EWM30163.1, cds510 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM30163.1 vs. NCBI_GenBank
Match: gi|585112820|gb|EWM30163.1| (zinc finger matrin-type protein 2 [Nannochloropsis gaditana]) HSP 1 Score: 470.7 bits (1210), Expect = 8.622e-168 Identity = 233/233 (100.00%), Postives = 233/233 (100.00%), Query Frame = 0
Query: 1 MADDEQKKKKIPTGALNVERRTWDLEHFEKIAKERLEKEASGDVEKKKPGFVRKREEFQAAEAGAAGPEGSKRAYLKHREADLGLEEKVGKIQVVTGSSAPHQQGGYWCDICQCLLKDSMAYLDHINGKKHQKALGYSMRVERVGVDRVKERLNALKRREDEKKKAGPRESAIDAYQKKLEKDEAIKAQWKEARKEARINVIQRATKEEESTVEEEGGVDPEMAALMGFGGFK 233
MADDEQKKKKIPTGALNVERRTWDLEHFEKIAKERLEKEASGDVEKKKPGFVRKREEFQAAEAGAAGPEGSKRAYLKHREADLGLEEKVGKIQVVTGSSAPHQQGGYWCDICQCLLKDSMAYLDHINGKKHQKALGYSMRVERVGVDRVKERLNALKRREDEKKKAGPRESAIDAYQKKLEKDEAIKAQWKEARKEARINVIQRATKEEESTVEEEGGVDPEMAALMGFGGFK
Sbjct: 1 MADDEQKKKKIPTGALNVERRTWDLEHFEKIAKERLEKEASGDVEKKKPGFVRKREEFQAAEAGAAGPEGSKRAYLKHREADLGLEEKVGKIQVVTGSSAPHQQGGYWCDICQCLLKDSMAYLDHINGKKHQKALGYSMRVERVGVDRVKERLNALKRREDEKKKAGPRESAIDAYQKKLEKDEAIKAQWKEARKEARINVIQRATKEEESTVEEEGGVDPEMAALMGFGGFK 233
BLAST of EWM30163.1 vs. NCBI_GenBank
Match: gi|1173929479|gb|OQR82703.1| (hypothetical protein ACHHYP_15603 [Achlya hypogyna]) HSP 1 Score: 157.147 bits (396), Expect = 2.970e-44 Identity = 98/221 (44.34%), Postives = 131/221 (59.28%), Query Frame = 0
Query: 14 GALNVERRTWDLEHFEKIAKERLEKEASGDVEKKKPGFVRKREEFQAAEAGAAGPEGSKRAYLKHREADLGLEEKVGKIQVVTGSSAPHQQGGYWCDICQCLLKDSMAYLDHINGKKHQKALGYSMRVERVGVDRVKERLN-ALKRREDEKKKAGPRESAIDAYQKKLEKDEAIKAQWKEARKEARINVIQRATKEEESTVEEEGGVDPEMAALMGFGGFK 233
G NV RRTWD F + K L + E K V +REEFQAA GAAGP GS RA+LK R + LEE VGK V+ + + GY+C++C+ LKDS++Y+DHINGK+H + LG+SMRVE+VGV+ VKERLN A KR+ D P A++AY+KKL + +A K+ +KEA+ + E+E M A+MGFGGF+
Sbjct: 6 GVANVTRRTWDKAFFAQ--KAALRANGLLETESKSTKAVSQREEFQAAPEGAAGPIGSARAFLKARTKQVELEENVGKTVVLKPTDDTAKATGYFCEVCEVTLKDSVSYIDHINGKRHLRRLGFSMRVEKVGVEAVKERLNMASKRKWDPSVAKKP--DAVEAYEKKLAEMDAEANLKKKLKKEAKKQQAAAPAPVDVFATEDEEA----MMAMMGFGGFQ 218
BLAST of EWM30163.1 vs. NCBI_GenBank
Match: gi|813157223|ref|XP_012201960.1| (hypothetical protein SPRG_07431 [Saprolegnia parasitica CBS 223.65] >gi|641533187|gb|KDO27182.1| hypothetical protein SPRG_07431 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 153.295 bits (386), Expect = 9.040e-43 Identity = 108/244 (44.26%), Postives = 146/244 (59.84%), Query Frame = 0
Query: 1 MADDEQKKKKIPTGALNVERRTWDLEHFEKIAKERLEKEASGDVEK--KKPGFVRKREEFQAAEAGAAGPEGSKRAYLKHREADLGLEEKVGKIQVVTGSSAPHQQGGYWCDICQCLLKDSMAYLDHINGKKHQKALGYSMRVERVGVDRVKERLN-ALKRREDEKKKAGPRESAIDAYQKKLEKDEA--------IKAQWKEARKEARINVIQRATKEEESTVEEEGGVDPEMAALMGFGGFK 233
MAD +K G NV RRTWD F + A R A+G +E+ K + +REEFQAA GAAGP GS RA+LK R + LEE VGK VV + + GY+C++C+ LKDS++Y+DHINGK+H + LG+SMRVE+VGV+ VKERLN A KR+ D P A++AY+KKL + +A K K+ ++EA +NV AT++EE+ M A+MGFGGF+
Sbjct: 1 MADAPKK------GVANVTRRTWDKAFFAQKAALR----ANGLLEEEVKSTKQISEREEFQAAPDGAAGPIGSSRAFLKARTKQVELEENVGKT-VVLKADETMKGTGYYCEVCEVTLKDSVSYIDHINGKRHLRRLGFSMRVEKVGVEAVKERLNLASKRKWDPTVTKKP--DAVEAYEKKLAEMDAEANLKKKQKKEAKKQQKEEAPVNVF--ATEDEEA-----------MMAMMGFGGFQ 218
BLAST of EWM30163.1 vs. NCBI_GenBank
Match: gi|567976967|gb|ETL27478.1| (hypothetical protein L916_18977 [Phytophthora parasitica] >gi|568036325|gb|ETM33937.1| hypothetical protein L914_18887 [Phytophthora parasitica] >gi|570314537|gb|ETO62485.1| hypothetical protein F444_19614 [Phytophthora parasitica P1976] >gi|570938313|gb|ETP03570.1| hypothetical protein F441_19483 [Phytophthora parasitica CJ01A1]) HSP 1 Score: 153.68 bits (387), Expect = 1.286e-42 Identity = 84/161 (52.17%), Postives = 107/161 (66.46%), Query Frame = 0
Query: 1 MADDEQKKKKIPTGALNVERRTWDLEHFEKIAKERLEKEASGDVEKKKPGFVRK--REEFQAAEAGAAGPEGSKRAYLKHREADLGLEEKVGKIQVVTGSSAPHQQGGYWCDICQCLLKDSMAYLDHINGKKHQKALGYSMRVERVGVDRVKERLNALKRR 159
MAD +K G NV R+TWD H+EK+A+ R E G +EK++ V K +EEFQAA GAAGP GS RA+LK R + LE VG ++VV S + GGY+C++C+C LKDS+AYLDHINGKKH + LGYSMRVER VD+VK RL + +R
Sbjct: 1 MADKSGSRK--GAGVANVTRQTWDRAHYEKLAQLRAE----GKLEKEETKKVIKSTKEEFQAANEGAAGPAGSARAFLKARTNKMSLESSVGTVKVVK-SDDVSKNGGYYCEVCECGLKDSVAYLDHINGKKHLRKLGYSMRVERSTVDQVKNRLQSASKR 154
BLAST of EWM30163.1 vs. NCBI_GenBank
Match: gi|567948320|gb|ETK74069.1| (hypothetical protein L915_19076 [Phytophthora parasitica]) HSP 1 Score: 153.68 bits (387), Expect = 1.328e-42 Identity = 84/161 (52.17%), Postives = 107/161 (66.46%), Query Frame = 0
Query: 1 MADDEQKKKKIPTGALNVERRTWDLEHFEKIAKERLEKEASGDVEKKKPGFVRK--REEFQAAEAGAAGPEGSKRAYLKHREADLGLEEKVGKIQVVTGSSAPHQQGGYWCDICQCLLKDSMAYLDHINGKKHQKALGYSMRVERVGVDRVKERLNALKRR 159
MAD +K G NV R+TWD H+EK+A+ R E G +EK++ V K +EEFQAA GAAGP GS RA+LK R + LE VG ++VV S + GGY+C++C+C LKDS+AYLDHINGKKH + LGYSMRVER VD+VK RL + +R
Sbjct: 1 MADKSGSRK--GAGVANVTRQTWDRAHYEKLAQLRAE----GKLEKEETKKVIKSTKEEFQAANEGAAGPAGSARAFLKARTNKMSLESSVGTVKVVK-SDDVSKNGGYYCEVCECGLKDSVAYLDHINGKKHLRKLGYSMRVERSTVDQVKNRLQSASKR 154
BLAST of EWM30163.1 vs. NCBI_GenBank
Match: gi|570968625|gb|ETP31744.1| (hypothetical protein F442_19433 [Phytophthora parasitica P10297]) HSP 1 Score: 153.295 bits (386), Expect = 1.512e-42 Identity = 84/161 (52.17%), Postives = 107/161 (66.46%), Query Frame = 0
Query: 1 MADDEQKKKKIPTGALNVERRTWDLEHFEKIAKERLEKEASGDVEKKKPGFVRK--REEFQAAEAGAAGPEGSKRAYLKHREADLGLEEKVGKIQVVTGSSAPHQQGGYWCDICQCLLKDSMAYLDHINGKKHQKALGYSMRVERVGVDRVKERLNALKRR 159
MAD +K G NV R+TWD H+EK+A+ R E G +EK++ V K +EEFQAA GAAGP GS RA+LK R + LE VG ++VV S + GGY+C++C+C LKDS+AYLDHINGKKH + LGYSMRVER VD+VK RL + +R
Sbjct: 1 MADKSGTRK--GAGVANVTRQTWDRAHYEKLAQLRAE----GKLEKEETKKVIKSTKEEFQAANEGAAGPAGSARAFLKARTNKMSLESSVGTVKVVK-SDDVSKNGGYYCEVCECGLKDSVAYLDHINGKKHLRKLGYSMRVERSTVDQVKNRLQSASKR 154
BLAST of EWM30163.1 vs. NCBI_GenBank
Match: gi|568006489|gb|ETL80745.1| (hypothetical protein L917_18797 [Phytophthora parasitica] >gi|970647985|gb|KUF87651.1| Zinc finger matrin-type protein 2 [Phytophthora nicotianae] >gi|970665008|gb|KUG01779.1| Zinc finger matrin-type protein 2 [Phytophthora nicotianae]) HSP 1 Score: 153.295 bits (386), Expect = 1.666e-42 Identity = 84/161 (52.17%), Postives = 107/161 (66.46%), Query Frame = 0
Query: 1 MADDEQKKKKIPTGALNVERRTWDLEHFEKIAKERLEKEASGDVEKKKPGFVRK--REEFQAAEAGAAGPEGSKRAYLKHREADLGLEEKVGKIQVVTGSSAPHQQGGYWCDICQCLLKDSMAYLDHINGKKHQKALGYSMRVERVGVDRVKERLNALKRR 159
MAD +K G NV R+TWD H+EK+A+ R E G +EK++ V K +EEFQAA GAAGP GS RA+LK R + LE VG ++VV S + GGY+C++C+C LKDS+AYLDHINGKKH + LGYSMRVER VD+VK RL + +R
Sbjct: 1 MADKSGSRK--GAGVANVTRQTWDRAHYEKLAQLRAE----GKLEKEETKKVIKSTKEEFQAANEGAAGPAGSARAFLKARTNKMSLESSVGTVKVVK-SDDLSKNGGYYCEVCECGLKDSVAYLDHINGKKHLRKLGYSMRVERSTVDQVKNRLQSASKR 154
BLAST of EWM30163.1 vs. NCBI_GenBank
Match: gi|675209519|ref|XP_008913644.1| (hypothetical protein PPTG_17522 [Phytophthora parasitica INRA-310] >gi|568086196|gb|ETN01089.1| hypothetical protein PPTG_17522 [Phytophthora parasitica INRA-310]) HSP 1 Score: 152.91 bits (385), Expect = 2.023e-42 Identity = 83/158 (52.53%), Postives = 107/158 (67.72%), Query Frame = 0
Query: 4 DEQKKKKIPTGALNVERRTWDLEHFEKIAKERLEKEASGDVEKKKPGFVRK--REEFQAAEAGAAGPEGSKRAYLKHREADLGLEEKVGKIQVVTGSSAPHQQGGYWCDICQCLLKDSMAYLDHINGKKHQKALGYSMRVERVGVDRVKERLNALKRR 159
D+ +K P G NV R+TWD H+EK+A+ R E G +EK++ V K +EEFQAA GAAGP GS RA+LK R + LE VG ++VV S + GGY+C++C+C LKDS+AYLDHINGKKH + LGYSMRVER VD+VK RL + +R
Sbjct: 3 DKSGSRKGP-GVANVTRQTWDRAHYEKLAQLRAE----GKLEKEETKKVIKSTKEEFQAANEGAAGPAGSARAFLKARTNKMSLESSVGTVKVVK-SDDVSKNGGYYCEVCECGLKDSVAYLDHINGKKHLRKLGYSMRVERSTVDQVKNRLQSASKR 154
BLAST of EWM30163.1 vs. NCBI_GenBank
Match: gi|953492098|emb|CEG45348.1| (zinc finger matrin-type protein 2 [Plasmopara halstedii]) HSP 1 Score: 153.68 bits (387), Expect = 4.705e-42 Identity = 93/189 (49.21%), Postives = 121/189 (64.02%), Query Frame = 0
Query: 14 GALNVERRTWDLEHFEKIAKERLEKEASGDVEKKKPGFV--RKREEFQAAEAGAAGPEGSKRAYLKHREADLGLEEKVGKIQVVTGSSAPHQQGGYWCDICQCLLKDSMAYLDHINGKKHQKALGYSMRVERVGVDRVKERL-NALKRREDEKKKAGPRESAIDAYQKKLEKDE----AIKAQWKEARK 195
G NV R+TWD H+EK+A+ R E G VEK+ V +EEFQ A+ AAGP GS RA+LK R A + LE VG ++VV S + GY+C++C+C LKDS+AYLDHINGKKH + LGYSMRVER VD+VK+RL +A KR+ D + A++ Y+KKL+ E +K Q KE RK
Sbjct: 65 GVSNVVRQTWDRAHYEKLAQLRAE----GGVEKETTKKVIHSSKEEFQTADESAAGPAGSARAFLKARTAKMSLETSVGTVKVVK-SDELSKNSGYYCEVCECSLKDSVAYLDHINGKKHLRKLGYSMRVERSTVDQVKDRLQSAAKRKWD--PLMTKKLDAMEEYEKKLKAAEEAEICLKRQKKEQRK 246
BLAST of EWM30163.1 vs. NCBI_GenBank
Match: gi|566010782|gb|ETI33693.1| (hypothetical protein F443_19654 [Phytophthora parasitica P1569]) HSP 1 Score: 151.754 bits (382), Expect = 6.076e-42 Identity = 84/161 (52.17%), Postives = 107/161 (66.46%), Query Frame = 0
Query: 1 MADDEQKKKKIPTGALNVERRTWDLEHFEKIAKERLEKEASGDVEKKKPGFVRK--REEFQAAEAGAAGPEGSKRAYLKHREADLGLEEKVGKIQVVTGSSAPHQQGGYWCDICQCLLKDSMAYLDHINGKKHQKALGYSMRVERVGVDRVKERLNALKRR 159
MAD +K G NV R+TWD H+EK+A+ R E G +EK++ V K +EEFQAA GAAGP GS RA+LK R + LE VG ++VV S + GGY+C++C+C LKDS+AYLDHINGKKH + LGYSMRVER VD+VK RL + +R
Sbjct: 1 MADKSGTRK--GAGVANVTRQTWDRAHYEKLAQLRAE----GKLEKEETKKVIKSTKEEFQAANEGAAGPAGSARAFLKARTNKMSLESSVGTVKVVK-SDDLSKNGGYYCEVCECGLKDSVAYLDHINGKKHLRKLGYSMRVERSTVDQVKIRLQSASKR 154 The following BLAST results are available for this feature:
BLAST of EWM30163.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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