EWM25551.1, cds5127 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM25551.1 vs. NCBI_GenBank
Match: gi|553187227|ref|XP_005854568.1| (dnase domain containing 3 [Nannochloropsis gaditana CCMP526] >gi|422294492|gb|EKU21792.1| dnase domain containing 3 [Nannochloropsis gaditana CCMP526] >gi|585107322|gb|EWM25551.1| dnase domain containing 3 [Nannochloropsis gaditana]) HSP 1 Score: 590.112 bits (1520), Expect = 0.000e+0 Identity = 289/289 (100.00%), Postives = 289/289 (100.00%), Query Frame = 0
Query: 1 MFDVHAHLTAQELLPDLDRLLTEAYSVGVRDIVVVSENVRDAALVLNLPPCQNGVRLHKSLGLHPEHACLKSLSTVLNLIRENHTKLACVGEIGLDFSPHILGHDDAEAVKALQRECMRQQVELAYELDLPVNVHSRGAGHHALSLLRETVSASSVADTLKTTERASSQTRARMYEGRVRAVMHAWDGKAKYAAAAAADSQQSIYFSVPPCASRSPVMIKWIERLPLESLLLETDCPALAAVKGEVNVPRNLQLSLQVIGARKGVGLDIVREITRKNAEELFGLQAGKE 289
MFDVHAHLTAQELLPDLDRLLTEAYSVGVRDIVVVSENVRDAALVLNLPPCQNGVRLHKSLGLHPEHACLKSLSTVLNLIRENHTKLACVGEIGLDFSPHILGHDDAEAVKALQRECMRQQVELAYELDLPVNVHSRGAGHHALSLLRETVSASSVADTLKTTERASSQTRARMYEGRVRAVMHAWDGKAKYAAAAAADSQQSIYFSVPPCASRSPVMIKWIERLPLESLLLETDCPALAAVKGEVNVPRNLQLSLQVIGARKGVGLDIVREITRKNAEELFGLQAGKE
Sbjct: 1 MFDVHAHLTAQELLPDLDRLLTEAYSVGVRDIVVVSENVRDAALVLNLPPCQNGVRLHKSLGLHPEHACLKSLSTVLNLIRENHTKLACVGEIGLDFSPHILGHDDAEAVKALQRECMRQQVELAYELDLPVNVHSRGAGHHALSLLRETVSASSVADTLKTTERASSQTRARMYEGRVRAVMHAWDGKAKYAAAAAADSQQSIYFSVPPCASRSPVMIKWIERLPLESLLLETDCPALAAVKGEVNVPRNLQLSLQVIGARKGVGLDIVREITRKNAEELFGLQAGKE 289
BLAST of EWM25551.1 vs. NCBI_GenBank
Match: gi|298707840|emb|CBJ30246.1| (TatD DNase domain containing 3 [Ectocarpus siliculosus]) HSP 1 Score: 216.083 bits (549), Expect = 6.986e-66 Identity = 133/292 (45.55%), Postives = 163/292 (55.82%), Query Frame = 0
Query: 1 MFDVHAHLTAQELLPDLDRLLTEAYSVGVRDIVVVSENVRDAALVLNLPPCQNG-------VRLHKSLGLHPEHACLKSLSTVLNLIRENHTKLACVGEIGLDFSPHILGH---DDAEAVKALQRECMRQQVELAYELDLPVNVHSRGAGHHALSLLRETVSASSVADTLKTTERASSQTRARMYEGRVRAVMHAWDGKAKYAAAAAADSQQSIYFSVPPCASRSPVMIKWIERLPLESLLLETDCPALAAVKGEVNVPRNLQLSLQVIGARKGVGLDIVREITRKNAEELF 282
MFD HAHLT L L + L EA + GV IV VSE++ DA V+ L N +RLH S+G+HPE A L + VL LI ++ + CVGE+GLDFS H++G + AE K +QRE R+Q A EL L VNVHSR AGHHA+SLL+E EG RAV+HA+DGK KYA AA + +FSVPP RSP ++ LPLESL+LETD PAL KG NVP NL +S I + KGV D+V E T NA LF
Sbjct: 1 MFDCHAHLTDSSLAEGLQQTLLEAEAAGVTGIVAVSESLDDATPVVELCASINDDASRCRKLRLHPSIGMHPEKADLHKVDDVLELIDKHADTIVCVGEVGLDFSRHLIGESGGERAERAKEVQREVFRRQARRAKELGLAVNVHSRSAGHHAISLLQE--------------------------EGITRAVLHAFDGKPKYAVQAA---KAGYFFSVPPIVCRSPGFQSLVKALPLESLVLETDSPALGPEKGVRNVPGNLSISRDWIASLKGVPADVVAETTTANARRLF 263
BLAST of EWM25551.1 vs. NCBI_GenBank
Match: gi|929765655|ref|XP_014157808.1| (hypothetical protein SARC_03865 [Sphaeroforma arctica JP610] >gi|906955035|gb|KNC83906.1| hypothetical protein SARC_03865 [Sphaeroforma arctica JP610]) HSP 1 Score: 173.711 bits (439), Expect = 5.138e-50 Identity = 104/234 (44.44%), Postives = 130/234 (55.56%), Query Frame = 0
Query: 56 RLHKS-----LGLHPEHACLKSLSTVLNLIRENHTKLACVGEIGLDFSPHILGHDDAEAVKALQRECMRQQVELAYELDLPVNVHSRGAGHHALSLLRETVSASSVADTLKTTERASSQTRARMYEGRVRAVMHAWDGKAKYAAAAAADSQQSIYFSVPPCASRSPVMIKWIERLPLESLLLETDCPALAAVKGEVNVPRNLQLSLQVIGARKGVGLDIVREITRKNAEELFGL 284
RLH S +GLHP A L+ L VL LIR+N L +GE GLDF+P +LG +D + VK +QR Q L+ ELDLP+NVHSR AGHHA+SLL+E G R V+HA+DGK KYA AA +FS+PP A RSP K I +LPL SLL+ETD PAL + NVP N ++ QVI KG+ + V T +NA +LF L
Sbjct: 15 RLHSSTVKACIGLHPTEANLEILPDVLALIRKNAHDLVGIGECGLDFTPKVLG-NDGDKVKQIQRHVFAAQAALSVELDLPLNVHSRCAGHHAISLLKEA--------------------------GVKRCVLHAFDGKPKYARQAA--ESMGYFFSIPPSAVRSPEKRKLISQLPLSSLLIETDSPALGPTSKDRNVPSNAVIACQVISEVKGISAEEVAHTTTENATKLFKL 219
BLAST of EWM25551.1 vs. NCBI_GenBank
Match: gi|546305107|ref|XP_005712537.1| (unnamed protein product [Chondrus crispus] >gi|515796154|emb|CDF77498.1| unnamed protein product [Chondrus crispus]) HSP 1 Score: 169.474 bits (428), Expect = 1.209e-47 Identity = 108/290 (37.24%), Postives = 153/290 (52.76%), Query Frame = 0
Query: 1 MFDVHAHLTAQELLPDLDRLLTEAYSVGVRDIVVVSENVRDAALVLNLPPCQNGVRLHKSLGLHPEHACL-------KSLSTVLNLIRENHTKLACVGEIGLDFSPHILGHDDAEAV-KALQRECMRQQVELAYELDLPVNVHSRGAGHHALSLLRETVSASSVADTLKTTERASSQTRARMYEGRVRAVMHAWDGKAKYAAAAAADSQQSIYFSVPPCASRSPVMIKWIERLPLESLLLETDCPALAAVKGEVNVPRNLQLSLQVIGARKGVGLDIVREITRKNAEELF 282
M D HAHLT+ + DL +LT A + G+ I+ VSE + DA VLNL G LH +LGLHPEH +LS + +L++ T +GE+GLD++P +L + A K LQ + + ++ +L LP++VHSR AGHHAL+ + E + VA MHA+DG+A +A A + +YFSVPP R + K + R+P E LLLE+D PALA +GE N P NL + ++I KGV + VR+ +N E LF
Sbjct: 1 MIDTHAHLTSPAFISDLPIVLTRARTTGISSIICVSETLSDAHAVLNLTAAHPGF-LHPALGLHPEHVTTLAPAQLSAALSGITSLLQT--TPAVAIGEVGLDYTPRVLSLAASAADAKRLQADAFAHFLSMSQQLALPLSVHSRAAGHHALAHVVEAARRAPVA-----------------------VCMHAFDGRAVHAERALRSVPEGLYFSVPPSVVRDDQLRKLVRRVPTERLLLESDAPALAPSRGERNEPANLVRAAEIIAEVKGVDVAAVRQTLAENTERLF 264
BLAST of EWM25551.1 vs. NCBI_GenBank
Match: gi|1126216582|ref|XP_019642309.1| (PREDICTED: putative deoxyribonuclease TATDN3 isoform X1 [Branchiostoma belcheri]) HSP 1 Score: 162.925 bits (411), Expect = 3.708e-45 Identity = 103/291 (35.40%), Postives = 153/291 (52.58%), Query Frame = 0
Query: 2 FDVHAHLTAQELLPDLDRLLTEAYSVGVRDIVVVSENVRDAALVLNLPPCQNGVRLHKSLGLHPEHA---------CLKSLSTVLNLIRENHTKLACVGEIGLDFSP-HILGHDDAEAVKALQRECMRQQVELAYELDLPVNVHSRGAGHHALSLLRETVSASSVADTLKTTERASSQTRARMYEGRVRAVMHAWDGKAKYAAAAAADSQQSIYFSVPPCASRSPVMIKWIERLPLESLLLETDCPALAAVKGEVNVPRNLQLSLQVIGARKGVGLDIVREITRKNAEELF 282
D H H++A+E DLD ++T A G+ IV V+E +A +L+L + LG+HP A L+ L V +I +N KL +GE+GLDF+P ++ G D K +QR+ +Q++LA + DLPVNVHSR AG + LL+E +G + ++HA+DGK A Q +FSVPPC RS K ++ +PL++L+LETD PAL VK E N P N+++S + I KGV ++ V ++T +NA +LF
Sbjct: 5 IDCHCHISAEEFNEDLDEVITRAKEAGISAIVAVAEFPSEAPRILSLSEKYKDF-IFPCLGVHPVQAEPPDSQRSVTLEDLGQVEPVIGDNVEKLVGIGEVGLDFTPFNVKGDSD----KDVQRQVFARQIDLAKKHDLPVNVHSRSAGRPVIQLLKE--------------------------QGATKVLLHAFDGKVSVALQGV---QSGYFFSVPPCIVRSEQKQKLVKAIPLDNLMLETDSPALGPVKMERNEPMNIKVSCEHIARIKGVSMETVMQVTTQNALKLF 261
BLAST of EWM25551.1 vs. NCBI_GenBank
Match: gi|1183336377|gb|ORX65448.1| (Mg-dependent DNase [Anaeromyces robustus]) HSP 1 Score: 159.844 bits (403), Expect = 8.231e-44 Identity = 100/299 (33.44%), Postives = 154/299 (51.51%), Query Frame = 0
Query: 1 MFDVHAHLTAQELLP-DLDRLLTEAYSVGVRDIVVVSENVRDAALVLNLPPCQNGVRLHKSLGLHP----------------EHACLKSLSTVLNLIRENHTKLACVGEIGLDFSPHILGHDDAEAVKALQRECMRQQVELAYELDLPVNVHSRGAGHHALSLLRETVSASSVADTLKTTERASSQTRARMYEGRVRAVMHAWDGKAKYAAAAAADSQQSIYFSVPPCASRSPVMIKWIERLPLESLLLETDCPALAAVKGEVNVPRNLQLSLQVIGARKGVGLDIVREITRKNAEELF 282
FD HAH+ + +++ ++ +A V+ I+ V+E D VLN+ + + L +GLHP + L + VL+LI+E+ ++ C+GE+GLD+SP L + E K +Q++ +Q+ELA EL++P+NVHSR AGH+A+ L E +A +V V+HA+DGK YA Q YFS+PP RSP K + LPL+ +LLETD PAL+ K +N P N+ +S + I K + ++ V IT +NA +LF
Sbjct: 5 FFDCHAHINSPSFSKENIEIIVNKAKEKNVKGIISVAETYEDCLDVLNVAKQYSKIIL-PGIGLHPIQPLVDENGQRLDKGGRSSTLDEVYPVLDLIKEHQKEIVCIGEVGLDYSPQFL--KNVEEEKIIQKQIFEKQIELANELNIPLNVHSRSAGHYAIETLIEK-NAKNV-------------------------VLHAFDGKPGYAQKGL---QAGFYFSIPPSIKRSPQKQKLVNILPLDRILLETDSPALSPEKNTINEPSNVIISCEEIARIKNISIEEVARITNENALKLF 271
BLAST of EWM25551.1 vs. NCBI_GenBank
Match: gi|1040191607|ref|XP_017203282.1| (PREDICTED: putative deoxyribonuclease TATDN3 isoform X1 [Oryctolagus cuniculus]) HSP 1 Score: 159.458 bits (402), Expect = 1.020e-43 Identity = 103/291 (35.40%), Postives = 149/291 (51.20%), Query Frame = 0
Query: 1 MFDVHAHLTAQELLPDLDRLLTEAYSVGVRDIVVVSENVRDAALVLNLPPCQNGVRLHKSLGLHP---------EHACLKSLSTVLNLIRENHTKLACVGEIGLDFSPHILGHDDAEAVKALQRECMRQQVELAYELDLPVNVHSRGAGHHALSLLRETVSASSVADTLKTTERASSQTRARMYEGRVRAVMHAWDGKAKYAAAAAADSQQSIYFSVPPCASRSPVMIKWIERLPLESLLLETDCPALAAVKGEVNVPRNLQLSLQVIGARKGVGLDIVREITRKNAEELF 282
+ D H HL+A + DLD +L EA V V +V V+E+ R+ ++ L NG L LG+HP LK L L +I +L +GE+GLDF+P G D+ K QR+ + +QV+LA L+LP+NVHSR AG +SLLRE +G + ++HA+DG+ A + +FS+PP RS K +++LPL S+ LETD PAL VK N PRN+ +S + I KG+ ++ V E+T +NA +LF
Sbjct: 8 LVDCHCHLSAPDFDHDLDDVLEEAKKVNVMALVAVAEHSREFEKIMQLSERYNGFVL-PCLGVHPVQELPSEDQRSVTLKDLEVALPIIERYKDRLLAIGEVGLDFTPRFAGTDEQ---KEEQRQVLIKQVQLAKRLNLPLNVHSRSAGRPTVSLLRE--------------------------QGADKVLLHAFDGRPSVAMEGV---RAGYFFSIPPSIIRSGQKQKLVKQLPLTSICLETDSPALGPVKQVRNEPRNISISAEYIAQVKGISVEEVIEVTTQNAMKLF 265
BLAST of EWM25551.1 vs. NCBI_GenBank
Match: gi|919057813|ref|XP_013410769.1| (PREDICTED: putative deoxyribonuclease TATDN3 isoform X1 [Lingula anatina]) HSP 1 Score: 157.532 bits (397), Expect = 4.035e-43 Identity = 103/292 (35.27%), Postives = 147/292 (50.34%), Query Frame = 0
Query: 1 MFDVHAHLTAQELLPDLDRLLTEAYSVGVRDIVVVSENVRDAALVLNLP--------PCQNGVRLHKSLGLHPEH--ACLKSLSTVLNLIRENHTKLACVGEIGLDFSPHILGHDDAEAVKALQRECMRQQVELAYELDLPVNVHSRGAGHHALSLLRETVSASSVADTLKTTERASSQTRARMYEGRVRAVMHAWDGKAKYAAAAAADSQQSIYFSVPPCASRSPVMIKWIERLPLESLLLETDCPALAAVKGEVNVPRNLQLSLQVIGARKGVGLDIVREITRKNAEELF 282
+ D H HL A+E D+D ++T+ G+ VVV E+ + VL+L PC + +H G +P ACL+ L I ++H K+ +GE+GLDF+P + K QR +Q+++A + DLPVNVHSR AG+HA++LL+E +G +A++HA+ G+A A Q YFS PP RS K + RLPL+ +LLETD PA KGE NVP N+ LS + I K V + V IT +NA +LF
Sbjct: 4 VIDAHCHLAAEEFDEDIDDVITKGKEAGIAAAVVVPEHFGEFQKVLDLAERYPDFIAPC---LGVHPVQGSNPNERSACLEDLDEANPFIEKHHDKIVGIGEVGLDFTPWYIKMPQN---KEDQRNVFIKQIDIAKKYDLPVNVHSRSAGNHAITLLKE--------------------------QGVSKALLHAFSGRASVAMEGV---QAGYYFSFPPVIVRSEQKQKLLARLPLDCMLLETDSPACGPEKGERNVPANITLSCEYIAQVKKVDKETVMRITTENALKLF 260
BLAST of EWM25551.1 vs. NCBI_GenBank
Match: gi|632973556|ref|XP_007903211.1| (PREDICTED: putative deoxyribonuclease TATDN3 [Callorhinchus milii]) HSP 1 Score: 157.147 bits (396), Expect = 8.139e-43 Identity = 100/289 (34.60%), Postives = 148/289 (51.21%), Query Frame = 0
Query: 3 DVHAHLTAQELLPDLDRLLTEAYSVGVRDIVVVSENVRDAALVLNLPPCQNGVRLHKSLGLHP---------EHACLKSLSTVLNLIRENHTKLACVGEIGLDFSPHILGHDDAEAVKALQRECMRQQVELAYELDLPVNVHSRGAGHHALSLLRETVSASSVADTLKTTERASSQTRARMYEGRVRAVMHAWDGKAKYAAAAAADSQQSIYFSVPPCASRSPVMIKWIERLPLESLLLETDCPALAAVKGEVNVPRNLQLSLQVIGARKGVGLDIVREITRKNAEELF 282
D H HL A + D+D ++ +A G+ +V V+E+ + ++ L +G L LG+HP A L+ L L LI + +L +GE+GLDF+P D A K QR+ + +Q+E+A +LDLP+NVHSR AG + LL+E +G R ++HA+DGK A A + +FS+PP RS K +++LPLES+ LETD PAL VK N P+N+ +S Q I KG+ ++ V E+T +NA LF
Sbjct: 10 DCHCHLAAPDFTTDIDAVIDQAKKAGILALVAVAEHSEEFERLMELSEKYSGFVL-PCLGVHPVQVDPSGEQRSATLQDLEAALPLIEKYKERLLAIGEVGLDFTPRFASTD---AQKNEQRQVLIRQIEIAKQLDLPLNVHSRSAGRPTIKLLKE--------------------------QGAERVLLHAFDGKPSVAMEAV---KAGFFFSIPPSIIRSEQKQKLVKQLPLESMCLETDSPALGPVKQVRNEPKNVLVSCQYIAQVKGIPVEKVMEVTTQNAFRLF 265
BLAST of EWM25551.1 vs. NCBI_GenBank
Match: gi|661182342|emb|CDH55300.1| (deoxyribonuclease tatdn3 isoform 1 [Lichtheimia corymbifera JMRC:FSU:9682]) HSP 1 Score: 157.532 bits (397), Expect = 8.185e-43 Identity = 105/316 (33.23%), Postives = 151/316 (47.78%), Query Frame = 0
Query: 1 MFDVHAHLTA--------------QELLPDLDRLLTEAYSVGVRDIVVVSENVRDAALVLNLPPCQNGVRLHKSLGLHPEHACLKSLSTVLN---------LIRE--NHTKLACVGEIGLDFSPHIL----GHDDAEAVKALQRECMRQQVELAYELDLPVNVHSRGAGHHALSLLRETVSASSVADTLKTTERASSQTRARMYEGRVRAVMHAWDGKAKYAAAAAADSQQSIYFSVPPCASRSPVMIKWIERLPLESLLLETDCPALAAVKGEVNVPRNLQLSLQVIGARKGVGLDIVREITRKNAEELFGLQAG 287
M DVHAH+ E P LD ++ A + + IV VSE++ DA + + + + + GLHP +N L+++ H K+ C+GE+GLDF+P IL G+ + +K +QR ++QV++A E +LPVNVHSR AGHHAL +L E K T + +MHA+DG+A Y A + YFS+ P RSP ++ +PL +LLLE+D PAL KG N P NL ++ + I K + LD V E T NA +LF G
Sbjct: 1 MIDVHAHINYSNFPRDNTVSGAGDDENKPTLDTMINHAKNASIEHIVAVSESIHDAHDIFEIAAASDNF-IWPARGLHPVQCDDNKDERSVNWNDFEMFEPLLQDAIQHKKICCIGEVGLDFTPRILANNSGNQTQDEIKDMQRAIFKRQVQMAMEANLPVNVHSRSAGHHALDILYEC----------KAT----------------KVIMHAFDGRASYTKKAV---EAGYYFSIAPIVVRSPQKQTLVKNVPLSNLLLESDAPALGPEKGVDNEPANLMMAAREIARIKEISLDQVIEATTSNARQLFSCWEG 286 The following BLAST results are available for this feature:
BLAST of EWM25551.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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