Naga_100130g13, gene4953 (gene) Nannochloropsis gaditana

Overview
NameNaga_100130g13
Unique Namegene4953
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002465.1:200702..203943 -

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100130g13
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002465.1supercontigCM002465.1:200702..203943 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0000166nucleotide binding
GO:0016787hydrolase activity
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL015ngnoL015Nannochloropsis gaditana (N. gaditana B-31)syntenic_region
ngnoL013ngnoL013Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO10G03290NO10G03290Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna5132rna5132-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna5132rna5132Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna5132

>rna5132-protein ID=rna5132-protein|Name=rna5132|organism=Nannochloropsis gaditana|type=polypeptide|length=874bp
MPASTFFFTFSLFPIISTPFGRLRLCQLSCRFIPILLLVVLYPRALLAAL
HTADNMVKQASPPATSTCCSRALRLEWEDLCCRTKSDKSSSGREILSHVS
GQAKPGRLLAIMGPSGSGKTTLLNTLSGQLPYSSSVRLTGQVFITEEDTG
SKDAADGSFAGVDVAIPGREGESGNSGFVFVKQEDLFYSQLTVRETLLFT
ARLRLSKRMKDGEKRAYVEEMMARMGLADVAETMVGDEKQRGISGGERKR
LSLACELMGNPSKIIFADEPTSGLDSFQSQSVVSRLKRLCHDPARHTVVV
SIHQPRNSVYAMFDDIILLSDGHVIYHGPAERATEHFARLGYVCPPEFNP
SEWMLDLVSVDHSSPSRRQESQQRVKELVRAYQEEKDTGETSAVSPPHLS
SQKQKLLRSYQLANSLSARRALREHHPSWFAQFCLLIARQWKQTSRDLFT
NGLRALTSVLLAGMFGSIFHRLGRGEDGISERSAVLMHTCINTAMIAMVK
TLNLFTRERVVVGREQTKKLYSTSSYVLSKVIGELPVDAFFPVVFGCILY
PMVGLQAHGQRFARFLGILVLQTLTSSALGLTIGSLCPSTEAALTLGPSI
MVVFILLSGQVGTSNSKIPPFLRWVQHISLIRWAFEALCLNEFQGLTFTV
PSRSPLRVLRRLLPPFLPPAFRRALPSPLVPLAGAEVLKRLDMDPARTSM
GRAVRAQSLILLGNYLLTYAGLRFHAPRFQPIMATSSPPASGHLPPSHST
ATPLPSLTPSPAGRDHPVESRACRTLRPPTALSPPPPSSSPLALSTTVGG
ARSEERRTPSLSSSVLSPSTPPPWWKRRRSRAISAPSPPVSASLPFSSGE
GGRKHSTLKDRTASWPKLFHPPPR
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Synonyms
Publications