EWM25506.1, cds5141 (CDS) Nannochloropsis gaditana

Overview
NameEWM25506.1
Unique Namecds5141
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002465.1:275716..275725 -
Alignment locationCM002465.1:275472..275523 -
Alignment locationCM002465.1:275072..275335 -
Alignment locationCM002465.1:274647..274889 -
Alignment locationCM002465.1:273951..274182 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM25506.1
Productribosomal protein s3a
Orig transcript idgnl|cribi|Naga_100032g3.249.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002465.1supercontigCM002465.1:275716..275725 -
CM002465.1supercontigCM002465.1:275472..275523 -
CM002465.1supercontigCM002465.1:275072..275335 -
CM002465.1supercontigCM002465.1:274647..274889 -
CM002465.1supercontigCM002465.1:273951..274182 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Cellular Component
TermDefinition
GO:0005829cytosol
GO:0005622intracellular
GO:0005840ribosome
Vocabulary: Molecular Function
TermDefinition
GO:0005198structural molecule activity
GO:0003735structural constituent of ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Vocabulary: INTERPRO
TermDefinition
IPR027500Ribosomal_S1/3_euk
IPR001593Ribosomal_S3Ae
Homology
BLAST of EWM25506.1 vs. NCBI_GenBank
Match: gi|585107272|gb|EWM25506.1| (ribosomal protein s3a [Nannochloropsis gaditana])

HSP 1 Score: 531.946 bits (1369), Expect = 0.000e+0
Identity = 266/266 (100.00%), Postives = 266/266 (100.00%), Query Frame = 0
Query:    1 MAVGKNQKKVSKGRKGGKKKIVDPFLKKEWYDIKAPGYFKTRKVGKTLITRTTGTKIASEGLKGRVFEVNLAELQGGDEEQGYRKFQLVAEDVKGTDILTNFHGMDLTREKLNSLIKKWQTLIDAHVEAKTTDGYTLRLFAVAFTKRVPGQVSKAAHAQAAQVRAIRKKIVDIIKEKVVNNDLKELVKLFIPEQIGREIERATKGIFPLSVVYLRKVKVLKKPKFDLVKLMEIHEGTTPVDETGAGVDRPEEPALVPEVAGSGGRL 266
            MAVGKNQKKVSKGRKGGKKKIVDPFLKKEWYDIKAPGYFKTRKVGKTLITRTTGTKIASEGLKGRVFEVNLAELQGGDEEQGYRKFQLVAEDVKGTDILTNFHGMDLTREKLNSLIKKWQTLIDAHVEAKTTDGYTLRLFAVAFTKRVPGQVSKAAHAQAAQVRAIRKKIVDIIKEKVVNNDLKELVKLFIPEQIGREIERATKGIFPLSVVYLRKVKVLKKPKFDLVKLMEIHEGTTPVDETGAGVDRPEEPALVPEVAGSGGRL
Sbjct:    1 MAVGKNQKKVSKGRKGGKKKIVDPFLKKEWYDIKAPGYFKTRKVGKTLITRTTGTKIASEGLKGRVFEVNLAELQGGDEEQGYRKFQLVAEDVKGTDILTNFHGMDLTREKLNSLIKKWQTLIDAHVEAKTTDGYTLRLFAVAFTKRVPGQVSKAAHAQAAQVRAIRKKIVDIIKEKVVNNDLKELVKLFIPEQIGREIERATKGIFPLSVVYLRKVKVLKKPKFDLVKLMEIHEGTTPVDETGAGVDRPEEPALVPEVAGSGGRL 266          
BLAST of EWM25506.1 vs. NCBI_GenBank
Match: gi|301104382|ref|XP_002901276.1| (40S ribosomal protein S3a [Phytophthora infestans T30-4] >gi|262101210|gb|EEY59262.1| 40S ribosomal protein S3a [Phytophthora infestans T30-4])

HSP 1 Score: 314.694 bits (805), Expect = 3.868e-105
Identity = 163/266 (61.28%), Postives = 209/266 (78.57%), Query Frame = 0
Query:    1 MAVGKNQKKVSKGRKGGKKKIVDPFLKKEWYDIKAPGYFKTRKVGKTLITRTTGTKIASEGLKGRVFEVNLAELQGGDEEQGYRKFQLVAEDVKGTDILTNFHGMDLTREKLNSLIKKWQTLIDAHVEAKTTDGYTLRLFAVAFTKRVPGQVSKAAHAQAAQVRAIRKKIVDIIKEKVVNNDLKELVKLFIPEQIGREIERATKGIFPLSVVYLRKVKVLKKPKFDLVKLMEIHEGTTPVDETGAGVDRPEEPALVPEVAGSGGRL 266
            MAVGKN K+++KG+KGGKKK+VDPF +K+WYD+KAP  F  R  GKTL+ RT GTKIASEGL+GRVFEV LA+L   DE+Q +RK +L AE+++G+ I+T FHGMD TR+KL SLI+KWQTLI+A V+ KTTDGY +RLF +AFTK+ P Q+ K  +A+ AQ+RAIRKK+  I+ E+    D+K+L   F+PE IG+EIE+AT+GI+PL  VY+RK K+LKKPKFDLV+LME+HEG    +E GA V R EE  LV  +AGSGGRL
Sbjct:    1 MAVGKN-KRLTKGKKGGKKKVVDPFSRKDWYDVKAPAIFSERNCGKTLVNRTAGTKIASEGLRGRVFEVCLADLNK-DEDQAFRKIRLCAEEIQGSQIITGFHGMDFTRDKLCSLIRKWQTLIEAFVDVKTTDGYLVRLFCIAFTKKRPNQIKKTTYAKTAQIRAIRKKMTSIMTEEASKCDIKDLFLKFVPEIIGKEIEKATQGIYPLQNVYIRKCKILKKPKFDLVRLMELHEG--GAEEKGAKVAR-EEDQLVESMAGSGGRL 261          
BLAST of EWM25506.1 vs. NCBI_GenBank
Match: gi|813150485|ref|XP_012200889.1| (40S ribosomal protein S3a-2 [Saprolegnia parasitica CBS 223.65] >gi|641534502|gb|KDO28449.1| 40S ribosomal protein S3a-2 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 314.309 bits (804), Expect = 6.056e-105
Identity = 164/266 (61.65%), Postives = 208/266 (78.20%), Query Frame = 0
Query:    1 MAVGKNQKKVSKGRKGGKKKIVDPFLKKEWYDIKAPGYFKTRKVGKTLITRTTGTKIASEGLKGRVFEVNLAELQGGDEEQGYRKFQLVAEDVKGTDILTNFHGMDLTREKLNSLIKKWQTLIDAHVEAKTTDGYTLRLFAVAFTKRVPGQVSKAAHAQAAQVRAIRKKIVDIIKEKVVNNDLKELVKLFIPEQIGREIERATKGIFPLSVVYLRKVKVLKKPKFDLVKLMEIHEGTTPVDETGAGVDRPEEPALVPEVAGSGGRL 266
            MAVGKN K+++KG+KGGKKK VDPF +K+WYDI+ PG F+ R +GKTL+ RT+GTKIASEGLKGRVFEV LA+L   DE+Q +RK +L  EDV+GT ++T FHGMD TR+K+ SLIKKWQTLI+A V+ KTTDGYT+RLF +AFTK+ P Q+ K  +AQ AQ+RAIRKK+  I+ E+    DLK+L   FIPE IG+E+E+A +GIFPL   +LRK+KVLKKPKFD+ KLME+HE     +E GA V R +E  LV  +AG+GGRL
Sbjct:    1 MAVGKN-KRLTKGKKGGKKKAVDPFTRKDWYDIRVPGIFQQRTIGKTLVNRTSGTKIASEGLKGRVFEVCLADL-NKDEDQSFRKIRLCCEDVQGTQVVTGFHGMDFTRDKICSLIKKWQTLIEAFVDVKTTDGYTIRLFCIAFTKKRPNQIKKTCYAQTAQIRAIRKKMTTIMTEQASKCDLKDLYLKFIPEIIGKEVEKACQGIFPLQNCFLRKMKVLKKPKFDVTKLMELHE--EGAEEKGAKVVR-DEDLLVQSMAGTGGRL 261          
BLAST of EWM25506.1 vs. NCBI_GenBank
Match: gi|675182983|ref|XP_008900376.1| (40S ribosomal protein S3a [Phytophthora parasitica INRA-310] >gi|566031030|gb|ETI53941.1| 40S ribosomal protein S3a [Phytophthora parasitica P1569] >gi|567968675|gb|ETK93801.1| 40S ribosomal protein S3a [Phytophthora parasitica] >gi|567997105|gb|ETL47195.1| 40S ribosomal protein S3a [Phytophthora parasitica] >gi|568026301|gb|ETM00294.1| 40S ribosomal protein S3a [Phytophthora parasitica] >gi|568056791|gb|ETM53497.1| 40S ribosomal protein S3a [Phytophthora parasitica] >gi|568099382|gb|ETN14096.1| 40S ribosomal protein S3a [Phytophthora parasitica INRA-310] >gi|570334676|gb|ETO82624.1| 40S ribosomal protein S3a [Phytophthora parasitica P1976] >gi|570958770|gb|ETP23749.1| 40S ribosomal protein S3a [Phytophthora parasitica CJ01A1] >gi|570994662|gb|ETP51736.1| 40S ribosomal protein S3a [Phytophthora parasitica P10297] >gi|970656442|gb|KUF94454.1| 40S ribosomal protein S1 [Phytophthora nicotianae])

HSP 1 Score: 313.923 bits (803), Expect = 8.315e-105
Identity = 163/266 (61.28%), Postives = 208/266 (78.20%), Query Frame = 0
Query:    1 MAVGKNQKKVSKGRKGGKKKIVDPFLKKEWYDIKAPGYFKTRKVGKTLITRTTGTKIASEGLKGRVFEVNLAELQGGDEEQGYRKFQLVAEDVKGTDILTNFHGMDLTREKLNSLIKKWQTLIDAHVEAKTTDGYTLRLFAVAFTKRVPGQVSKAAHAQAAQVRAIRKKIVDIIKEKVVNNDLKELVKLFIPEQIGREIERATKGIFPLSVVYLRKVKVLKKPKFDLVKLMEIHEGTTPVDETGAGVDRPEEPALVPEVAGSGGRL 266
            MAVGKN K+++KG+KGGKKK+VDPF +K+WYD+KAP  F  R  GKTL+ RT GTKIASEGL+GRVFEV LA+L   DE+Q +RK +L AE+++G  I+T FHGMD TR+KL SLI+KWQTLI+A V+ KTTDGY +RLF +AFTK+ P Q+ K  +A+ AQ+RAIRKK+  I+ E+    D+K+L   F+PE IG+EIE+AT+GI+PL  VY+RK K+LKKPKFDLV+LME+HEG    +E GA V R EE  LV  +AGSGGRL
Sbjct:    1 MAVGKN-KRLTKGKKGGKKKVVDPFSRKDWYDVKAPAIFSERTCGKTLVNRTAGTKIASEGLRGRVFEVCLADLNK-DEDQAFRKIRLCAEEIQGNQIITGFHGMDFTRDKLCSLIRKWQTLIEAFVDVKTTDGYLVRLFCIAFTKKRPNQIKKTTYAKTAQIRAIRKKMTSIMTEEASKCDIKDLFLKFVPEIIGKEIEKATQGIYPLQNVYIRKCKILKKPKFDLVRLMELHEG--GAEEKGAKVAR-EEDQLVESMAGSGGRL 261          
BLAST of EWM25506.1 vs. NCBI_GenBank
Match: gi|1173946865|gb|OQR95348.1| (40S ribosomal protein S3a [Thraustotheca clavata])

HSP 1 Score: 313.923 bits (803), Expect = 9.480e-105
Identity = 164/266 (61.65%), Postives = 208/266 (78.20%), Query Frame = 0
Query:    1 MAVGKNQKKVSKGRKGGKKKIVDPFLKKEWYDIKAPGYFKTRKVGKTLITRTTGTKIASEGLKGRVFEVNLAELQGGDEEQGYRKFQLVAEDVKGTDILTNFHGMDLTREKLNSLIKKWQTLIDAHVEAKTTDGYTLRLFAVAFTKRVPGQVSKAAHAQAAQVRAIRKKIVDIIKEKVVNNDLKELVKLFIPEQIGREIERATKGIFPLSVVYLRKVKVLKKPKFDLVKLMEIHEGTTPVDETGAGVDRPEEPALVPEVAGSGGRL 266
            MAVGKN K+++KG+KGGKKK VDPF +K+WYDI+ PG F+ R +GKTL+ RT+GTKIASEGLKGRVFEV LA+L   DEEQ +RK +L  EDV+GT+++T FHGMD TR+K+ SLIKKWQTLI+A V+ KTTDGYT+RLF +AFTK+ P Q+ K  +AQ AQ+RAIRKK+  I+ E+    DLK+L   FIPE IG+E+E+A +GIFPL   ++RK+KVLKKPKFD+ KLME+HE      E GA V R E+  LV  +AG+GGRL
Sbjct:    1 MAVGKN-KRLTKGKKGGKKKAVDPFSRKDWYDIRVPGIFQQRTIGKTLVNRTSGTKIASEGLKGRVFEVCLADL-NKDEEQSFRKIRLCCEDVQGTNVVTGFHGMDFTRDKICSLIKKWQTLIEAFVDVKTTDGYTIRLFCIAFTKKRPNQIKKTCYAQTAQIRAIRKKMTTIMTEQASKCDLKDLYLKFIPEIIGKEVEKACQGIFPLQNCFVRKMKVLKKPKFDVTKLMELHEEGAA--EKGAKVVRDEDQ-LVESMAGAGGRL 261          
BLAST of EWM25506.1 vs. NCBI_GenBank
Match: gi|669168827|ref|XP_008619762.1| (40S ribosomal protein S3a-2 [Saprolegnia diclina VS20] >gi|530728618|gb|EQC26860.1| 40S ribosomal protein S3a-2 [Saprolegnia diclina VS20])

HSP 1 Score: 313.153 bits (801), Expect = 1.692e-104
Identity = 163/266 (61.28%), Postives = 208/266 (78.20%), Query Frame = 0
Query:    1 MAVGKNQKKVSKGRKGGKKKIVDPFLKKEWYDIKAPGYFKTRKVGKTLITRTTGTKIASEGLKGRVFEVNLAELQGGDEEQGYRKFQLVAEDVKGTDILTNFHGMDLTREKLNSLIKKWQTLIDAHVEAKTTDGYTLRLFAVAFTKRVPGQVSKAAHAQAAQVRAIRKKIVDIIKEKVVNNDLKELVKLFIPEQIGREIERATKGIFPLSVVYLRKVKVLKKPKFDLVKLMEIHEGTTPVDETGAGVDRPEEPALVPEVAGSGGRL 266
            MAVGKN K+++KG+KGGKKK VDPF +K+WYDI+ PG F+ R +GKTL+ RT+GTKIASEGLKGRVFEV LA+L   DE+Q +RK +L  EDV+GT ++T FHGMD TR+K+ SLIKKWQTLI+A V+ KTTDGYT+RLF +AFTK+ P Q+ K  +AQ AQ+RAIRKK+  I+ E+    DLK+L   FIPE IG+E+E+A +GIFPL   ++RK+KVLKKPKFD+ KLME+HE     +E GA V R +E  LV  +AG+GGRL
Sbjct:    1 MAVGKN-KRLTKGKKGGKKKAVDPFTRKDWYDIRVPGIFQQRTIGKTLVNRTSGTKIASEGLKGRVFEVCLADL-NKDEDQSFRKIRLCCEDVQGTQVVTGFHGMDFTRDKICSLIKKWQTLIEAFVDVKTTDGYTIRLFCIAFTKKRPNQIKKTCYAQTAQIRAIRKKMTTIMTEQASKCDLKDLYLKFIPEIIGKEVEKACQGIFPLQNCFVRKMKVLKKPKFDVTKLMELHE--EGAEEKGAKVVR-DEDLLVQSMAGTGGRL 261          
BLAST of EWM25506.1 vs. NCBI_GenBank
Match: gi|1173946286|gb|OQR94833.1| (40S ribosomal protein S3a [Achlya hypogyna])

HSP 1 Score: 312.768 bits (800), Expect = 2.016e-104
Identity = 163/266 (61.28%), Postives = 207/266 (77.82%), Query Frame = 0
Query:    1 MAVGKNQKKVSKGRKGGKKKIVDPFLKKEWYDIKAPGYFKTRKVGKTLITRTTGTKIASEGLKGRVFEVNLAELQGGDEEQGYRKFQLVAEDVKGTDILTNFHGMDLTREKLNSLIKKWQTLIDAHVEAKTTDGYTLRLFAVAFTKRVPGQVSKAAHAQAAQVRAIRKKIVDIIKEKVVNNDLKELVKLFIPEQIGREIERATKGIFPLSVVYLRKVKVLKKPKFDLVKLMEIHEGTTPVDETGAGVDRPEEPALVPEVAGSGGRL 266
            MAVGKN K+++KG+KGGKKK VDPF +K+WYDI+ PG F+ R +GKTL+ RT+GTKIASEGLKGRVFEV LA+L   DEEQ +RK +L  EDV+GT ++T FHGMD TR+K+ SLIKKWQTLI+A V+ KTTDGYT+RLF +AFTK+ P Q+ K  +AQ AQ+RAIRKK+  I+ E+    DLK+L   F+PE IG+E+E+A +GIFPL   ++RK+KVLKKPKFD+ KLME+HE      E GA V R E+  LV  +AG+GGRL
Sbjct:    1 MAVGKN-KRLTKGKKGGKKKAVDPFTRKDWYDIRVPGIFQQRTIGKTLVNRTSGTKIASEGLKGRVFEVCLADL-NKDEEQSFRKIRLCCEDVQGTQVVTGFHGMDFTRDKICSLIKKWQTLIEAFVDVKTTDGYTIRLFCIAFTKKRPNQIKKTCYAQTAQIRAIRKKMTTIMTEQASKCDLKDLYLKFVPEIIGKEVEKACQGIFPLQNCFVRKMKVLKKPKFDVTKLMELHEEGAA--EKGAKVVRDEDQ-LVQSMAGAGGRL 261          
BLAST of EWM25506.1 vs. NCBI_GenBank
Match: gi|823248801|ref|XP_012457052.1| (PREDICTED: 40S ribosomal protein S3a-like [Gossypium raimondii] >gi|763805323|gb|KJB72261.1| hypothetical protein B456_011G167500 [Gossypium raimondii])

HSP 1 Score: 312.383 bits (799), Expect = 3.805e-104
Identity = 159/265 (60.00%), Postives = 206/265 (77.74%), Query Frame = 0
Query:    1 MAVGKNQKKVSKGRKGGKKKIVDPFLKKEWYDIKAPGYFKTRKVGKTLITRTTGTKIASEGLKGRVFEVNLAELQGGDEEQGYRKFQLVAEDVKGTDILTNFHGMDLTREKLNSLIKKWQTLIDAHVEAKTTDGYTLRLFAVAFTKRVPGQVSKAAHAQAAQVRAIRKKIVDIIKEKVVNNDLKELVKLFIPEQIGREIERATKGIFPLSVVYLRKVKVLKKPKFDLVKLMEIHEGTTPVDETGAGVDRPEEPAL---VPEVAGS 262
            MAVGKN K++SKG+KGGKKK  DPF KK+WYDIKAP  F TR VGKTL+TRT GTKIASEGLK RVFEV+LA+LQGGDE+  YRK +L AEDV+G ++LTNF GM+ T +KL SL++KWQTLI+AHV+ KTTD YTLR+F + FTKR P QV +  +AQ++Q+R IR+K+ +I+  +  + DLKELV+ FIPE IG+EIE+AT  I+PL  V++RKVK+LK PKFDL KLME+H   +  ++ G  ++RP +  +    PEV G+
Sbjct:    1 MAVGKN-KRISKGKKGGKKKAADPFAKKDWYDIKAPSVFTTRNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQGGDEDHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWQTLIEAHVDVKTTDSYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMTAQATSCDLKELVQKFIPEMIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS--EDVGVKLERPADETMAESTPEVVGA 262          
BLAST of EWM25506.1 vs. NCBI_GenBank
Match: gi|953495343|emb|CEG43250.1| (40s ribosomal protein s3a [Plasmopara halstedii])

HSP 1 Score: 311.997 bits (798), Expect = 4.147e-104
Identity = 162/266 (60.90%), Postives = 208/266 (78.20%), Query Frame = 0
Query:    1 MAVGKNQKKVSKGRKGGKKKIVDPFLKKEWYDIKAPGYFKTRKVGKTLITRTTGTKIASEGLKGRVFEVNLAELQGGDEEQGYRKFQLVAEDVKGTDILTNFHGMDLTREKLNSLIKKWQTLIDAHVEAKTTDGYTLRLFAVAFTKRVPGQVSKAAHAQAAQVRAIRKKIVDIIKEKVVNNDLKELVKLFIPEQIGREIERATKGIFPLSVVYLRKVKVLKKPKFDLVKLMEIHEGTTPVDETGAGVDRPEEPALVPEVAGSGGRL 266
            MAVGKN K+++KG+KGGKKK+VDPF +K+WYDIKAP  F  R  GKTL+ RT GTKIASEGL+GRVFEV LA+L   DE+Q +RK +L AE+++G  I+T FHGMD TR+KL SLI+KWQTLI+A V+ KTTDGY +RLF +AFTK+ P Q+ K  +A+ AQ+RAIRKK+  I+ ++    D+K+L   F+PE IG+EIE+AT+GI+PL  VY+RK K+LKKPKFDLV+LME+HEG    +E GA V R +E  LV  +AGSGGRL
Sbjct:    1 MAVGKN-KRLTKGKKGGKKKVVDPFTRKDWYDIKAPAIFSERNCGKTLVNRTAGTKIASEGLRGRVFEVCLADL-NKDEDQAFRKIRLCAEEIQGNQIITGFHGMDFTRDKLCSLIRKWQTLIEAFVDVKTTDGYLVRLFCIAFTKKRPNQIKKTTYAKTAQIRAIRKKMTSIMTDEASKCDIKDLFLKFVPEIIGKEIEKATQGIYPLQNVYIRKCKILKKPKFDLVRLMELHEG--GAEEKGAKVVR-QEDQLVESMAGSGGRL 261          
BLAST of EWM25506.1 vs. NCBI_GenBank
Match: gi|1029078825|ref|XP_016699569.1| (PREDICTED: 40S ribosomal protein S3a-like [Gossypium hirsutum])

HSP 1 Score: 311.612 bits (797), Expect = 5.764e-104
Identity = 159/265 (60.00%), Postives = 206/265 (77.74%), Query Frame = 0
Query:    1 MAVGKNQKKVSKGRKGGKKKIVDPFLKKEWYDIKAPGYFKTRKVGKTLITRTTGTKIASEGLKGRVFEVNLAELQGGDEEQGYRKFQLVAEDVKGTDILTNFHGMDLTREKLNSLIKKWQTLIDAHVEAKTTDGYTLRLFAVAFTKRVPGQVSKAAHAQAAQVRAIRKKIVDIIKEKVVNNDLKELVKLFIPEQIGREIERATKGIFPLSVVYLRKVKVLKKPKFDLVKLMEIHEGTTPVDETGAGVDRPEEPAL---VPEVAGS 262
            MAVGKN K++SKG+KGGKKK  DPF KK+WYDIKAP  F TR VGKTL+TRT GTKIASEGLK RVFEV+LA+LQGGDE+  YRK +L AEDV+G ++LTNF GM+ T +KL SL++KWQTLI+AHV+ KTTD YTLR+F + FTKR P QV +  +AQ++Q+R IR+K+ +I+  +  + DLKELV+ FIPE IG+EIE+AT  I+PL  V++RKVK+LK PKFDL KLME+H   +  ++ G  ++RP +  +    PEV G+
Sbjct:    1 MAVGKN-KRISKGKKGGKKKAADPFAKKDWYDIKAPSVFTTRNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQGGDEDHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWQTLIEAHVDVKTTDSYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRQKMREIMTAQATSCDLKELVQKFIPEMIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS--EDVGVKLERPADETMAESTPEVVGA 262          
The following BLAST results are available for this feature:
BLAST of EWM25506.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585107272|gb|EWM25506.1|0.000e+0100.00ribosomal protein s3a [Nannochloropsis gaditana][more]
gi|301104382|ref|XP_002901276.1|3.868e-10561.2840S ribosomal protein S3a [Phytophthora infestans ... [more]
gi|813150485|ref|XP_012200889.1|6.056e-10561.6540S ribosomal protein S3a-2 [Saprolegnia parasitic... [more]
gi|675182983|ref|XP_008900376.1|8.315e-10561.2840S ribosomal protein S3a [Phytophthora parasitica... [more]
gi|1173946865|gb|OQR95348.1|9.480e-10561.6540S ribosomal protein S3a [Thraustotheca clavata][more]
gi|669168827|ref|XP_008619762.1|1.692e-10461.2840S ribosomal protein S3a-2 [Saprolegnia diclina V... [more]
gi|1173946286|gb|OQR94833.1|2.016e-10461.2840S ribosomal protein S3a [Achlya hypogyna][more]
gi|823248801|ref|XP_012457052.1|3.805e-10460.00PREDICTED: 40S ribosomal protein S3a-like [Gossypi... [more]
gi|953495343|emb|CEG43250.1|4.147e-10460.9040s ribosomal protein s3a [Plasmopara halstedii][more]
gi|1029078825|ref|XP_016699569.1|5.764e-10460.00PREDICTED: 40S ribosomal protein S3a-like [Gossypi... [more]
back to top
Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna5153rna5153Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications