rna510, rna510 (mRNA) Nannochloropsis gaditana

Overview
Namerna510
Unique Namerna510
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length774
Alignment locationCM002455.1:1279001..1279921 -

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Properties
Property NameValue
Productzinc finger matrin-type protein 2
Orig transcript idgnl|cribi|Naga_100096g19.971.mrna
Orig protein idgnl|cribi|Naga_100096g19.971
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002455.1supercontigCM002455.1:1279001..1279921 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100096g19gene491Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna510rna510-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM30163.1cds510Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna510 ID=rna510|Name=rna510|organism=Nannochloropsis gaditana|type=mRNA|length=774bp
ATGGAGCAGGGGGACGAGGAGCTCCTTTTTGAGCTAGTTGACGTGGAGAT
GTCGTACGGAAGCAGTACGGGGCCCTCTGAAAGGCGAGGCCTTCTACAAA
TAACTTCCAAACGTTTACGGTGGAAAGCAAGGCGTGAAGAAGACGAAGGG
ACAAATTTGACGGCAGATACAGATCTGGGAGAGGAATTGTATGAAGCAGA
AATTCCCTGCATTACTCTCCATGCGATCTCGAAGGATCCCTCCTCGTTTC
CAAAGCCGTGCTTGTACTGCCAGATTTCTGAAGGCGGTGAAGACGAGGAC
GAGGACGCCTCGAAAGAAGTGTATTTTGTTCCAGAGGACCCGGAAAGCTT
GGGCCCCCTTTTCGAAGCATTATCTCGGGCCGCCCTTATGAATCCCGATC
CCCCTGAGGCCGGTGAGAATGAAGGGGATGATGAGTTGATCTTTGATCAA
ACCTCCACTGACGGCGCGAGTGGAGCCAGCGAGGAGCAGTACGAGGCCAT
CAAGGAAATGTGCAGGCTGTGTGGCTTCTCGCATGGGCAGCATCGATGTA
TTGACTTGTCTTCTACCGTACGTCTATGGGTTTACGCTCAGGGCCGCATG
CTGGCCCATCTTGAAGGCCTCCTGACCTTTTCTCCAAATCTGGTAGCAGC
CAGCGGCCAATTTGACGATGTCGACGAGGCGGAAGGTGCGGCATCAGGTG
GAGGGGACCAGGGGCAAGATGGAGGGCGGGGAGAGGGAGGGATGAATGGG
CATGGCGCAGACACGACTCAATAA
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protein sequence of rna510

>rna510-protein ID=rna510-protein|Name=rna510|organism=Nannochloropsis gaditana|type=polypeptide|length=233bp
MADDEQKKKKIPTGALNVERRTWDLEHFEKIAKERLEKEASGDVEKKKPG
FVRKREEFQAAEAGAAGPEGSKRAYLKHREADLGLEEKVGKIQVVTGSSA
PHQQGGYWCDICQCLLKDSMAYLDHINGKKHQKALGYSMRVERVGVDRVK
ERLNALKRREDEKKKAGPRESAIDAYQKKLEKDEAIKAQWKEARKEARIN
VIQRATKEEESTVEEEGGVDPEMAALMGFGGFK
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mRNA from alignment at CM002455.1:1279001..1279921-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna510 ID=rna510|Name=rna510|organism=Nannochloropsis gaditana|type=mRNA|length=921bp|location=Sequence derived from alignment at CM002455.1:1279001..1279921- (Nannochloropsis gaditana)
ATGGCTGACGATGAACAGAAGAAGAAAAAAATCCCCACGGGAGCATTGAA
CGTGGAGCGTCGGACCTGGGACCTCGAGCATTTTGAGAAGATAGCCAAGG
AACGCCTGGAGAAGGTCCGTTGAAGACTCAAATGGATGCGAGGGATAAAA
TACGACCCTCTAGCGACACATATGCATCTGATTCAAAGCCCAGACTATCT
GGGTGAAGGCCTTTCCGTTTGCTTCATTTTGCACGACCGATGCCTTCTTA
TTTTCTACTGACACACCACTTATCCCCTCTCCTTGATGCGGGGGAATCAT
CTCCATCTTCCCTGCCCATCCTTGTACAACCAGGAAGCATCAGGAGATGT
TGAGAAGAAGAAGCCGGGATTTGTGAGGAAACGAGAAGAGTTTCAAGCGG
CGGAGGCAGGCGCGGCAGGGCCTGAGGGCTCGAAGAGGGCTTACCTAAAG
CATCGAGAAGCCGACCTGGGCCTGGAGGAAAAAGTGGGGAAAATCCAAGT
TGTCACGGGAAGCTCAGCCCCCCACCAACAAGGCGGCTACTGGTGTGACA
TTTGTCAATGTTTGCTCAAAGACTCGATGGCTTACTTGGACCACATCAAC
GGGAAGAAGCATCAGAAAGCCCTGGGTTACAGCATGCGGGTGGAGAGGGT
GGGGGTGGACCGTGTGAAAGAGCGTCTGAATGCCTTGAAACGACGAGAAG
ATGAGAAGAAGAAGGCGGGCCCTCGTGAAAGTGCCATTGATGCGTACCAA
AAAAAGCTGGAGAAAGATGAAGCAATTAAAGCACAGTGGAAAGAGGCAAG
GAAAGAAGCCCGAATTAATGTTATTCAGCGGGCAACAAAAGAGGAGGAAA
GTACGGTTGAGGAAGAAGGTGGTGTAGATCCTGAAATGGCGGCATTGATG
GGTTTTGGAGGTTTTAAGTGA
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Coding sequence (CDS) from alignment at CM002455.1:1279001..1279921-

>rna510 ID=rna510|Name=rna510|organism=Nannochloropsis gaditana|type=CDS|length=1404bp|location=Sequence derived from alignment at CM002455.1:1279001..1279921- (Nannochloropsis gaditana)
GAAGCATCAGGAGATGTTGAGAAGAAGAAGCCGGGATTTGTGAGGAAACG
AGAAGAGTTTCAAGCGGCGGAGGCAGGCGCGGCAGGGCCTGAGGGCTCGA
AGAGGGCTTACCTAAAGCATCGAGAAGCCGACCTGGGCCTGGAGGAAAAA
GTGGGGAAAATCCAAGTTGTCACGGGAAGCTCAGCCCCCCACCAACAAGG
CGGCTACTGGTGTGACATTTGTCAATGTTTGCTCAAAGACTCGATGGCTT
ACTTGGACCACATCAACGGGAAGAAGCATCAGAAAGCCCTGGGTTACAGC
ATGCGGGTGGAGAGGGTGGGGGTGGACCGTGTGAAAGAGCGTCTGAATGC
CTTGAAACGACGAGAAGATGAGAAGAAGAAGGCGGGCCCTCGTGAAAGTG
CCATTGATGCGTACCAAAAAAAGCTGGAGAAAGATGAAGCAATTAAAGCA
CAGTGGAAAGAGGCAAGGAAAGAAGCCCGAATTAATGTTATTCAGCGGGC
AACAAAAGAGGAGGAAAGTACGGTTGAGGAAGAAGGTGGTGTAGATCCTG
AAATGGCGGCATTGATGGGTTTTGGAGGTTTTAAGTGAATGGCTGACGAT
GAACAGAAGAAGAAAAAAATCCCCACGGGAGCATTGAACGTGGAGCGTCG
GACCTGGGACCTCGAGCATTTTGAGAAGATAGCCAAGGAACGCCTGGAGA
AGGAAGCATCAGGAGATGTTGAGAAGAAGAAGCCGGGATTTGTGAGGAAA
CGAGAAGAGTTTCAAGCGGCGGAGGCAGGCGCGGCAGGGCCTGAGGGCTC
GAAGAGGGCTTACCTAAAGCATCGAGAAGCCGACCTGGGCCTGGAGGAAA
AAGTGGGGAAAATCCAAGTTGTCACGGGAAGCTCAGCCCCCCACCAACAA
GGCGGCTACTGGTGTGACATTTGTCAATGTTTGCTCAAAGACTCGATGGC
TTACTTGGACCACATCAACGGGAAGAAGCATCAGAAAGCCCTGGGTTACA
GCATGCGGGTGGAGAGGGTGGGGGTGGACCGTGTGAAAGAGCGTCTGAAT
GCCTTGAAACGACGAGAAGATGAGAAGAAGAAGGCGGGCCCTCGTGAAAG
TGCCATTGATGCGTACCAAAAAAAGCTGGAGAAAGATGAAGCAATTAAAG
CACAGTGGAAAGAGGCAAGGAAAGAAGCCCGAATTAATGTTATTCAGCGG
GCAACAAAAGAGGAGGAAAGTACGGTTGAGGAAGAAGGTGGTGTAGATCC
TGAAATGGCGGCATTGATGGGTTTTGGAGGTTTTAAGTGAATGGCTGACG
ATGAACAGAAGAAGAAAAAAATCCCCACGGGAGCATTGAACGTGGAGCGT
CGGACCTGGGACCTCGAGCATTTTGAGAAGATAGCCAAGGAACGCCTGGA
GAAG
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Synonyms
Publications