|
|
Properties
| Property Name | Value |
|---|
| Product | abc transporter g family member 7 |
| Orig transcript id | gnl|cribi|Naga_100130g13.10556.mrna |
| Orig protein id | gnl|cribi|Naga_100130g13.10556 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002465.1 | supercontig | CM002465.1:200702..203943 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna5132 ID=rna5132|Name=rna5132|organism=Nannochloropsis gaditana|type=mRNA|length=2184bp
TCGCTCCCTCCCTCCCTCCTTCCCGACGTCTTCGTCACCTTCAAATACGA
CCAGCCGGACGCCCTTCCTTCCTCCACCCCACCACGGCACCTGAAGCTCT
ACCTGGGCCCTTTATCCTCCAGCCTTGGCCTGTGGGAGTCTTGGGGCCTC
CCCGTGCACGCCTTCGCCTCCTTCGCCCAAGCCCTCCACGCGTCGCCCTA
TTCCCTCGACACCCACCTGACCGCCCTCCTCCCCCTCCTTCCTCCCCTGG
CCTTGTGCACGTACGACCCTTGCGGGGCCGGCGTCGACCAGGGTTTTAGG
GAGGGAGAGCGGGAGGGAGGGCGGGCACGCCTGTGGACGCTGCCTTCCCT
CTCCCTTCGTCCCACTGCCTCGCTGGATGTGCGGGTGACGTCACTCCCTT
GCCCTCCCTCCCTCCTTCCCTCCCTCCTGGATCTCCTCAAAAATCAGGAC
CTGTCCCCGTCCTTCTGGCGCGACCACTTCCTCCTCTCCGGGGCGGGGCA
AGAGAAGGTCTTGCAGGAGGCAGGGAGGGAGGGAGGGAGGGAGGAAGGGC
TGAGGGCGGTCTACGAATTCCTCCTCTCCTACCTCCTCCCCTCCTCCTCC
TCCTGCAAGCATTGGACCGAGGAGGCCCTTGTCGACGGGTTGCGGATCAC
GCTCTATCCCCCTGGTGGCGGGGAGGAGGGCGGCCAGGCATCCGTCGGGA
AAGACACGGGCACTTTCACCTGTGCTGCGGGCGTCGGCAAGGGTGGGAAA
GGGAAGGAATGGGCGACAATCAGGCGCGCTCGGGGGGAGGAGGTGGTGGG
GTTCGTAGGGGAAGGGAGGGAAGGAAGGGTGTCAGGAGGGAGGGAAGGAA
GGAGAGGGGCCAGGCGCGGCGATCGGGGGCGAAAGAGCACCTCTCGCGCC
ACCACGCCGGATGACGGCGGGGACAACCAGGGTCATAAAATGCCAACGAG
AAGAAGCCAGGAACAGGGCAAGAAGAAACGGGGCCGTCCCTCTAAGGTGG
CCACTGCCCCTTCTTCCTCCTCTTCCTCCTTTCCCTCCCCTTCCTCCCCC
CCTTCCCCACTCCCTCCCTCCCTCCTCACGGACGCCTACCCCGGACGGCC
CGAACCCCTGGGCCTCCACCTTCCAGACCGAGGGCGGCACGTGTGCCGGA
TCGCCGGCTGCGGCAACGAATACCGGTGGCCAGACTACCAGTGCAAGTTG
CACGGGGGCGGGCGCTGTCAATACCTGTGGTGGCTTCGGGGAAGGGGGGA
GGGAGGCCGTGGGGAGGGCCCGGACGGGGTCGGGCTTGTTCTGGCCTGCC
CCAAATTCCATCAGAGCAAGAATTCAAAGGGAGAGCTGCTCTGTGGGGAG
CACTGTCGCCTGACGGGGGCTGTGTACGGAGAAGTGTCACGGAAAGGAAA
GGGGCGAGGAGGGGAGGCGGGTGTTAAGAAGGGGAAGAAAATGAAGACGA
AGGAGTAGCGGTTGTTTTCCATAGGAGACAAGTAGTTGTTTGGATTGGTA
GCATTTGACTGGGGGGGTGGGAACGTGAGCCTGAGGCTCGTGTCTTGAGA
TGAGGGAAAAAGGGGGACGAGTATACTTAAGAAGGAGTGACGGTGAAAGT
GCGAGAAACAGGAGCAATGACGCCATGTCCCCAGATTCCTTAGGCTTGTC
TTGCGAAGGAAAAAGACGGGGAGGGGAGTATCGGGATGGGAGAATGTGGG
ACACACTGTTTGATAGCTGACCCGGGAGGGGGGGGGGGAGATTGTTGAAT
AGGCGTATATTGGTTATGTTTGTGGTGGCGTGGTTATCTTTGGACGCGGG
GACGTCACGTGGGCGTGGCCCAAGGGGTGCCTAAGGTAAGCTGTTGACAA
GAGACGCGAGCATGGCACAAATAGCCCTTTTCGACGTGGGGAGGGGAATC
GTTTAGGGAAAGAAATCGACTCGGTATCAGGGATGCACTTGTGAATAGAC
AAGGCGAGGCACCGATGGCAGCAGAGAAAAGGAACATCTGGGAGTCTGCG
TGAATTTCGAGGGTTACCCTTCCTTGGTATTCTTTTCCTTGATCGTCCGC
GGTCGTATTTCTCTCCCCCGTGGCTGCCACTTGTAGAATGGATGGACAGG
AGTCAAGACGTGACCTGCGCTCCTAGCAGCATTCGTCTATTTTCTTTTGT
TGTTCAGCGTCACTATTAAATTTGGGGAATTTAA back to topprotein sequence of rna5132 >rna5132-protein ID=rna5132-protein|Name=rna5132|organism=Nannochloropsis gaditana|type=polypeptide|length=874bp
MPASTFFFTFSLFPIISTPFGRLRLCQLSCRFIPILLLVVLYPRALLAAL
HTADNMVKQASPPATSTCCSRALRLEWEDLCCRTKSDKSSSGREILSHVS
GQAKPGRLLAIMGPSGSGKTTLLNTLSGQLPYSSSVRLTGQVFITEEDTG
SKDAADGSFAGVDVAIPGREGESGNSGFVFVKQEDLFYSQLTVRETLLFT
ARLRLSKRMKDGEKRAYVEEMMARMGLADVAETMVGDEKQRGISGGERKR
LSLACELMGNPSKIIFADEPTSGLDSFQSQSVVSRLKRLCHDPARHTVVV
SIHQPRNSVYAMFDDIILLSDGHVIYHGPAERATEHFARLGYVCPPEFNP
SEWMLDLVSVDHSSPSRRQESQQRVKELVRAYQEEKDTGETSAVSPPHLS
SQKQKLLRSYQLANSLSARRALREHHPSWFAQFCLLIARQWKQTSRDLFT
NGLRALTSVLLAGMFGSIFHRLGRGEDGISERSAVLMHTCINTAMIAMVK
TLNLFTRERVVVGREQTKKLYSTSSYVLSKVIGELPVDAFFPVVFGCILY
PMVGLQAHGQRFARFLGILVLQTLTSSALGLTIGSLCPSTEAALTLGPSI
MVVFILLSGQVGTSNSKIPPFLRWVQHISLIRWAFEALCLNEFQGLTFTV
PSRSPLRVLRRLLPPFLPPAFRRALPSPLVPLAGAEVLKRLDMDPARTSM
GRAVRAQSLILLGNYLLTYAGLRFHAPRFQPIMATSSPPASGHLPPSHST
ATPLPSLTPSPAGRDHPVESRACRTLRPPTALSPPPPSSSPLALSTTVGG
ARSEERRTPSLSSSVLSPSTPPPWWKRRRSRAISAPSPPVSASLPFSSGE
GGRKHSTLKDRTASWPKLFHPPPR back to topmRNA from alignment at CM002465.1:200702..203943- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna5132 ID=rna5132|Name=rna5132|organism=Nannochloropsis gaditana|type=mRNA|length=3242bp|location=Sequence derived from alignment at CM002465.1:200702..203943- (Nannochloropsis gaditana)
TGACTTCTCCGTTGGGGGAGCAGGCACTTATATCCAGACAGCAGTAATTA
CTATCTTACAACGTCTTTCTCACAGGTTGGTATGCGTCCCTGTGGCTAAA
TTGTCTTGGACTCTACATAAGCAGCTCGGTATTTAAGCCGTCGCCTGGAT
GCCCGCCTCCACCTTCTTTTTTACTTTTTCGCTATTCCCAATTATTTCAA
CACCATTTGGGCGACTCCGATTGTGCCAACTGTCTTGCCGCTTCATTCCA
ATTCTCCTTCTCGTGGTGCTGTATCCCCGCGCTCTGCTGGCTGCATTGCA
CACAGCAGATAACATGGTCAAGCAGGCCTCCCCCCCCGCCACCTCCACCT
GTTGCAGTAGAGCTCTTCGACTAGAATGGGAAGACCTGTGCTGTCGAACC
AAGTCAGATAAAAGCAGCTCTGGGAGGGAAATTTTGAGCCATGTGTCTGG
ACAAGCGAAACCGGGAAGATTGCTGGCCATTATGGGGCCGTCGGGGAGCG
GGAAAACGACCTTGCTCAACACCCTCTCAGGGCAGCTCCCTTACAGCTCC
TCCGTGCGACTTACAGGCCAAGTCTTTATCACGGAGGAAGACACGGGCTC
AAAAGACGCGGCGGACGGGAGTTTTGCGGGCGTTGATGTTGCCATCCCTG
GTAGGGAGGGGGAGAGCGGTAACTCGGGTTTCGTGTTTGTCAAACAGGAA
GACTTGTTCTACTCCCAACTGACCGTGCGGGAGACCCTCCTTTTCACGGC
CCGCCTCCGCCTTTCCAAGCGAATGAAAGACGGGGAGAAACGGGCCTACG
TGGAGGAAATGATGGCGCGCATGGGTCTTGCCGACGTGGCGGAGACGATG
GTGGGGGACGAGAAACAGCGCGGCATCTCCGGGGGGGAGCGAAAGCGCTT
GTCCTTAGCCTGCGAACTCATGGGGAACCCGAGCAAGATCATCTTTGCCG
ACGAGCCCACCAGCGGGTTGGATTCCTTCCAATCCCAAAGCGTTGTCTCG
CGCCTGAAACGCTTGTGCCACGATCCTGCCCGGCACACGGTCGTGGTCTC
CATCCACCAACCCCGCAACAGCGTGTACGCCATGTTCGACGACATCATCC
TCCTCAGCGACGGCCATGTCATCTACCACGGCCCTGCGGAGAGAGCCACC
GAACACTTTGCACGCCTCGGGTATGTGTGCCCGCCAGAATTCAATCCAAG
TGAATGGATGCTGGACTTGGTCTCGGTCGACCATTCCTCCCCGTCACGCC
GACAAGAAAGTCAACAGCGGGTCAAGGAACTGGTACGAGCGTACCAGGAA
GAAAAGGACACAGGAGAGACGTCCGCCGTCTCCCCCCCCCATCTGTCCAG
CCAGAAACAAAAGCTTTTGAGATCCTACCAGCTTGCCAACTCCCTGTCCG
CCCGCCGGGCCCTCCGTGAGCACCATCCTTCCTGGTTCGCGCAATTTTGC
CTCTTGATCGCCCGGCAATGGAAGCAGACGTCTCGAGATCTGTTCACCAA
TGGCCTCCGGGCGCTGACCTCGGTCCTGCTCGCGGGCATGTTTGGGTCCA
TCTTCCATCGGCTCGGCCGGGGAGAGGATGGGATCTCGGAGCGTTCCGCC
GTGCTCATGCACACCTGCATCAATACGGCGATGATCGCGATGGTTAAAAC
CTTGAACCTGTTCACGCGGGAGAGGGTGGTGGTCGGGCGGGAGCAGACCA
AGAAACTTTACAGCACGAGCAGCTACGTGTTGTCTAAGGTGATCGGAGAG
CTCCCCGTCGACGCCTTCTTCCCCGTCGTCTTTGGCTGCATCCTCTACCC
CATGGTCGGCCTCCAAGCCCATGGACAACGTTTCGCGCGCTTTTTGGGGA
TTCTGGTCCTCCAGACATTGACGTCCTCCGCCCTCGGACTCACCATCGGG
AGCCTCTGCCCCTCCACAGAAGCTGCCCTGACATTGGGACCGTCCATCAT
GGTCGTCTTCATCCTCCTTTCCGGTCAGGTCGGCACGAGCAACAGCAAGA
TCCCTCCTTTCTTAAGGTGGGTTCAACACATCTCACTGATCCGGTGGGCC
TTCGAAGCCCTCTGTCTCAATGAGTTCCAAGGGCTGACTTTCACAGTACC
CAGCCGCTCCCCGCTCCGTGTCCTCCGCCGGCTCCTGCCCCCCTTCCTCC
CCCCCGCCTTCCGTCGCGCCCTCCCTTCGCCGTTGGTGCCTCTTGCGGGC
GCTGAGGTCCTGAAACGCCTGGATATGGACCCGGCGCGCACCAGCATGGG
CCGGGCAGTGCGGGCACAAAGCCTCATTCTCCTCGGCAATTACCTGCTCA
CCTACGCGGGTCTGAGGTTCCATGCGCCGCGCTTTCAGCCCATCATGGCA
ACCTCCTCTCCGCCTGCATCTGGCCATTTGCCACCCTCCCATTCTACCGC
GACTCCCCTCCCCTCGCTCACTCCATCCCCAGCGGGCCGAGACCATCCAG
TCGAATCGCGTGCGTGCCGCACCCTGCGTCCACCTACGGCCCTGTCACCC
CCCCCTCCTTCTTCCTCGCCCTTGGCTTTGTCGACGACCGTGGGAGGGGC
TCGATCGGAAGAAAGGCGTACCCCGAGCCTGTCCTCTTCCGTTCTCTCCC
CCTCCACCCCTCCCCCTTGGTGGAAAAGACGCCGTTCCAGAGCGATTTCC
GCCCCCTCCCCCCCGGTTTCAGCCTCCCTACCGTTCTCTTCAGGAGAAGG
AGGACGAAAACATTCCACGCTGAAGGATAGGACGGCATCGTGGCCGAAAC
TTTTCCATCCACCACCGCGGTAGGTCATAGCAAATAGCCGGGTACAAGAA
GTTGTGAGAGCAAGCGCTGGATAGCCCGAGGCGCGAGGCCCGGCGATATT
GCTCTTGGCGCGGTAGGACAAATTGCTGTGAGTACACGGCTGAGTGCTGC
TTGGCTAGTCATGGGCCGTAGAAATATGCAAAAAGTGTACATTACATTCT
ACAGAAAGAGGGAGGAGAGAGATGAAGAGGGAAAGAAAAAGAGTGGGTAA
GGGAGGAACAGCGAGGAAGAGAAGGAAAAGGCAAGAAAGACTGTATCTGT
GAGTACAATAGACGAATTAAATTCCCCAAATTTAATAGTGACGCTGAACA
ACAAAAGAAAATAGACGAATGCTGCTAGGAGCGCAGGTCACGTCTTGACT
CCTGTCCATCCATTCTACAAGTGGCAGCCACGGGGGAGAGAAATACGACC
GCGGACGATCAAGGAAAAGAATACCAAGGAAGGGTAACCCTC back to topCoding sequence (CDS) from alignment at CM002465.1:200702..203943- >rna5132 ID=rna5132|Name=rna5132|organism=Nannochloropsis gaditana|type=CDS|length=2625bp|location=Sequence derived from alignment at CM002465.1:200702..203943- (Nannochloropsis gaditana)
ATGCCCGCCTCCACCTTCTTTTTTACTTTTTCGCTATTCCCAATTATTTC
AACACCATTTGGGCGACTCCGATTGTGCCAACTGTCTTGCCGCTTCATTC
CAATTCTCCTTCTCGTGGTGCTGTATCCCCGCGCTCTGCTGGCTGCATTG
CACACAGCAGATAACATGGTCAAGCAGGCCTCCCCCCCCGCCACCTCCAC
CTGTTGCAGTAGAGCTCTTCGACTAGAATGGGAAGACCTGTGCTGTCGAA
CCAAGTCAGATAAAAGCAGCTCTGGGAGGGAAATTTTGAGCCATGTGTCT
GGACAAGCGAAACCGGGAAGATTGCTGGCCATTATGGGGCCGTCGGGGAG
CGGGAAAACGACCTTGCTCAACACCCTCTCAGGGCAGCTCCCTTACAGCT
CCTCCGTGCGACTTACAGGCCAAGTCTTTATCACGGAGGAAGACACGGGC
TCAAAAGACGCGGCGGACGGGAGTTTTGCGGGCGTTGATGTTGCCATCCC
TGGTAGGGAGGGGGAGAGCGGTAACTCGGGTTTCGTGTTTGTCAAACAGG
AAGACTTGTTCTACTCCCAACTGACCGTGCGGGAGACCCTCCTTTTCACG
GCCCGCCTCCGCCTTTCCAAGCGAATGAAAGACGGGGAGAAACGGGCCTA
CGTGGAGGAAATGATGGCGCGCATGGGTCTTGCCGACGTGGCGGAGACGA
TGGTGGGGGACGAGAAACAGCGCGGCATCTCCGGGGGGGAGCGAAAGCGC
TTGTCCTTAGCCTGCGAACTCATGGGGAACCCGAGCAAGATCATCTTTGC
CGACGAGCCCACCAGCGGGTTGGATTCCTTCCAATCCCAAAGCGTTGTCT
CGCGCCTGAAACGCTTGTGCCACGATCCTGCCCGGCACACGGTCGTGGTC
TCCATCCACCAACCCCGCAACAGCGTGTACGCCATGTTCGACGACATCAT
CCTCCTCAGCGACGGCCATGTCATCTACCACGGCCCTGCGGAGAGAGCCA
CCGAACACTTTGCACGCCTCGGGTATGTGTGCCCGCCAGAATTCAATCCA
AGTGAATGGATGCTGGACTTGGTCTCGGTCGACCATTCCTCCCCGTCACG
CCGACAAGAAAGTCAACAGCGGGTCAAGGAACTGGTACGAGCGTACCAGG
AAGAAAAGGACACAGGAGAGACGTCCGCCGTCTCCCCCCCCCATCTGTCC
AGCCAGAAACAAAAGCTTTTGAGATCCTACCAGCTTGCCAACTCCCTGTC
CGCCCGCCGGGCCCTCCGTGAGCACCATCCTTCCTGGTTCGCGCAATTTT
GCCTCTTGATCGCCCGGCAATGGAAGCAGACGTCTCGAGATCTGTTCACC
AATGGCCTCCGGGCGCTGACCTCGGTCCTGCTCGCGGGCATGTTTGGGTC
CATCTTCCATCGGCTCGGCCGGGGAGAGGATGGGATCTCGGAGCGTTCCG
CCGTGCTCATGCACACCTGCATCAATACGGCGATGATCGCGATGGTTAAA
ACCTTGAACCTGTTCACGCGGGAGAGGGTGGTGGTCGGGCGGGAGCAGAC
CAAGAAACTTTACAGCACGAGCAGCTACGTGTTGTCTAAGGTGATCGGAG
AGCTCCCCGTCGACGCCTTCTTCCCCGTCGTCTTTGGCTGCATCCTCTAC
CCCATGGTCGGCCTCCAAGCCCATGGACAACGTTTCGCGCGCTTTTTGGG
GATTCTGGTCCTCCAGACATTGACGTCCTCCGCCCTCGGACTCACCATCG
GGAGCCTCTGCCCCTCCACAGAAGCTGCCCTGACATTGGGACCGTCCATC
ATGGTCGTCTTCATCCTCCTTTCCGGTCAGGTCGGCACGAGCAACAGCAA
GATCCCTCCTTTCTTAAGGTGGGTTCAACACATCTCACTGATCCGGTGGG
CCTTCGAAGCCCTCTGTCTCAATGAGTTCCAAGGGCTGACTTTCACAGTA
CCCAGCCGCTCCCCGCTCCGTGTCCTCCGCCGGCTCCTGCCCCCCTTCCT
CCCCCCCGCCTTCCGTCGCGCCCTCCCTTCGCCGTTGGTGCCTCTTGCGG
GCGCTGAGGTCCTGAAACGCCTGGATATGGACCCGGCGCGCACCAGCATG
GGCCGGGCAGTGCGGGCACAAAGCCTCATTCTCCTCGGCAATTACCTGCT
CACCTACGCGGGTCTGAGGTTCCATGCGCCGCGCTTTCAGCCCATCATGG
CAACCTCCTCTCCGCCTGCATCTGGCCATTTGCCACCCTCCCATTCTACC
GCGACTCCCCTCCCCTCGCTCACTCCATCCCCAGCGGGCCGAGACCATCC
AGTCGAATCGCGTGCGTGCCGCACCCTGCGTCCACCTACGGCCCTGTCAC
CCCCCCCTCCTTCTTCCTCGCCCTTGGCTTTGTCGACGACCGTGGGAGGG
GCTCGATCGGAAGAAAGGCGTACCCCGAGCCTGTCCTCTTCCGTTCTCTC
CCCCTCCACCCCTCCCCCTTGGTGGAAAAGACGCCGTTCCAGAGCGATTT
CCGCCCCCTCCCCCCCGGTTTCAGCCTCCCTACCGTTCTCTTCAGGAGAA
GGAGGACGAAAACATTCCACGCTGAAGGATAGGACGGCATCGTGGCCGAA
ACTTTTCCATCCACCACCGCGGTAG back to top
|