCGTACC
GACCCGGTGGTCATCATGGGAGTAATCCTGGACTTTGTATGCCTTGTCGC
ACCGACCACGACAGAGGAATGTTGACGAAAATCAACCGGCGTCCGAGTGG
CTTCGTGAACGCATCTTCTTCGCTGACCCAATGCTTCGTATTCAATCAGA
CCTTTGATTTTAACCAATGAGGAATTTCAAATGAGCCGGCAGTTCTAAAT
GTGAACTCTAGGTTCCTAGGGAGACTTGCTCGGGGAGAAATCCTGGGAAC
TTTCTTTTTGCCTGTAAAACCACATCGCGTTCTCCCCTTGATTGCGCCCG
ACCTAACAAGCGCATAGATTCCAACAGACAAACCAATAAAATATAAAATA
TAGGTCTTACAGGCGTCTTCAAATCATTCTTGTACAGGGGATTTCCATGT
TCGGTTTTAAAAATAAAGCTGCGAAGGAAGCTGCGGTAGTCGTGTCATCC
CCATCTGTGTGGGGGCACTGCGATAATTTGGCTCCACCTCTGGTGGCAAC
CCCATTGAGAGCCATACTTTGGTGCCTCGCACTCACATTTCTGCCGCATA
TTCTGCGAATACCCATGGTTTTGAAGCTTAAAGGATGGTACAACCACCTG
ATGCCTCGAACTCATCAGTTCAACGAGCGTGACACCCAGCAAAACCCCGA
GCTTGTGCGGATGATCCAGCGAACAACTGCCGCACATGCGAACAGCTGGG
AGGCCTTTACCTACTTTTCTGTGGCCTGCATCGTGGCGCATGTCCTAAAA
CTGAAGGAGGAAATCGCCTCGAGACTCTGTACGCTATTTTTGGGGCTTCG
CTTCTGTTACATCCTACTGTACATAGGAGGCACGCAAGCATGGGTGGGGA
CCCTACGCTCGCTCGTGTGGTTCGCTGCTTTCGTAGCGGCCTGGCGGCTG
ATATTGCTGTCGCTGAGCCAAGCGGGACTCTGATGCCGGGATTGAAATGT
AGTGAGTAGGGTGGATGAAGGGAGTGTGCGGTGTGGACATGTCTGAGACC
AGTCAAGCCACAAAAGAGAACAAGGGATGCGACATGATTTTCGCACAGAA
CTACATCAAATTGTTGTGAATGAAGCTTCGAATGTGACAGGGCTTATAAA
TGAACACTGAGAGAAAGAGATCCGGCCAGGGACGATAAGCAAAGAAAAAT
GTGCTCGATGCACACGGGCACGTTTGAGTTCC back to topprotein sequence of rna5153 >rna5153-protein ID=rna5153-protein|Name=rna5153|organism=Nannochloropsis gaditana|type=polypeptide|length=266bp
MAVGKNQKKVSKGRKGGKKKIVDPFLKKEWYDIKAPGYFKTRKVGKTLIT
RTTGTKIASEGLKGRVFEVNLAELQGGDEEQGYRKFQLVAEDVKGTDILT
NFHGMDLTREKLNSLIKKWQTLIDAHVEAKTTDGYTLRLFAVAFTKRVPG
QVSKAAHAQAAQVRAIRKKIVDIIKEKVVNNDLKELVKLFIPEQIGREIE
RATKGIFPLSVVYLRKVKVLKKPKFDLVKLMEIHEGTTPVDETGAGVDRP
EEPALVPEVAGSGGRL back to topmRNA from alignment at CM002465.1:273697..276228- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna5153 ID=rna5153|Name=rna5153|organism=Nannochloropsis gaditana|type=mRNA|length=2532bp|location=Sequence derived from alignment at CM002465.1:273697..276228- (Nannochloropsis gaditana)
CAGGGGCTTGGTTTTGGCATGAACAGAAGTTCGCCGGGGAAGTTTACGTC
CTGGTGTCTGGAATGGTACCCATGTGGTGCGCTTCTCCTTCAAATGCCTT
GTGGTTGGCATGCATACTTGGGGGTGATGGATGGAACTGCTTTGTGACTA
CCCGGTCTCGACGAATGGTGGGAGGCGGAACGCCGTACATCAGACGCTCG
CACAGCACCCTCTGTCTTTGTCATACCACAGTCGCACTGGCCGCTAAAAT
GTTGCCTACCACGTATTGTTTGGAAGGAATACATGACCCTCTAGACCAAT
TTGGGTGTTAAAAAGATTTCTACCGGGCACCAAGCCCCTCCTCCACCACC
CAGAAGAACGGAGAAAGTGAGGACTCTGCTACAGGGTGTCGTGTTAGACT
ACATGGATGGTTTATTTCCTCTTAAATCTCATGTATACATTTCTCCTACA
TACACTGATTTCATAGGCCACATTCGTCTAGGGCGCCTTCTATAGGGAAA
GCTATGGCTGTCGGTAAGGAACTACGCGAGGGGCCGGAGGGGCGGAAAGA
GGACTGGGACAAGACGCACTGTTCTCGGACGACCCCGGTTTAGAGACCCA
TGAGAGATCCGAATCGCGTGTGAAGACTTTCGCGTATGTTCGTCTCTGCA
TTTCTGCCCGACTGAAATAGCAGGGCGGTCTGACCTCCCCCCCCCCCTTT
AACAGGCAAGAATCAAAAAAAAGTGTCGAAGGGCCGCAAGGGCGGCAAGA
AGAAGATGTACGTACTCTCAGCTATCCACTCATACGTGGCTTGTCGGAGA
AATTGACGGCTGCATTGGCCGAGAGAGACCACAACCCTGCTCCCTCGTCT
CACGCGCCGTGTCATTCCTTTTCCCCTCCTGGTCTCGGCACAGCGTGGAC
CCCTTCCTGAAGAAGGAATGGTACGACATCAAGGCCCCTGGGTACTTCAA
AACGCGCAAGGTGGGCAAGACCCTGATCACGCGTACCACAGGCACGAAGA
TCGCCTCGGAGGGCTTGAAGGGCCGCGTCTTCGAGGTGAACCTGGCTGAG
TTGCAAGGCGGGGACGAAGAGCAAGGGTACCGGAAGTTTCAGTTGGTGGC
AGAGGATGTGAAAGGAACCGATATCTTGACAAATTTCCACGGCATGGACT
TGACAAGGTGCGGGGGCAACGAAGGGAAGGGAGGAGGGAGGGGAGGAGGG
GTGTATGTGGAGAGGGAGCTGGCCAGGCGGGGGGGCCAGGCGGGGGGGGT
GACGGGGTACTCGAATCACACGCAAGCAACAAGCCGATGGGCATGCCCCT
TCTGACCACCTTTCCCCTTATTCCTCCGCTTCCACCCAGGGAGAAGTTGA
ACTCCCTGATCAAGAAGTGGCAGACCCTGATCGACGCCCACGTGGAGGCC
AAGACCACCGACGGCTACACTCTCCGCCTCTTCGCCGTGGCGTTCACCAA
GCGGGTGCCCGGCCAGGTCTCTAAAGCCGCCCACGCCCAGGCGGCACAGG
TGCGGGCGATCCGGAAGAAGATCGTGGACATCATTAAGGAGAAGGTGGTG
AACAACGATTTGAAGGAGCTAGTCAAGCTTTTGTGAGTACTGGAGGGCGG
GAGGGGGGGGGAAAGGGAGGAAAGTAGATGGGGAGGATCTCGCCGACTTT
TGTCTGCGCATTTTGGGCGAGTGGACGGCCCTTTGGGCGTCAAGAACTAG
TACAGGTATTGCAGTCCTTATGCCACGGAGCCCCGGCGAGCCTATCGCTG
GGCCATGGAAATTCGAATCAAACTCCTGCTCTGCCTAGTGACTGCATAGA
TCGACAGTATAGATCCCTCATAGGAACCTCTATGTAAGAAGCCCCGCGGG
GCAGCATGCGCAGTGAGGGCTGAAGAAGGATCACATCACACGCCTCGTGT
GCATTGCTTTGCCTGCCGCGAAGGTGCCAAAGCCACCGCATCTGCAGGCA
TTGGCCATCCAATGCCCACAGGTCGTGTCACGCTCATCGAGGCGCTCATT
TTCCTCTCCCTTTCTCTCATGCTCCCCCTTCTCCCCGTGTCGGCAGCATC
CCGGAACAGATCGGCCGGGAGATCGAGCGGGCCACCAAGGGCATCTTCCC
TCTCTCCGTGGTCTACCTGCGCAAGGTGAAGGTTTTAAAGAAGCCCAAAT
TCGACCTGGTCAAGCTGATGGAGATCCACGAGGGCACGACCCCAGTGGAT
GAAACTGGCGCGGGGGTGGACAGGCCAGAGGAGCCTGCGTTAGTGCCCGA
GGTAGCGGGTTCAGGAGGACGACTTTGAGGGCGTGACGGCACGGAAAGGG
GGAGGGATGGGATCGGGAAGATAGGCGTTGCAGTAGGTGTGCCTGCGCGT
GCAGCGTTGGGGCGAGAGCGAGGGGGGAGAGGAGCCCCCGGGACCGTGGG
TCGTGCGGGTGAGTTACCGACTTACACCGTCACCTGGAGGCACAGAGAGG
TAGCATGAGCGCTTGGAAGAAAATCCCATAACTCAAAACCGAGAAGATGG
AACACAAAAACAGCAACATGGAACTCAAACGT back to topCoding sequence (CDS) from alignment at CM002465.1:273697..276228- >rna5153 ID=rna5153|Name=rna5153|organism=Nannochloropsis gaditana|type=CDS|length=4005bp|location=Sequence derived from alignment at CM002465.1:273697..276228- (Nannochloropsis gaditana)
CATCCCGGAACAGATCGGCCGGGAGATCGAGCGGGCCACCAAGGGCATCT
TCCCTCTCTCCGTGGTCTACCTGCGCAAGGTGAAGGTTTTAAAGAAGCCC
AAATTCGACCTGGTCAAGCTGATGGAGATCCACGAGGGCACGACCCCAGT
GGATGAAACTGGCGCGGGGGTGGACAGGCCAGAGGAGCCTGCGTTAGTGC
CCGAGGTAGCGGGTTCAGGAGGACGACTTTGAGGAGAAGTTGAACTCCCT
GATCAAGAAGTGGCAGACCCTGATCGACGCCCACGTGGAGGCCAAGACCA
CCGACGGCTACACTCTCCGCCTCTTCGCCGTGGCGTTCACCAAGCGGGTG
CCCGGCCAGGTCTCTAAAGCCGCCCACGCCCAGGCGGCACAGGTGCGGGC
GATCCGGAAGAAGATCGTGGACATCATTAAGGAGAAGGTGGTGAACAACG
ATTTGAAGGAGCTAGTCAAGCTTTTCGTGGACCCCTTCCTGAAGAAGGAA
TGGTACGACATCAAGGCCCCTGGGTACTTCAAAACGCGCAAGGTGGGCAA
GACCCTGATCACGCGTACCACAGGCACGAAGATCGCCTCGGAGGGCTTGA
AGGGCCGCGTCTTCGAGGTGAACCTGGCTGAGTTGCAAGGCGGGGACGAA
GAGCAAGGGTACCGGAAGTTTCAGTTGGTGGCAGAGGATGTGAAAGGAAC
CGATATCTTGACAAATTTCCACGGCATGGACTTGACAAGGCAAGAATCAA
AAAAAAGTGTCGAAGGGCCGCAAGGGCGGCAAGAAGAAGATATGGCTGTC
GCATCCCGGAACAGATCGGCCGGGAGATCGAGCGGGCCACCAAGGGCATC
TTCCCTCTCTCCGTGGTCTACCTGCGCAAGGTGAAGGTTTTAAAGAAGCC
CAAATTCGACCTGGTCAAGCTGATGGAGATCCACGAGGGCACGACCCCAG
TGGATGAAACTGGCGCGGGGGTGGACAGGCCAGAGGAGCCTGCGTTAGTG
CCCGAGGTAGCGGGTTCAGGAGGACGACTTTGAGGAGAAGTTGAACTCCC
TGATCAAGAAGTGGCAGACCCTGATCGACGCCCACGTGGAGGCCAAGACC
ACCGACGGCTACACTCTCCGCCTCTTCGCCGTGGCGTTCACCAAGCGGGT
GCCCGGCCAGGTCTCTAAAGCCGCCCACGCCCAGGCGGCACAGGTGCGGG
CGATCCGGAAGAAGATCGTGGACATCATTAAGGAGAAGGTGGTGAACAAC
GATTTGAAGGAGCTAGTCAAGCTTTTCGTGGACCCCTTCCTGAAGAAGGA
ATGGTACGACATCAAGGCCCCTGGGTACTTCAAAACGCGCAAGGTGGGCA
AGACCCTGATCACGCGTACCACAGGCACGAAGATCGCCTCGGAGGGCTTG
AAGGGCCGCGTCTTCGAGGTGAACCTGGCTGAGTTGCAAGGCGGGGACGA
AGAGCAAGGGTACCGGAAGTTTCAGTTGGTGGCAGAGGATGTGAAAGGAA
CCGATATCTTGACAAATTTCCACGGCATGGACTTGACAAGGCAAGAATCA
AAAAAAAGTGTCGAAGGGCCGCAAGGGCGGCAAGAAGAAGATATGGCTGT
CGCATCCCGGAACAGATCGGCCGGGAGATCGAGCGGGCCACCAAGGGCAT
CTTCCCTCTCTCCGTGGTCTACCTGCGCAAGGTGAAGGTTTTAAAGAAGC
CCAAATTCGACCTGGTCAAGCTGATGGAGATCCACGAGGGCACGACCCCA
GTGGATGAAACTGGCGCGGGGGTGGACAGGCCAGAGGAGCCTGCGTTAGT
GCCCGAGGTAGCGGGTTCAGGAGGACGACTTTGAGGAGAAGTTGAACTCC
CTGATCAAGAAGTGGCAGACCCTGATCGACGCCCACGTGGAGGCCAAGAC
CACCGACGGCTACACTCTCCGCCTCTTCGCCGTGGCGTTCACCAAGCGGG
TGCCCGGCCAGGTCTCTAAAGCCGCCCACGCCCAGGCGGCACAGGTGCGG
GCGATCCGGAAGAAGATCGTGGACATCATTAAGGAGAAGGTGGTGAACAA
CGATTTGAAGGAGCTAGTCAAGCTTTTCGTGGACCCCTTCCTGAAGAAGG
AATGGTACGACATCAAGGCCCCTGGGTACTTCAAAACGCGCAAGGTGGGC
AAGACCCTGATCACGCGTACCACAGGCACGAAGATCGCCTCGGAGGGCTT
GAAGGGCCGCGTCTTCGAGGTGAACCTGGCTGAGTTGCAAGGCGGGGACG
AAGAGCAAGGGTACCGGAAGTTTCAGTTGGTGGCAGAGGATGTGAAAGGA
ACCGATATCTTGACAAATTTCCACGGCATGGACTTGACAAGGCAAGAATC
AAAAAAAAGTGTCGAAGGGCCGCAAGGGCGGCAAGAAGAAGATATGGCTG
TCGCATCCCGGAACAGATCGGCCGGGAGATCGAGCGGGCCACCAAGGGCA
TCTTCCCTCTCTCCGTGGTCTACCTGCGCAAGGTGAAGGTTTTAAAGAAG
CCCAAATTCGACCTGGTCAAGCTGATGGAGATCCACGAGGGCACGACCCC
AGTGGATGAAACTGGCGCGGGGGTGGACAGGCCAGAGGAGCCTGCGTTAG
TGCCCGAGGTAGCGGGTTCAGGAGGACGACTTTGAGGAGAAGTTGAACTC
CCTGATCAAGAAGTGGCAGACCCTGATCGACGCCCACGTGGAGGCCAAGA
CCACCGACGGCTACACTCTCCGCCTCTTCGCCGTGGCGTTCACCAAGCGG
GTGCCCGGCCAGGTCTCTAAAGCCGCCCACGCCCAGGCGGCACAGGTGCG
GGCGATCCGGAAGAAGATCGTGGACATCATTAAGGAGAAGGTGGTGAACA
ACGATTTGAAGGAGCTAGTCAAGCTTTTCGTGGACCCCTTCCTGAAGAAG
GAATGGTACGACATCAAGGCCCCTGGGTACTTCAAAACGCGCAAGGTGGG
CAAGACCCTGATCACGCGTACCACAGGCACGAAGATCGCCTCGGAGGGCT
TGAAGGGCCGCGTCTTCGAGGTGAACCTGGCTGAGTTGCAAGGCGGGGAC
GAAGAGCAAGGGTACCGGAAGTTTCAGTTGGTGGCAGAGGATGTGAAAGG
AACCGATATCTTGACAAATTTCCACGGCATGGACTTGACAAGGCAAGAAT
CAAAAAAAAGTGTCGAAGGGCCGCAAGGGCGGCAAGAAGAAGATATGGCT
GTCGCATCCCGGAACAGATCGGCCGGGAGATCGAGCGGGCCACCAAGGGC
ATCTTCCCTCTCTCCGTGGTCTACCTGCGCAAGGTGAAGGTTTTAAAGAA
GCCCAAATTCGACCTGGTCAAGCTGATGGAGATCCACGAGGGCACGACCC
CAGTGGATGAAACTGGCGCGGGGGTGGACAGGCCAGAGGAGCCTGCGTTA
GTGCCCGAGGTAGCGGGTTCAGGAGGACGACTTTGAGGAGAAGTTGAACT
CCCTGATCAAGAAGTGGCAGACCCTGATCGACGCCCACGTGGAGGCCAAG
ACCACCGACGGCTACACTCTCCGCCTCTTCGCCGTGGCGTTCACCAAGCG
GGTGCCCGGCCAGGTCTCTAAAGCCGCCCACGCCCAGGCGGCACAGGTGC
GGGCGATCCGGAAGAAGATCGTGGACATCATTAAGGAGAAGGTGGTGAAC
AACGATTTGAAGGAGCTAGTCAAGCTTTTCGTGGACCCCTTCCTGAAGAA
GGAATGGTACGACATCAAGGCCCCTGGGTACTTCAAAACGCGCAAGGTGG
GCAAGACCCTGATCACGCGTACCACAGGCACGAAGATCGCCTCGGAGGGC
TTGAAGGGCCGCGTCTTCGAGGTGAACCTGGCTGAGTTGCAAGGCGGGGA
CGAAGAGCAAGGGTACCGGAAGTTTCAGTTGGTGGCAGAGGATGTGAAAG
GAACCGATATCTTGACAAATTTCCACGGCATGGACTTGACAAGGCAAGAA
TCAAAAAAAAGTGTCGAAGGGCCGCAAGGGCGGCAAGAAGAAGATATGGC
TGTCG back to top
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