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Properties
| Property Name | Value |
|---|
| Product | dnase domain containing 3 |
| Orig transcript id | gnl|cribi|Naga_100130g3.10554.mrna |
| Orig protein id | gnl|cribi|Naga_100130g3.10554 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002465.1 | supercontig | CM002465.1:233497..235194 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna5139 ID=rna5139|Name=rna5139|organism=Nannochloropsis gaditana|type=mRNA|length=3886bp
CGTAGGACTTCAGCAGCCAAAGGAGGGTGGAAAGGAGCAGCATGCTTTTT
CCTTTTTCAATCCTTGAGGGGATGGAGTCACGGCAATGCCTTTGAGAGGA
AATATGAAAGACATGAAGTAGCGTCCCAATGCAAAAAGCCGAGCCTCCTT
TTGCCCCCATAGCCGATTTCCACTTTTCCCTTTCCTCTTCTGCTTCCTCC
TCTCCCAATTCATCGTACTCTTCGACGCTCTCATTGCCTGCAGCCTCCTC
CCTGCTTCCTCATGTGGCGTCGTCAGGATTTCTATCCTCGCCATCGAAAT
TCTATGACAGTGAGAGCGCCGACGACCAAGACGTTCTGCACGAGGTGGAA
GACGGCTTCGCCCGGCAAATGGACGCCCTCGAGCGCATACACAAGCCCTC
CATAGTTCCTGGATTCAGACGCACAGAGGCGCCTTTTACGGTGGCTGACG
CGGCAGTGGACGGGACAGGCCATGCGACTGGATCTCGGCAGCCCTCCCAC
ACCCCGCCAGCAAACGAAGCAGGGGAAACTGCGGCAACAAGAAAGCCTGC
AACAGAGTGGGGAAATAGAAAAGTCTTGGAGGGAGGACATGGCGCGCAAG
GGACCGCGGGAACTAATGTGCAGGTCCCACCAATTTCTGATGACTCGGAC
GACAGCGCCCCGGGCGACCATGCCTCCCGCAGTAGCCCATTCCAAGGTAA
ACGCCGCACTCTCCACTCCCTCCGGCTACGCACCGGCCGAGCCTTGACGC
GGCGTCGCCGATTTATGTGCTTGGACGGCTTTGCGCAGTCCACGGCAATG
CGGCGCACGCTCCGTTGCTGGCGGGGACGGGGCTTGCAAGCCTGGTACGA
AAAGACGGCAATTGCCTGGGCCGACGCGCGAAGGCAACGGCGTGCGCTCC
GTTGGTGGTGGGAAACGATCAAGCACGGGGAGAAGGAGCAGCGGGAGGCG
GAGGCATTGGCGGGGACGCGGCATGCTCTTTCTGTGATGTTCAGGTGTTG
GAAACGGTGGAAGACGAGGCACAGGCAACATCGACAACACGAAGCAGCGG
AGCAGGCAAGGGCGAAGGAAGAGGGCCGGACAGCGGACATGGAAGCATGG
AGGCGTCGGCGACAAGTCCGGCGGGGGCTCGCGTGTCTTAAGGAGGGGGC
CCAGCGTTATCGCAAGATGCTTCAAGGCCAGGCTTGGGGACGGGACAGAC
AGGTGCTGCACGGATGGATGGCGCTCCTGCGCGCGGGTGCAGCCTGGCGG
CAGTGGCGAGCGACGGAGGTTTACCTGGGGGAAGTGGGAATGATGGCGTG
CTGTGTGGGGAGGGCCACGCGGGCCGTAAGACAATGGCAGATATGGGCCG
AGGAGCACGTGAGGGCCCGCGAGAGGGTGGAAGCTGGAGATACCGGGTGG
CAGAAGCAGCAGTTGGAGAGCTCAGTGGCTGCCTGGCGCGCGTGGACGCA
GTCGAAGGGGTGCCAGGGCCGGAAAAGGCGGGAAAGTAACGCATGGTGGT
ACCTGTGGCAGATACATCGGGCATTCCATCGATGGCGAGGGCGAACGGGA
GGAAGCCGTCAAGGGAGGCGGGCGACGGAGTGGAGGCTCTCGCGCGGGTG
GCGGGTCTGGAGGAAGTGGACAGCAGGACGGCAAGAAGCGAAGAGGGTGC
GGATGGAGTGGGAGGAGGCGTGCTGGCGGCGGAAGGTTTGCCAGGCGCTG
CGGGTGTGGGAAGGGCTGGTGAGGAGGAAGAAAGAGGAGAGAGACCGGGG
CAGGCGCACGCTGGCATGGAAATGCAGCCGAGGCCAAGACCGATGCCTGC
AACGGTGGGCGCGACGGACGATGGCAGACATGTGGCAAAGGGCAAAGGTG
GAGTGTGGCCAGCAAGCCTACGGGAAGCGAGGGGAGGCAAAGGGATGGGA
AGCTTGGTCTATGGGAACTCAGAGCTTGAAAGCCTTCCACGAGCAAGAGG
AGCGGGCTGGTCGCCTGTGGGCTCACCGACAAGTCTCATGGGCTCTGCGA
AAATGGACCTGTGGTGCCTGGGAGCTTGGAGAGCAACGACGCCGGGCGTG
GGAAAGAGGAAGGGAGGCGATGTGGCAGTGGAAAGAAAGGCGGGAAGCTG
GGGCGTGGCGAGCCTGGAAAATATGGGCCGCCCGGCACCGACTCGAGCGA
GCAAGACGGGTACAGCAGCAGGCGGAGGCACGACAGGCCAAGCTTGTGGA
GGCTGCCACGTCGTGGTGGAGGGGGGCCTCCACTGGGGCTAAGGTGTGCA
CTTGGAGAACGTGCGCTGTGGGCATCAAAGGGCCAAAAGGACGACGACTT
TTACCCCCACCCCGACCGTGGACGGGAGAAGATATTCAAATAAGGCATCA
CGGGATCAGATCGGCTGGCGGGACGAGCTGGGGAGGGAGTGTTGACAATC
GTGTCCGGAACCCGCGCCTCGATACAGTGAGTTGGCAAGGCCCGATCCAC
GATCGCATCGAACGAGACGGCCGATCCTCGTTTGCTTCCTCCCTCCCCAT
CCCTCCCTTCTTGTCGAGCTCCAGTTCGGCCCATTTCACGCGCATAGGGC
CTCGTTGTCAGCCTCGGCGTCCTTTAGAGCTGATGCTGGAGTCCTATGGT
GTGCGTGTTCCGCCCTGGATCGCAGAGGAGTTGCGTACGCGGGAAGCGTC
GGCAGTTGACGAGGAAATTTCACAGACCTCCCACAGAGGAACGAGAAAAG
AGAGGAATGACCAGCTTTCGGCGTGCTCTTTTGTTCCTTCTGGTGGGAGG
ACAAGGAGCGTGGAGGACCGGCGCGGTGATCCGCCGGGCAAATCGATTAC
AACCCCCGCCCCACCCTTCTGCCCCCGCACGGACACTTTGGTGCCTACAG
CCCCTCGTGATGTGTCCTCGACAGTCGGATGCTCACCCTCGTTTCCTGGA
GTGGACGCTGTAGGCATCGAAGCGCTGGGCAAGAGTGGTCCCGACCTGGG
TGCCGGTGCACTCGTGGCGAGCGCACCAAAGTCCGGCATCGCCCTGCCTA
TGGAAGGGATGGAGAATGATGGAAGAAAACGAGAGAGGGGAGAGCGGGTG
GAAGGACTGGAAATGGATGCGGTCTCGACTCTCGTGTGGGAAAATGAAGG
GGGAGAGGATCGGGAACGGGACACTCTGGATGTGCAGGCCGGAGGGGGTG
GCGACGGGGACACGGAGGAGGATGTGGGCGCATGTGAAAATGCCGAAGAC
ATAGAGGGGGACGAATTGGACATCTTGGAGGCCCGTCTGAGAGGTTGGAT
GATGGAGCGTGAGCGATTCGAGCATGCGCGCAAGGAATTCGAGTCCCGAA
AGCAAGACAAACTCAAGCAGGAATCCCGGCAACAAGAGCCTCCTTCCTCC
GACTCCTCACTCTCCGCGGCCTCGCTCGACGTATCCTCCTCCCATCCTAT
GGTCCACCTCGACCGTCATACCTCTAACCGTCTCGAGGGCTCAGAAGACC
ACAACACGGAGGGCCACAACCCCAGTGACAGGACTCAAAGAAGGAATCGG
CGCCAAGAGGAACGGATGGAGGAGTTGCACGACGTGATGCGAGAGTATGA
AATGTGGCAGAAAAAGACAATGCCTTTGATCCAAGCTGTCTATGAGAGAG
TCCGTCGCAAGAAATTGCAACTTTCAGAAGGAAAGGAGACGACGATTGGA
AAGGTGAGTGGGGAAAGAGGCTTCGTGCAAGCGAAAACGTGATGCGTACA
GTCATGAATCATAAACAAGGTTGGAATGGTGGTGTACATAGAGACTGGTA
TGCAAAAGTCCAAGGGACACGCTTCTCCGGAATGTTGTCACGTCATGAAG
TGTTAAATGTCAAGGCAGCGTTCATGACTTACTTCAGCGTTCACTTAATA
AAAGTGATAAAGAAAGTACCGTTTTCATCATTATAT back to topprotein sequence of rna5139 >rna5139-protein ID=rna5139-protein|Name=rna5139|organism=Nannochloropsis gaditana|type=polypeptide|length=289bp
MFDVHAHLTAQELLPDLDRLLTEAYSVGVRDIVVVSENVRDAALVLNLPP
CQNGVRLHKSLGLHPEHACLKSLSTVLNLIRENHTKLACVGEIGLDFSPH
ILGHDDAEAVKALQRECMRQQVELAYELDLPVNVHSRGAGHHALSLLRET
VSASSVADTLKTTERASSQTRARMYEGRVRAVMHAWDGKAKYAAAAAADS
QQSIYFSVPPCASRSPVMIKWIERLPLESLLLETDCPALAAVKGEVNVPR
NLQLSLQVIGARKGVGLDIVREITRKNAEELFGLQAGKE back to topmRNA from alignment at CM002465.1:233497..235194- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna5139 ID=rna5139|Name=rna5139|organism=Nannochloropsis gaditana|type=mRNA|length=1698bp|location=Sequence derived from alignment at CM002465.1:233497..235194- (Nannochloropsis gaditana)
TTCACAGATAATTGGACAACCACTAAAAACCATCCTTCCCTACTTTTTAT
ACTTTCGCGGACGTAAGCTTGGCTGATTTCTGCCTTCAAAGTTGGTGATC
ATAGATCTTGCTTTATACGATCCATTCTCGGCCGTGCGAGCGGTCTCGGA
CACATAATGCCAAGCTATTGAGTCATACGCACCACCACCGCCCGCAGAGT
CCCGAAACCCACTATGGTAATACTACTGGCGCGATTATGTTTGATGTGCA
CGCCCACTTGACTGCGCAAGAATTATTGCCGGATCTAGACAGATTATTGA
CGGAAGCGTATAGGTACGTGTATCAAGAGAAAGTACCGTAGCACTTTCCC
TCTCTTTCCTCTCTTCCTCCCTGGTCCATTTAAGACTCTATCCTATACAA
GAAGATGAAGGAAAGATCCGCAAATATCACAATGTAGCCATGTATGGAGC
TTGTTGAACAGAACGAAAGGCATTTTTCTCATTTAAGACCCAGTAAAGCC
TGGTAGCCCTGACACTCGATAACCCTTGAACACAGTGTCGGTGTCCGCGA
CATTGTGGTCGTCTCCGAGAATGTACGAGACGCAGCCTTGGTTCTAAACC
TGCCGCCTTGCCAAAACGGCGTCCGGCTGCATAAGTCGTTAGGTCTTCAT
CCTGAACATGCATGTCTAAAATCCTTGTCTACCGTGCTAAACCTCATCCG
AGAGAATCACACGAAGCTGGCCTGTGTGGGAGAAATCGGATTGGACTTCT
CTCCGCACATCTTGGGACATGATGATGCCGAGGCTGTCAAAGCATTGCAA
CGGGAGTGTATGAGACAACAAGTAGAGCTGGCATACGAACTTGATTTGCC
CGTAAACGTGCATTCCCGGGGAGCGGGGCACCACGCTTTGTCACTGCTGC
GAGAAACAGTGTCAGCATCAAGCGTTGCAGACACGCTAAAAACAACAGAG
AGAGCCAGTAGTCAAACAAGAGCTAGGATGTATGAAGGTCGGGTCCGCGC
CGTGATGCACGCATGGGACGGAAAGGCTAAATACGCAGCAGCGGCTGCTG
CAGATTCCCAACAAAGCATTTATTTTTCGGTTCCTCCCTGTGCGTCACGC
AGTCCTGTCATGATCAAGTGGATTGAACGCTTGCCATTGGAAAGTCTGTT
ACTGGAAACAGATTGTCCAGCTTTGGCGGCTGTGAAAGGAGAGGTCAACG
TGCCTCGAAATTTGCAGCTGTCATTGCAAGTCATAGGCGCACGTAAAGGA
GTAGGACTGGATATTGTCCGAGAGATCACGCGGAAAAATGCAGAGGAATT
GTTCGGTTTGCAAGCCGGGAAGGAATGAAGTGAAGAAATTTGTCAATCCC
TTGAAAGGAAACGTTCTGGGCGACCTGATAATATGGCAACATGGCTACAA
AAAAGATACTTTGACAGTATCTTACTGTTTCAGACCTTGTAAAAAAAAAG
GATTCTTGAAGAAGGCCGCATCAAAATCAATTAGACCGCTGTGCATCAGG
TGTTTTTAGATGTTTGGCAGGGACATTGCAGACCTGCGTGACTCAAAAAT
CGGCCCATGTCACGACTCGATTGGATGTCTTTTTTTCCTTCAGAATCGAA
AAGATCAATCGACGTCATTATTTTCCAATGAATATATCATTCGACTGTTT
GAGAACATTAATAATAATTATTACCTATGTGCGTCACACAATTCATCC back to topCoding sequence (CDS) from alignment at CM002465.1:233497..235194- >rna5139 ID=rna5139|Name=rna5139|organism=Nannochloropsis gaditana|type=CDS|length=1740bp|location=Sequence derived from alignment at CM002465.1:233497..235194- (Nannochloropsis gaditana)
TGTCGGTGTCCGCGACATTGTGGTCGTCTCCGAGAATGTACGAGACGCAG
CCTTGGTTCTAAACCTGCCGCCTTGCCAAAACGGCGTCCGGCTGCATAAG
TCGTTAGGTCTTCATCCTGAACATGCATGTCTAAAATCCTTGTCTACCGT
GCTAAACCTCATCCGAGAGAATCACACGAAGCTGGCCTGTGTGGGAGAAA
TCGGATTGGACTTCTCTCCGCACATCTTGGGACATGATGATGCCGAGGCT
GTCAAAGCATTGCAACGGGAGTGTATGAGACAACAAGTAGAGCTGGCATA
CGAACTTGATTTGCCCGTAAACGTGCATTCCCGGGGAGCGGGGCACCACG
CTTTGTCACTGCTGCGAGAAACAGTGTCAGCATCAAGCGTTGCAGACACG
CTAAAAACAACAGAGAGAGCCAGTAGTCAAACAAGAGCTAGGATGTATGA
AGGTCGGGTCCGCGCCGTGATGCACGCATGGGACGGAAAGGCTAAATACG
CAGCAGCGGCTGCTGCAGATTCCCAACAAAGCATTTATTTTTCGGTTCCT
CCCTGTGCGTCACGCAGTCCTGTCATGATCAAGTGGATTGAACGCTTGCC
ATTGGAAAGTCTGTTACTGGAAACAGATTGTCCAGCTTTGGCGGCTGTGA
AAGGAGAGGTCAACGTGCCTCGAAATTTGCAGCTGTCATTGCAAGTCATA
GGCGCACGTAAAGGAGTAGGACTGGATATTGTCCGAGAGATCACGCGGAA
AAATGCAGAGGAATTGTTCGGTTTGCAAGCCGGGAAGGAATGAATGTTTG
ATGTGCACGCCCACTTGACTGCGCAAGAATTATTGCCGGATCTAGACAGA
TTATTGACGGAAGCGTATAGTGTCGGTGTCCGCGACATTGTGGTCGTCTC
CGAGAATGTACGAGACGCAGCCTTGGTTCTAAACCTGCCGCCTTGCCAAA
ACGGCGTCCGGCTGCATAAGTCGTTAGGTCTTCATCCTGAACATGCATGT
CTAAAATCCTTGTCTACCGTGCTAAACCTCATCCGAGAGAATCACACGAA
GCTGGCCTGTGTGGGAGAAATCGGATTGGACTTCTCTCCGCACATCTTGG
GACATGATGATGCCGAGGCTGTCAAAGCATTGCAACGGGAGTGTATGAGA
CAACAAGTAGAGCTGGCATACGAACTTGATTTGCCCGTAAACGTGCATTC
CCGGGGAGCGGGGCACCACGCTTTGTCACTGCTGCGAGAAACAGTGTCAG
CATCAAGCGTTGCAGACACGCTAAAAACAACAGAGAGAGCCAGTAGTCAA
ACAAGAGCTAGGATGTATGAAGGTCGGGTCCGCGCCGTGATGCACGCATG
GGACGGAAAGGCTAAATACGCAGCAGCGGCTGCTGCAGATTCCCAACAAA
GCATTTATTTTTCGGTTCCTCCCTGTGCGTCACGCAGTCCTGTCATGATC
AAGTGGATTGAACGCTTGCCATTGGAAAGTCTGTTACTGGAAACAGATTG
TCCAGCTTTGGCGGCTGTGAAAGGAGAGGTCAACGTGCCTCGAAATTTGC
AGCTGTCATTGCAAGTCATAGGCGCACGTAAAGGAGTAGGACTGGATATT
GTCCGAGAGATCACGCGGAAAAATGCAGAGGAATTGTTCGGTTTGCAAGC
CGGGAAGGAATGAATGTTTGATGTGCACGCCCACTTGACTGCGCAAGAAT
TATTGCCGGATCTAGACAGATTATTGACGGAAGCGTATAG back to top
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